G126581


Basic Information

Item Value
gene id G126581
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 24005073 ~ 24005642 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU170295
GCAATTCTTTCTTGGGTTTCATCTCAAATGACTGATTCCTCATCTAATCTCCTATTCAAAGACAAGAGACAAGATACTTGTATTCTGACTAATGGCTAAGCAATGAGCTCTAGATTTCGGTTGGGTCTGGGGAACATTAAATTATATCTTCTCTGCTCTTGCTGTTTGCAACCTTGGCAACCCAGATGTTCATCCATCACAGTCTTTGTAGCACTTGACCTTAGGTTTAAGAAATTGAAAATTAGGCCTAAAGAGAAACAAATCATTGATCAATAGGACTAAAATCTGTGGTCACAATTATAATCTGTAAGGGATCAATATTGTGAATTACAACCCCGACCGACTGATGCAGGAGCCCGGCTCAATGCAGAGGGGTCTTGAATCAGCCCGAAGGGGTTCAATTCGCAATAATGGCCGACTTGCTCTACGTTATCCTGCTTATTACACGGCTACTCATACAGAAGTTACACACTGCATCCCAGTCAGGACAGGTTAACTTTAATGTTGATTAGCACGGCTCTTAGGCGGAAGCCAGGTTGCCCTGGTGAGTGAGCTAACCCTGGAGCTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170295 True 570 lncRNA 0.43 1 24005073 24005642

Neighbor

gene id symbol gene type direction distance location
ppp2r3b ppp2r3b,LOC100705877,LOC102783484,LOC107099188,LOC102198241 coding upstream 75664 23905136 ~ 23929409 (+)
asmtl NA coding upstream 301146 23695387 ~ 23703927 (+)
p2ry8 p2ry8,gpr82,LOC103134757 coding upstream 309879 23690836 ~ 23695194 (+)
upf3a upf3a,LOC104960519 coding upstream 315196 23679658 ~ 23689877 (+)
cdc16 cdc16,LOC102786741 coding upstream 327798 23663340 ~ 23677275 (+)
itga4 itga4 coding downstream 61628 24067270 ~ 24089428 (+)
LOC120569576 NA coding downstream 132485 24138127 ~ 24152773 (+)
LOC120569575 ssfa2 coding downstream 147434 24153076 ~ 24179221 (+)
znf385b znf385b,LOC102780200 coding downstream 201017 24206659 ~ 24255994 (+)
LOC120569821 NA coding downstream 256545 24262187 ~ 24274142 (+)
G126563 NA non-coding upstream 57105 23946144 ~ 23947968 (+)
G126520 NA non-coding upstream 291096 23713488 ~ 23713977 (+)
G126519 NA non-coding upstream 293955 23710403 ~ 23711118 (+)
G126516 NA non-coding upstream 299371 23704943 ~ 23705702 (+)
G126515 NA non-coding upstream 300431 23704385 ~ 23704642 (+)
G126582 rpl8,LOC106586796,LOC107673716,LOC106581950 non-coding downstream 24403 24030045 ~ 24034174 (+)
LOC120570646 NA non-coding downstream 29234 24034876 ~ 24039495 (+)
G126628 NA non-coding downstream 86428 24092070 ~ 24098838 (+)
G126675 NA non-coding downstream 174808 24180450 ~ 24182202 (+)
G126712 NA non-coding downstream 374717 24380359 ~ 24383546 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other upstream 904990 22978602 ~ 23100083 (+)
G126363 lmo7 other upstream 1189971 22807193 ~ 22815102 (+)
fbxl3a fbxl3 other upstream 1266420 22730923 ~ 22738653 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other upstream 2313269 21655126 ~ 21691804 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other upstream 2370316 21619348 ~ 21634757 (+)
cwc22 cwc22 other downstream 178307 24183949 ~ 24199835 (+)
sestd1 sestd1 other downstream 271515 24277157 ~ 24298218 (+)
fzd5 LOC104950716,LOC108238837 other downstream 366829 24372471 ~ 24394985 (+)
cacnb4a cacnb4 other downstream 1624465 25630107 ~ 25664427 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other downstream 2111346 26116988 ~ 26129879 (+)

Expression


Co-expression Network