G126533


Basic Information

Item Value
gene id G126533
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 23709174 ~ 23710315 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU170234
cctcaatagctacagatgcagaaatggcacatcctaaggaaagctcattgtgggactggctctagtggctgtaattctgtaccaaggctgaatttcgggaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagttttaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggcctatataggtctatataaaagcatccaaagagcaccatgtcatgggacctttaaacggagctgacacttcgctgcaacacaaacaaaattatttattcacctctattcacacacattgaggcatattttgatttcgttttgattgaactgtatttttgaggaactgtaggtctacaaaattaattttacaagaaattcttcatagggaaaccaaaacccaaaagtagcctatagtatgaaaccattcataatgaaactaattgcatatttgcctcagtggcaaagttggcagccttgctgtgtgcatttgaatgttcttggcttttggaaaaataactccaaggctcGGTTATAGGGGAATTCAGAAAGAGGTGGCCCATTAATGCTGAGTAGCATACATGCTGCTAGATGGTACCCCTGTGGCCTGGACGGTcattttgaaatttatatgtgtaataactttgctaaataaaaaaaatacaatcctgctggtacctgacttttcctaaaatagtctgtattgtcatttaaaattgtttttaggctatatacattacacaaaaggcaaagaaaatacaataacttttacctattttggccattttcgcggttttgtttttaatcttttgcgtggttgaagatgcatcttggttgcttagtaataatcatagtctctgtcagagaaacgtaactagcagtctcgagtaacaagtgtgggcattaAGGTGGTAGcctaagtgggcagaagagagatagagaaagaggaagcagacgtgttgtagatgcaaccggagcagggTTGGTGGTTATttagtgtttcctctatgttgattggcaagtggcggtccgccaAGGTTAGATTTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170234 True 1142 lncRNA 0.39 1 23709174 23710315

Neighbor

gene id symbol gene type direction distance location
fgf14 fgf14 coding downstream 59559 23538738 ~ 23649615 (-)
nalcn nalcn coding downstream 215836 23398523 ~ 23493338 (-)
tmtc4 tmtc4 coding downstream 337743 23360478 ~ 23371431 (-)
zic5 zic5,LOC102789084 coding downstream 470029 23235022 ~ 23239145 (-)
si:ch211-184m13.4 LOC104962230,LOC100690478,LOC103357536,LOC101477149 coding downstream 568491 23139020 ~ 23140683 (-)
shox shox,mog-12 coding upstream 106697 23817012 ~ 23825813 (-)
si:ch211-269e2.1 LOC103357720 coding upstream 218218 23928533 ~ 23951691 (-)
med14 med14 coding upstream 247932 23958247 ~ 23973690 (-)
rpl8 rpl8,LOC106586796,LOC107595836 coding upstream 320126 24030441 ~ 24033769 (-)
cerkl cerkl coding upstream 378994 24089309 ~ 24125727 (-)
G126528 NA non-coding downstream 5154 23703270 ~ 23704020 (-)
G126526 NA non-coding downstream 9112 23699344 ~ 23700062 (-)
G126510 upf3a,LOC102786442 non-coding downstream 19073 23682794 ~ 23690101 (-)
G126489 itgbl1,LOC102787049 non-coding downstream 173577 23533695 ~ 23535597 (-)
G126486 itgbl1 non-coding downstream 191149 23511542 ~ 23518025 (-)
G126534 NA non-coding upstream 1672 23711987 ~ 23713270 (-)
G126535 NA non-coding upstream 3171 23713486 ~ 23713957 (-)
G126597 LOC101470276,LOC102292608,LOC102197480,LOC100692635,LOC103357839 non-coding upstream 243088 23953403 ~ 23954370 (-)
G126606 NA non-coding upstream 294744 24005059 ~ 24005660 (-)
G126673 NA non-coding upstream 468142 24178457 ~ 24180149 (-)
gpr18 gpr18 other downstream 585266 23110033 ~ 23123908 (-)
klf5b LOC104962226,LOC103357491 other downstream 741273 22962199 ~ 22967901 (-)
scel scel other downstream 1043702 22655579 ~ 22665472 (-)
katnal1 katnal1,LOC106527129,LOC104958633 other downstream 1080059 22615496 ~ 22629115 (-)
si:dkey-100n23.5 LOC103357194,LOC107389748,LOC106527133,LOC108232487,LOC102079199,LOC107091445,LOC103391942,LOC106962244,LOC103134722,LOC104958636 other downstream 1126767 22531634 ~ 22582407 (-)
si:ch211-218d20.15 LOC104960513,LOC101470276,LOC102197480,LOC102292608,LOC107099189,LOC100692635 other upstream 244531 23954846 ~ 23957206 (-)
cnga4 cnga4,LOC103356095 other upstream 960907 24671222 ~ 24679011 (-)
G127032 neb other upstream 1988413 25698728 ~ 25701551 (-)
G127046 neb,LOC100194727 other upstream 2014759 25725074 ~ 25740126 (-)
arhgap20 LOC103357161,LOC102081671,LOC104942835 other upstream 2490847 26201162 ~ 26259576 (-)

Expression


Co-expression Network