G125800


Basic Information

Item Value
gene id G125800
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 20859599 ~ 20859991 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU169197
CACTACTTAGGGATCACGGCTGCATGATGACTTACTAAATTTACAAACGAGACTTAAAATGATTCAGTCAGACCACTGGATTTTTGACAAGATTGTTTGGCTGTTGtaacctgggtagctcacctggtagagctggtgcccatatacagaggtttacttcTCGATGCAAcggccgcaggttcaactcTGTTCtgtggtcctttgctgcatgtcattccccctctcccctttcatgtctacagctgtcctaaataaaggcctaaaatgcccaaaaaaataaagattgtttGGCTGTCTCAATCAAGACGGTCACTTAAGACTATTACTGTTGCATT
>TU169199
atatatatatatatatatatatatatatatatatatatatggttgcTAGAGTTCATTACACTACTTAGGGATCACGGCTGCATGATGACTTACTAAATTTACAAACGAGACTTAAAATGATTCAGTCAGACCACTGGATTTTTGACAAGATTGTTTGGCTGTTGtaacctgggtagctcacctggtagagctggtgcccatatacagaggtttacttcTCGATGCAAcggccgcaggttcaactcTGTTCtgtggtcctttgctgcatgtcattccccctctcccctttcatgtctacagctgtcctaaataaaggcctaaaatgcccaaaaaaataaagattgtttGGCTGTCTCAATCAAGACGGTCACTTAAGACTATTACTGTTGCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169197 False 335 lncRNA 0.43 1 20859599 20859933
TU169199 True 393 lncRNA 0.39 1 20859599 20859991

Neighbor

gene id symbol gene type direction distance location
dcaf6 NA coding downstream 8607 20824774 ~ 20850992 (-)
rpgra NA coding downstream 50366 20795717 ~ 20809233 (-)
srpx srpx,LOC102777533 coding downstream 67352 20775078 ~ 20792247 (-)
LOC120569295 grpr,LOC103352898,LOC100697445,LOC101071331,LOC101471274,LOC102795360 coding downstream 139836 20715586 ~ 20719763 (-)
LOC120569729 LOC103352860,LOC100709268 coding downstream 194715 20649268 ~ 20664884 (-)
rpl24 rpl24 coding upstream 1223 20861214 ~ 20865558 (-)
LOC120570677 NA coding upstream 3794 20863785 ~ 20863953 (-)
me3 me3,LOC103391678,LOC107389821 coding upstream 25658 20885649 ~ 20899445 (-)
ildr1b NA coding upstream 40983 20900974 ~ 20908154 (-)
ildr2 ildr2 coding upstream 51774 20911765 ~ 20927324 (-)
G125784 NA non-coding downstream 100374 20757707 ~ 20759225 (-)
G125720 NA non-coding downstream 146450 20710865 ~ 20713149 (-)
G125708 NA non-coding downstream 162359 20691897 ~ 20697240 (-)
G125703 NA non-coding downstream 172686 20686696 ~ 20686913 (-)
G125701 NA non-coding downstream 175189 20683895 ~ 20684410 (-)
G125839 NA non-coding upstream 50579 20910570 ~ 20910806 (-)
G125845 NA non-coding upstream 92941 20952932 ~ 20953578 (-)
G125848 NA non-coding upstream 114241 20974232 ~ 20976915 (-)
G125852 NA non-coding upstream 136501 20996492 ~ 20998787 (-)
G125855 tfdp1,LOC102791026 non-coding upstream 141318 21001309 ~ 21004378 (-)
LOC120570047 dynlt3 other downstream 121279 20734550 ~ 20738320 (-)
G125620 col4a2 other downstream 392414 20464109 ~ 20467185 (-)
G125619 col4a2 other downstream 397970 20459162 ~ 20461629 (-)
si:ch211-214p13.7 NA other downstream 935864 19921268 ~ 19923735 (-)
LOC120570223 NA other downstream 1063379 19790052 ~ 19796220 (-)
G125842 NA other upstream 93670 20953661 ~ 20960064 (-)
LOC120569741 LOC104951940,LOC103391685,LOC103352881 other upstream 119010 20979001 ~ 20986633 (-)
tmtops2b LOC100693281,LOC102294429,LOC102792754,LOC101463828,LOC102207603,LOC103352886 other upstream 251196 21111187 ~ 21149005 (-)
ecrg4a Augurin-B,LOC103352889 other upstream 332917 21192908 ~ 21198088 (-)
c12h2orf49 NA other upstream 416931 21276922 ~ 21279859 (-)

Expression


Co-expression Network