LOC120569264


Basic Information

Item Value
gene id LOC120569264
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 22478563 ~ 22480315 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU169762
TTAAGTCCCGCCCCTCGTATTATCCGCAGTATGTAATGTGCTGTTGCTTAAACGGACGAGGTTATCTGACCTATAGATTTAGataaacaggaaacaaacaaCCATGGTCTGACTGCTAATAAAAGCTAGTATCTACGTGGTTAGGAGGATTCAGGCTTCCATTGCTGCAGGAGAGCAACTGGAAAAGCCCATCATAACACCATGTAGTGCTATTGCCGAAAAGAGAGCGGGACATGAGTCGATAGGAAACGCCCCAGCGGCTGCACTGAGACCTAACCCTGATGAAGGTGTCAGTGGAGCAGCAGGCCCAGGGACGTCCTCGGAGACAGCTGTGCAGAAATGTGGCTCCTGATGTTAAACATTTTGCTGGACACCGGGATTTGGTCCCCACAACGgaaaaatataatttgttaTCTTTGTATTTTTGCATCACAAGACAAAAATACATTATCCTGGATGATttcatgtaggcctatatagcctacagaACCATCTACATTGAATTGGTCAACATTAATTTTGTCAAAACAAAAATTTTACAAACACACCCTTATTGACTACAATACAAAGAAAATGTTTCCACTGTTTTCCAGTGTCCATGTTGTACTCAGTGGCCAATGTCCAGGTCCCAATGACACATTCACACCTATTTcatggcagacattttgacttaccATAGGAAAAAAACAGGTGCGACCAATAACAATTTCTCTTTTACATTAAGGTTTCCTGATGAGCTACACACAGTATCATAGGCACCTGATTGTAAGAGAGCCGTTTATGTTATTACCTTTATTTGGTTAGTCAACATGTTCTTGGTAAGAAAGGCCTGTATTTATGTACTGCAGTGTTTGAAGGCTAACTCACCAACCTCCCTCCAGGGGCTGAGCAGGCCTGATGTTTCTGCTGTTGTatcaataaatgaataatacaGAAA
>XR_005640853.1
AGTCGGGGTTTTAAGTCCCGCCCCTCGTATTATCCGCAGTATGTAATGTGCTGTTGCTTAAACGGACGAGGTTATCTGACCTATAGATTTAGataaacaggaaacaaacaaCCATGGTCTGACTGCTAATAAAAGCTAGTATCTACGTGGTTAGGAGGATTCAGGCTTCCATTGCTGCAGGAGAGCAACTGGAAAAGCCCATCATAACACCATGTAGTGCTATTGCCGAAAAGAGAGCGGGACATGAGTCGATAGGAAACGCCCCAGCGGCTGCACTGAGACCTAACCCTGATGAAGGTGTCAGTGGAGCAGCAGGCCCAGGGACGTCCTCGGAGACAGCTGTGCAGAAATGTGGCTCCTGATGTTAAACATTTTGCTGGACACCGGGATTTGGTCCCCACAACGgaaaaatataatttgttaTCTTTGTATTTTTGCATCACAAGACAAAAATACATTATCCTGGATGATttcatgtaggcctatatagcctacagaACCATCTACATTGAATTGGTCAACATTAATTTTGTCAAAACAAAAATTTTACAAACACACCCTTATTGACTACAATACAAAGAAAATGTTTCCACTGTTTTCCAGTGTCCATGTTGTACTCAGTGGCCAATGTCCAGGTCCCAATGACACATTCACACCTATTTcatggcagacattttgacttaccATAGGAAAAAAACAGGTGCGACCAATAACAATTTCTCTTTTACATTAAGGTTTCCTGATGAGCTACACACAGTATCATAGGCACCTGATTGTAAGAGAGCCGTTTATGTTATTACCTTTATTTGGTTAGTCAACATGTTCTTGGTAAGAAAGGCCTGTATTTATGTACTGCAGTGTTTGAAGGCTAACTCACCAACCTCCCTCCAGGGGCTGAGCAGGCCTGATGTTTCTGCTGTTGTatcaataaatgaataatacaGAAAGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169762 False 937 lncRNA 0.42 3 22478567 22480305
XR_005640853.1 True 951 lncRNA 0.42 3 22478563 22480315

Neighbor

gene id symbol gene type direction distance location
impg2a impg2 coding downstream 38570 22410048 ~ 22439993 (-)
LOC120570135 abi3bp,LOC103371890 coding downstream 97938 22351021 ~ 22380625 (-)
dcbld2 dcbld2 coding downstream 187701 22272609 ~ 22290862 (-)
il1rapl1a il1rapl1 coding downstream 383748 21891529 ~ 22094815 (-)
LOC120570344 LOC104951866,LOC102081843,LOC102195874,LOC102294132 coding downstream 620240 21854648 ~ 21858323 (-)
atp6ap2 atp6ap2,renr coding upstream 1635 22481950 ~ 22490414 (-)
bcor bcor coding upstream 13327 22493642 ~ 22527364 (-)
LOC120570617 NA coding upstream 104575 22584890 ~ 22586891 (-)
tspan7b tspan7 coding upstream 112707 22593022 ~ 22615223 (-)
zgc:101559 LOC100710420,LOC104958630,LOC102797725,LOC103357227,LOC101463598 coding upstream 149378 22629693 ~ 22632693 (-)
G126212 NA non-coding downstream 90394 22387712 ~ 22388169 (-)
G126211 NA non-coding downstream 91781 22386295 ~ 22386782 (-)
G126208 NA non-coding downstream 95191 22382648 ~ 22383372 (-)
G126188 NA non-coding downstream 128504 22251931 ~ 22350059 (-)
G126182 NA non-coding downstream 213263 22227133 ~ 22265300 (-)
G126334 mycbp2 non-coding upstream 242811 22723126 ~ 22723591 (-)
G126341 fbxl3 non-coding upstream 253253 22733568 ~ 22737837 (-)
G126353 NA non-coding upstream 290397 22770712 ~ 22770920 (-)
G126486 itgbl1 non-coding upstream 1031227 23511542 ~ 23518025 (-)
G126489 itgbl1,LOC102787049 non-coding upstream 1053380 23533695 ~ 23535597 (-)
senp7 NA other downstream 6641 22442212 ~ 22471922 (-)
LOC120569718 LOC104941591 other downstream 243706 22230333 ~ 22234857 (-)
cracdla NA other downstream 1015766 21455212 ~ 21462797 (-)
LOC120570342 LOC103140352,LOC107099897,LOC102227411,LOC105927538,LOC107389789,LOC103368131 other downstream 1069521 21406906 ~ 21409042 (-)
c12h2orf49 NA other downstream 1198704 21276922 ~ 21279859 (-)
si:dkey-100n23.5 LOC103357194,LOC107389748,LOC106527133,LOC108232487,LOC102079199,LOC107091445,LOC103391942,LOC106962244,LOC103134722,LOC104958636 other upstream 51319 22531634 ~ 22582407 (-)
katnal1 katnal1,LOC106527129,LOC104958633 other upstream 135181 22615496 ~ 22629115 (-)
scel scel other upstream 175264 22655579 ~ 22665472 (-)
klf5b LOC104962226,LOC103357491 other upstream 481884 22962199 ~ 22967901 (-)
gpr18 gpr18 other upstream 629718 23110033 ~ 23123908 (-)

Expression


Co-expression Network