G126334 (mycbp2)


Basic Information

Item Value
gene id G126334
gene name mycbp2
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 22723126 ~ 22723591 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU169906
AAATATTTTAGCGAGTTAAACAGTACAGGTAAATTGTCACAGTGCAGACCTTGTCTTCTCCCTCGGGTGATGAAAGAAGGTTTTTCTCCTCTTGCTCTGGAGTGGGCTCTGCATCTCCACAGATAAGTTTTCCAAAGACCTGTGAGGTGATGAGGCGAAACACTCGGAGAGTCTCAGCCTCACAGTTCTTTTGCTGGGCCATGCTTGCTGAGATCTGTCCTAAAATCTTGATGCTCTCGCCCTCTTTCCAACCGAGAACCTTCACCTGGCgcaccctcagtgtgttctccGGACCTTTCAGTTCCACCTTGATCACATGGTGATCCCCTCCAGGAAGCTCACTTGTCACCCAGCCCATGTGACGCG

Function

symbol description
mycbp2 Enables ubiquitin-protein transferase activity. Acts upstream of or within several processes, including axonogenesis; habenula development; and regulation of pteridine metabolic process. Located in cytoplasm. Is expressed in several structures, including eye; heart; integument; liver; and testis. Orthologous to human MYCBP2 (MYC binding protein 2).

NR:

description
PREDICTED: E3 ubiquitin-protein ligase MYCBP2 isoform X11

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169906 True 366 lncRNA 0.50 2 22723126 22723591

Neighbor

gene id symbol gene type direction distance location
slain1a slain1 coding downstream 68141 22641141 ~ 22654985 (-)
wu:fc50b12 LOC106098708,LOC104958628,LOC108232414,LOC105941296 coding downstream 82051 22639505 ~ 22641075 (-)
kbtbd7 kbtbd7,LOC102797434 coding downstream 84881 22634565 ~ 22638245 (-)
zgc:101559 LOC100710420,LOC104958630,LOC102797725,LOC103357227,LOC101463598 coding downstream 90433 22629693 ~ 22632693 (-)
tspan7b tspan7 coding downstream 107903 22593022 ~ 22615223 (-)
cln5 cln5,LOC102794031 coding upstream 17062 22740653 ~ 22743701 (-)
acod1 acod1 coding upstream 24041 22747632 ~ 22750454 (-)
lmo7a LOC104962234 coding upstream 69071 22792662 ~ 22841138 (-)
uchl3 uchl3,LOC102792853 coding upstream 118515 22842106 ~ 22847730 (-)
gpr183a gpr183 coding upstream 396860 23120451 ~ 23123901 (-)
LOC120569264 NA non-coding downstream 242811 22478563 ~ 22480315 (-)
G126212 NA non-coding downstream 334957 22387712 ~ 22388169 (-)
G126211 NA non-coding downstream 336344 22386295 ~ 22386782 (-)
G126208 NA non-coding downstream 339754 22382648 ~ 22383372 (-)
G126188 NA non-coding downstream 373067 22251931 ~ 22350059 (-)
G126341 fbxl3 non-coding upstream 9977 22733568 ~ 22737837 (-)
G126353 NA non-coding upstream 47121 22770712 ~ 22770920 (-)
G126486 itgbl1 non-coding upstream 787951 23511542 ~ 23518025 (-)
G126489 itgbl1,LOC102787049 non-coding upstream 810104 23533695 ~ 23535597 (-)
G126510 upf3a,LOC102786442 non-coding upstream 959203 23682794 ~ 23690101 (-)
scel scel other downstream 57654 22655579 ~ 22665472 (-)
katnal1 katnal1,LOC106527129,LOC104958633 other downstream 94011 22615496 ~ 22629115 (-)
si:dkey-100n23.5 LOC103357194,LOC107389748,LOC106527133,LOC108232487,LOC102079199,LOC107091445,LOC103391942,LOC106962244,LOC103134722,LOC104958636 other downstream 140719 22531634 ~ 22582407 (-)
senp7 NA other downstream 251204 22442212 ~ 22471922 (-)
LOC120569718 LOC104941591 other downstream 488269 22230333 ~ 22234857 (-)
klf5b LOC104962226,LOC103357491 other upstream 238608 22962199 ~ 22967901 (-)
gpr18 gpr18 other upstream 386442 23110033 ~ 23123908 (-)
si:ch211-218d20.15 LOC104960513,LOC101470276,LOC102197480,LOC102292608,LOC107099189,LOC100692635 other upstream 1231255 23954846 ~ 23957206 (-)
cnga4 cnga4,LOC103356095 other upstream 1947631 24671222 ~ 24679011 (-)
G127032 neb other upstream 2975137 25698728 ~ 25701551 (-)

Expression


Co-expression Network