G125848


Basic Information

Item Value
gene id G125848
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 20974232 ~ 20976915 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU169262
ATGGCCGATGGATTGTATGAGGACAAAATAAACAGTCAGTCTCGttcattccattttatttactcCTTTAGAAAACAGTTCAAACAAACCATTAAAACCTGATTAAATGACTACATGGATATTTAGATGAGggagaagaacaaaaaaaacaaacatacaaaaacaaatattttcttcAACAACATCTAACAAAATGCATATTTATGCTAGTAACAGTACATGAAGGCTATGAGTGAGACAAATGTCCCAAACATGGCAGCACACAGTGTCACAGTGTGAGTGAATGAGACCGCTATGGTATTGGCTTTACTTTAACCCCATCAatgttacagctgagaaggcaCTGATGAACACTAACCAGAGCATTTTGGCCACTTAAATCATTACATGGGGCTTTTTGTTAGAAATTTAGTGCAACTTATTTcccttcagaaaaaaaaaaaaaatcccaagtGGGCCCATATTAagggaaaaataaaacaaacagccTAGCCGTGTGGTAATAAAAGAAAAACGAACAAAACCACCCAGTGGACTGTAACACTTTTACACCCTTACAGTGATGTCCTGAGCTTTTTCATCCACATAAGCCAACagtagtgttttttgtttaagCAACTTATGTTGCGTGTGAACATTGTAACAGCAGAAACCCAGAAAGTGTCTATAATCACTTAGAAAtagttttgacattttgggaaattcaCATGTGCCTAGAGttctcatgtctgtatggtaaatCTGAAAATATAGCCaggagacagttagcttagcataaagacttgaaacagggacagctagcatggctctgTCTAACGGTAACAAATCTGCCtcccagcacctctaaagctcattaataaacatcttatatcttgtttgtttaataccAAAACTGAAATGCCAAAACTTCACGTTGTGTTTTTAAGGAGGTTACGTGCCGAAATATTTCAAACGTGGTACACTTTGGTctttgtatggattaaacaaacgagatataacatgtaaatcagtgagctttagagaCGTCGGTAGGCCGATTTGTTACCTTTAGACAGAGCTATGCTAGTcgtttccagtctttttgcTACGCTAacctgctgctggctgtagcttcacattTAGCGAGAGttgtatcgatcttctcatccgactctcggcaagaaagcaaataagcatatttccctaATAGTTGAATTATTCCTTTAAATTAAGTGAAAAATCCTAAACAAATTATCCTACAAAGCTGACAACTGCATCTAAAGCCTCCATACATAATGTACTGAGTACATTTAAAAAGGGAAAGAATCCTATCATCACTAATCCCAGTGAACAAAATAAATTCCTTAATGCATCTTTACTTTAAAATGAGTATGTTAAGTAAAATCTGCATACTTgggctaaaaacaaaacaaaacatcagaTCCTTACTGTCTGAAGTGGATTAAGTTAAAGAGCTAGAAATATTCCCTTTATAATAACTTATACTACTTCATTAAGGGCAAGACCACTAAAAATGGTCACCCTAAAGCAGATAAACAATACGAAAAGCTACAGTAGCAATTCCCTCAACTCCCACAATCCCTCAAAGTTCCTTTTATAGAAATCATAAATAGTACAATACAATTTGAGAACTCTCATGAACCCTCTGATCCACATCCATGCCCGGCTTTACATAGTACCAGCACGTTTCTTTCCTCATTTCTTTACAATCTTCAAACAAGGCCCCTATTTTATAAATAAGGGTCAGTTCAGAATGAGCATATCAACCTCCACCAAGTGATAATGACTAGTGTTACTGATGAGGGCAaagaacagcacacacacacacacacaggcagggagGATGAGTGATGGAGAGATAGAGGGGGACAGGGTGGAGTGTTAAGTCTCATAAAACAGTGGTTAATCTCATGGGTGGGACAGCACCCTCTGGGAGTGTTAAGTGACCTCAGATGGTCTGGTAGCCAGCGTGGCTCCTCTTCCTGCCAATGAGGTAGGCCAAGAGCACGATGAGGACGAGACCTGCTAAAGCCGCTCCGACTATGATGGGGATCAACATGTCATCTTCATCCAACTGGCATTCCTCAGCTTAGAGAGTGAAAACACCAGAAAAGACAAATTGGAGCAAAAAAGCAATTTATTATTAATCACATTCTACCAGACGGAAGTGTTTACCTGCTCCAAACTGATCTTTGGTCAGGCCGAAAGGCTGCACCTGCACCTGGAAGATGTTGATGGACAAGTACTGGTCCACATTCAGAGTTTGTTCCTCACGGCACAAGTATGAGTACCCCAGGGTGCCCTGCAGGTAGTCCAGACTGTGGTTATGGGTTGAGAAGGGCTCTATAGCAGAGAACAGAACAGTGAGCGATTACAGGGGGGGTATAGAAAAACAATACTCCAGCCAATTAGcatgactagggctgggtattgccACCGATTTCAAAATGCTGTCTAGTATTGAGCAAGAACGCAGTGACCAGCCACCGCATACCGGGCTGCAATGGACAATTGCCCCGTTGGCCGGTCACTGTGTTCTTGCTCAATACTGGAATAATTTCAAAGATCTTTGTtcacatcagtctattagacacaaattaatggggaaatagggtccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169262 True 2619 lncRNA 0.40 2 20974232 20976915

Neighbor

gene id symbol gene type direction distance location
LOC120569994 NA coding downstream 6596 20960073 ~ 20967636 (-)
gpa33b NA coding downstream 40854 20927503 ~ 20933378 (-)
ildr2 ildr2 coding downstream 46908 20911765 ~ 20927324 (-)
ildr1b NA coding downstream 66078 20900974 ~ 20908154 (-)
me3 me3,LOC103391678,LOC107389821 coding downstream 74787 20885649 ~ 20899445 (-)
dcun1d2a LOC103352882,LOC103391684,LOC102206284,LOC101172367,LOC100692472 coding upstream 10054 20986969 ~ 20992931 (-)
mettl21cb LOC103352902,LOC101487552,LOC100703915,LOC102310197 coding upstream 35696 21012611 ~ 21017468 (-)
LOC120569351 NA coding upstream 42671 21019586 ~ 21023880 (-)
otos2 NA coding upstream 223409 21200324 ~ 21201686 (-)
LOC120570262 nck2,LOC102794784 coding upstream 234966 21211881 ~ 21257422 (-)
G125845 NA non-coding downstream 20654 20952932 ~ 20953578 (-)
G125839 NA non-coding downstream 63426 20910570 ~ 20910806 (-)
G125800 NA non-coding downstream 114241 20859599 ~ 20859991 (-)
G125784 NA non-coding downstream 215007 20757707 ~ 20759225 (-)
G125720 NA non-coding downstream 261083 20710865 ~ 20713149 (-)
G125852 NA non-coding upstream 19577 20996492 ~ 20998787 (-)
G125855 tfdp1,LOC102791026 non-coding upstream 24394 21001309 ~ 21004378 (-)
G125905 NA non-coding upstream 231871 21208786 ~ 21209743 (-)
G125930 NA non-coding upstream 330978 21307893 ~ 21308995 (-)
G125977 NA non-coding upstream 432419 21409334 ~ 21409966 (-)
G125842 NA other downstream 14168 20953661 ~ 20960064 (-)
LOC120570047 dynlt3 other downstream 235912 20734550 ~ 20738320 (-)
G125620 col4a2 other downstream 507047 20464109 ~ 20467185 (-)
G125619 col4a2 other downstream 512603 20459162 ~ 20461629 (-)
si:ch211-214p13.7 NA other downstream 1050497 19921268 ~ 19923735 (-)
LOC120569741 LOC104951940,LOC103391685,LOC103352881 other upstream 2086 20979001 ~ 20986633 (-)
tmtops2b LOC100693281,LOC102294429,LOC102792754,LOC101463828,LOC102207603,LOC103352886 other upstream 134272 21111187 ~ 21149005 (-)
ecrg4a Augurin-B,LOC103352889 other upstream 215993 21192908 ~ 21198088 (-)
c12h2orf49 NA other upstream 300007 21276922 ~ 21279859 (-)
LOC120570342 LOC103140352,LOC107099897,LOC102227411,LOC105927538,LOC107389789,LOC103368131 other upstream 429991 21406906 ~ 21409042 (-)

Expression


Co-expression Network