LOC120569246 (map4k4,LOC103370377,LOC103391611,LOC100703199)


Basic Information

Item Value
gene id LOC120569246
gene name map4k4,LOC103370377,LOC103391611,LOC100703199
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 25924907 ~ 25948407 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU171070
CTGTCATACACAGAGAGGACATAAGTTAGAGTAGCATGGCAGAAACAGCAGAGGAAAAAACACGTCGCCTCACGTCCAAGCCTGCAGGGAACGTTACTGTAATGTGTCCAGGTTGAAGCAGCGCTATGTGAATTCCTGAAATGAACAGCACGTGTGTTCTTTATCGTTTTGTAAGTAGGTTGTTTAGTGGGGTAGGGGGGGGATATGACAAAAGAATGAAAATATCCAAACAAAGAATTAAAGAACCAAGACGCAAATGCATTAAACATAAATATCATGATGCACATTAGTGTAACAAAACATTGCCTCTGTAAACATTTTCTCCACCTAAGGTGAGCGTAATAATATTAAACCACCGCAGCCGCATATTTACGTGTACATAGACTTACAGAAACTATTGTTAAGCTTTCCGACTAGCTCTAAAACTTAAGAATACACAATGCttcaaatgatttttttttttttttttaaggatttcCAAGTAGTGGTTTTCATAACAATGTTTACACGTTTTAAATGCTGCCCACTtggcactttttccaatgtGAGTCGGAAAGCGACCGTTTTTTCTCATCAGATATAGACTTAGCTCCCATCCTTTTTTAGCCCATTAAGAAGATCAATAATAACCACATTTTTTTCATGAAATCAATACAGCCACTCATCAAGGCCTTGATGCAATAAGAGACACACACTGGGTACTACTGCACACACAGACCTCAGACGACACAGCATTGGGGGTGTCCAAACGGCTTTTCTGTTAAGAGGGATAAAAGTTTGTGACAAACTGACATTTTCACATGTCAAAAACACTGCTCACGTGTGTAATTGTTATCGTCAGAGGAAAAATACACCCAAGGTAAACTTGTTTGTGATCTGTTTGGACATGAAGTGAGAGCACAAATTGAACTCTCCTTTGCCCCTTTTCTCAGTGAACAATGTGCAGTCTTTCAGAGTCGCTGTGGAAATGGAGGAAAATCCAGCTCAGCAGAAGGCCTGAAGGACATTGAAGCTGCAGTTTGCTGCCCAGTCTTTCACATATACAGACAACTTAAATAACAGCTGTAGCagaaagtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatctggggGGGGCAGAGTGAGGAAAGGTTTTGCTCCGTGTTGCTCGTTTTGTAACACTTTATCAGAGTAACACTGAAATCCAGAGTCTGAGTGTTGTACTGATAAGGTTTATGTCCGTGTTTCATAGGAAAGAGTGCCTGACGTACTCGCCAGAAAACCCCCCCTCAGTTCTCAAGCAGATTCTCACTGCTGTGGAAAGGTTGCAAATGGAGAATGCCCCATCCCCCCTCCCCCGGAAAATATCTACACCTGACGTAGAGTCTCCACTGCTGTAGCTTTCAATCGTCTATATCTCAAAATTGAACATCTAGGATTGATCACTTGTGACAAGATACAAAGCAAAAACATCATCTCATGCCTTGGACCACCACACAGTAATAAGTCTTTCTACATTCTTAACACTTAGTGCATTGCATTCATACAAATGatacaaatgaaaaatgttttgaaatggaAGATAGAAAACCGCCTTccagaaaaaaaatcctctgcTGAACCAAACCTGCTGACCATGCGTTTATCTCTGCCACGAAAATCCAATTTGTCGATGACACTTATCTCTCTGaccgcgcgcacacacacatactgaactTTCTTCTCTACCATATCGCTTCATTATcatcttttttcttattttatatcTGAGTATTCACAGCAGTTCAAGTTTCTCCAGTTGAGAGACACTGGCTGACCTCCCTACCCGAGATGAGTTTAGGTGGTCATGTTTGACTGGTGGGGGGAAAAACATGACCCCTGACACTATCTGGAAGATTCAGTGAACTTTTTTATTGTACATAgacaccttttcttttttggacCACACCCACATCACTTTTTTCTTAGACAAACACATCTTGCACTTCTGTGGGTTCAGAGTAAAAGCAAGCAAACTGTGGGTGGATGTGCgtaaatcttaaaaaacaagttaaaagacatgttttacTCCACATAGTTACATTTATCTTCAAggaataataatagtaataattcaAAAAATACTATTCTGAAATCCATCTGCTTCAGCGTCTTTCTAtaatcctctttttttctttttttttttaaagcacatgtCCAAACAACACAATACTTCAACGACATACACACCCACCTGTCGAGTCCCATCGATCAGACTTAAAGTAGAACCTCAAACTATTAGGCCCCTTTCCCCCGCTTGTCACCATGACAAGTCCAACTGGCTCcgagtgtttttttattttacaattgcCCCCTGGCTGACAGTCTCGACCTCTATCCAGCATGTCAGCAGTAATTGGACCAAACTGaagtacatttacacacactacTGTAGCATTAATACGACAGACTCCCACTCCACCGGCCCCATGAAGCGCTCATAAGAAAGGGCGGAGGGCAGGAACATGGGGCAGAGGGTGAACGCTCTTACAAGAGGCAGACCTGCAGAAGGTAGTAGCAGTTGTAATAATAGTGGTAGCAGTACTAGTAGTTAAAAGACCTTAAGCTTACTGACCTGCCCAGGAGCATGGAAATGCtgcagaggtaaaaaaaaaatatatatatcttatcaTAATCTGATAAGCACCAAGAAAACGGAGAGGGAAGCAAAATGTAATTTGCCCCCTTTACCTAAATtcacatttaatttatttttttactttctttcatATATTAATTCATCGTTGATGTCATCACTTCAGGCATTTCAGGGGGCGATGACTGTGTGACTTGACCGGTTGTCGCTGCGTCACAGGCGGCCCCGGAGCACTGATGCAGCAAGGCTGCAGCTCCAGAAGAAAGGTGAAGTCATTGCTGTTGACTGCTTCAGAGGGCTGGTTCGTTGTTGATTTTGTTCTCTTTTGGTTGTCCGAGGGCTGACAAGACATCGACGGTGGGTTCTGAGATCCAGTGTTAGCGAGGGTGGAGGACAATGAGGAGAAGGAAGAGGGCAGGGTGTGGACCTCTACCAGCTGAGCAGGTTGCTTCGGCCCAGAGTCATAAAGTAGACCTGGCTGGAGCCTCCAGACCGAACAGAGGCGAAGAACACCTGAAGAGgagggacagacagatggagatTTCACTACTAGAGGAACTTGAGTCTCTGGGCTCTCTTGTGCATGAAGACGCCATCCAGATGGCCGGTCTCCACCGAGCGGATCTCTATGGCCTTCTCTCCCCAACCCATGATCTGGTTGGAACGAATGTAGGCTAAAAAGAGGTATTTGAGTTAATCGATATACTGATTGCTCTaaaggtaggtaggtaggtgtgtgtgtgtgtgtgtgtgtggctacagGGCAAATTATTAATTAAGTGGCTTGTGTAGGCGAAACACATTAGCAGTGTGCATGTGTTAGCTATCAGGGATATATTAACCAATAAATAATGTACACAGTTAACATATTAGAGGAAGAAACAAACACATAGTAAAATTATTACATAATAGAAAATCAGCACTTTAATGTTTGCCATTGTTGCTTTGTTATTGTGTTGCTTTAAAACCCGAGGGTCTTGTCCTCTTTAAGAAGTCCCAAGATAACTCTGAGGGGGCCACGCAGgtcaggaaaaaagaaaaacacaggactAATTAGTATTCTCTTCCTTttctaatcattctttttgtttCCTGAAATGTTAAATGAGTTAGTAGTTTCAGGCCGGTAAATACTCAAATGTAACAACCTCAGGAAGGGAAAAATCCTCCTTTGGTGGAACTGATTGATATGTTGCATGCGAGATGTGAAGAGGGTTGGCAAGTAGACATTACTTTATTTTAGGGAGTTGTGATGCATAGACAAATGTATGAAGAAAAACTGTAAGCTGTGCGTTAGTGCAACTTTTGCCACTGACTCACCCACTGAGGTCGGCATCTCCCCCCACTGCAGCACTACATCCTTGGTGATGCGTCCATAGGTGTTCACGTAAACACCCTCGTCCTCGTAGCACACCAGCAGCTCGATGCCGTCAGTGTTGGGCAAGATGATGATGGCGTGAGACTGGATACTGGTCTGGATCTGCAGGGACACATAACACCAACATGGTGTCTGCTGAGGACTTTCTTTGAGaccattttataaaatgatttAACTGCACCATTGGCATCTATGATCAACTACAGCAGCAGAGCAATACACAAGACAACTGAAAATAAATCTTTTCAAAACGTtgaatttatattaattaatgCCTGGAAACTTAAAAAAGTTCATAATTCAGGGCTGCACGAAATGAGGAAATATGCTATATGCAATAAGGTTGTTGAATATCGCTCGTGATAAACGGATATTAAAGTATACTCAGTTCTggatttctgctgctttcagtattcttctaaaatacagcaaattgcttgttgaatttgaaaaaacgaaaaaaataaataaataaaaaatcctgaATTGAACATTGGATTGACATGAAAAGCACCATTAAAAAAGAATGAGAGTCGTAGATGATGCTCTCTTATCTCTAagtgtctttcgcgatgtgtttattgtgcaagttgatatcgcgataacgataaaAGCCCTACTGGAAACTCACAGTTCGTAATTCAGGCCATGAAAAATATAgcaacagtgaaaatgaaattgTCTGTCTGAGAAACTTGACAAAATCTTGCcattaaaaaactgaaatataatTTGAGGCACCAGCAAACATGCATGTGAGATATTATGCACGTGTGTTCTTACATGTGTAGGCAGGTAGATGTCATAGACAGCCCCAGAGTCGACATCCACAGCGTGGAAGCCTGAAGATGAGCCGTAGATAACCTTTAACCTctgaccctcctccacagtcaGGTCCACCAGCAGGGGCTTGTGCACCAGGTCACCGAAAGACTAAAGCACACAGTGACCAGGACGTTGAGTCCCTCCAGGACGTCCATCTGCTGGAAGCGCCGTCGGTTGATCAGAGGGTAGACTTTCCCCTGACCGCTGCGATCCAACAGCATCAGACCACTCTCTGTTCCCACCAACAGCTTTGGAGTCCTCCGGGCCAGAGGTTGACTCTTCGCCTGCCTCCTGGTCTACCTCTTCATCGTCATCTTCATCAGTGGTGTCTGAATCTTCACCACTGGAGGATGAATAATCTGTCACCTTATTTGGGGGGCGAACGTCATCCACTGCACGTAGCTCCTTGGCCAGAGCCGTCAGGTCCTAAAGGAGGTGAAAGAACTAAAGCCGGAAACAGAAAgctgcaggagaggaagagtggTTATTGAGGTACGCCAGCCAATGAGAAGCCAACGTGAGAGCAGCAAAGCCAAGAGATGAAGCGAGGAACGAAACATCGTACAGCTGATGCTCTTCAAGCTACTGTAGGTAAGGTTAGTGAATTAATTTGAATAATGAGACAattattagagctgcaaagatgaaaaaGTATAACAGTATACTTAGGTTAGAGGAGGCATGAGTTAAGATGGCCACCGCTTAGGCAGAAAGACCAGTGGAGAGAAAGCAAGCGATAAGTGCAGAAAACCCTTCAGCCAGGGAGCGCAATCCAAAGATGAAACAACCATTTCACAAAGTCTTATCACTTCACGCTATAGGATGATGTTCAGGTTACATGACACAGTCCAAATGAGCCAGTTTATTATCATTCACACAAGGAGAAAAATCTCCCATCAGGCCACGCTAAATCGTCACGCAAACTCCAGCTTTCAAACAAACCCAAAGCGTCATACCATCATGTAATCATGactatacacacaaacagagttCTAGATCTATCCCAGCTAGCGAGCTACAGTACTGGCTAGTCGGCTTGGAGTCAACTCTCACCGCTGGTCTGTTTGGCCTGACCAagtccttcctctcctctggttTTTTCACAGCATTCTCTGGCCGTTGGAGGGGCGAACCCTCTGATTTGGAGGAGGCTGAAGGAGGTGGAGGTGAAAAGTTCAGTTTATTctaaaaagtgatgaaaaaatccaaatgtgtatgcatgttttCACCCGAGTGTTTGTGTAGCCCCCTAACTAAAGTGGAATTTTTATGGTGCCATTTCAGTTATATTGTCCACCTCCTGTATGTTTCTTAGTGGAGATTTGAAGTGTGTGTGGACTCACAGCGGGCCCTGAATCTTTCTCCAGAGCCGCAGTGAGAACCGGGCTGAGAGCTTGAGTTACTGGAGCTGCTGGAGGAACTGGAGCCTCCGCTGCCACTGTTACTGGTTGGTCTGGGAACCAGTTTCTCCACTCGCTCCCACAGCAGCCGAGGCTCCGCCGCACTGTAAGGCCAACAAACACCGGAGTCAAGAAAGTCAGAGATGAAGCCATTGTAGAGATACCGACTTTTAACTCGGTAGAGTTGCAGAAGCGCTGTTGCACCACTGACTGTACTATGTAATCAGAGTTTTTAAAAGTGGATAGGTTCTTTATTCTGACAGAAACGGATATTTTCATGATGTTAATAGTGAATATTTTGGGCTGATATTCATTTCCCTGGCTCGTGGTTCAGAATGTCCCTAAATTATCTTTAAGTGACGCAAAAATTGGGAGCCAGTACAAAAGAGCTGTAAATcaggaaataaatgaataataacaTAGCAGAATAACCAAATTTtttgtttaacaaaaaaaaacgtaactTAAGCAATAGATTATATTTAAAGTCcatgatgaagaaaacaaaaatgctaAATAAGTAATGGTACAGTAAGAACAGAGTATATGTTCTTGAGATAAAATTACATACAGCACCACAGGGTGAGAGATGACATAGAGAATCTCATGAGATGTTTTGTGGTTTGCAAATCGAAAACTGTATCACAAGGTTAGCTAGCACTAGTACATAAACCCTCCCACACAACTCCATAAACAAGGACTATAGCAGCACAAACAGACAGTGAAGTCATTCCTGTGTGTGAGTTAAATCTATCTCCAAACAAGGCAAGCGTTTGTTTTGAAGAGTCGTTGAGAAAGTTAttctttttcatatatttttaaTGACAGTTGAAAAAAGCAGCCTGGTTTCATACTGCTTCACAGCACTCAGACCTTTCTCCTGAAGGCTGCCTGCAAATAACTTTCtttgacaaattaaaattttGCTGTAGTTCCTGAAGGTTTCATTGTGTCAGAGCCCTGGACTGATTCAGCGCCAATAAAACGTTCTCTGTAAACATATAGTAGCGGCACTTATTCTTGTCTAAAGATGCAACCAGCGGAGTCCCGTAAGGCAATATTCATGGCCCAGTTATACTCCAATAAACTTTCTTTTTTCGTATGTAAGTTTTATGTTACAGATTGTATTGTTTGAACAGTAGATGTAATAACTACCAATGAATGTAcatatttaataagatattGCAAATATACTGATTTGTTTTGTATCTCTTAACAACGCATATGCCAAACCATTTATATTTTCATCAAATAgttatttacacattttatatagtgttttttttttttttataattccaCTGATATCCTTTATAATCGTACATACATCAGGCATTTACACCATACAAACTCCATTCTAATTTCCAAAGAAACACAGAATCATACAAATCAGAGGGGTATGTCAGTTTACCTGGCAGAGGGGCGGTGCACAGCATGGCTGCCGTGTGAGGCGTTGCCATGGTGATGAGGCGAGTCTCGCCTTGACAACACTGGGGACCTTGATGTAGTCCTTACAGGAACCTTTTGTGATAAAGACAGTGACcagctcacacataaacactCTGTGTGCAGGAATGTGCTTGAAAGTGCAGCGAAtacataaaatacacaaaacatacTGCAACCTATCATAACTTCAGCCTATAAACTACGGCTTTGCTGTAGCATCACAACAACCCTAGTTGACACTATCCTGCTCAAGATCATTCAAGAAGTGGCTAACGCTTTTAACTTATTTAGCAAAGAATCCATATTAAAACAGAGAAACATTCATTTTCAAACTCAAAAGTCAGCGATGAAATTATCCCAATCAAAAACACAATTGAACTATGTAAATTAATTTAATCACTGCTTCTAGTGAGCTGTGGATGTCTAATTTGGCTGCGTTTTTAACTAAATGTAGAAGGACACTGTCTTATCAAAACCTGAACACTTGCTTGTAGAGTGAATCTACTTAATTCCACTCAAAACACATGTCCTCCACCAACTAAACCGCTTTCCACACCCCAGAGCACCATTGTAAAACAAAGCTATCACACCAGTAGTCACAGGTCACACCTATAGTCATACCTTTTCCCCTTTCAGAGTCACATGTAAATTCAGTAAAGCCAATGCAGAACATTTGGGAGCAtccaaacaacacaacacagcagaGCAGAACAGAACTTCCAGTCACAGCAGCCAACATTATTTTGCTTTGTGTagaagtttaaaggtcccacggcatgaaaatttcactttatgaggttttttaacattaatatgcgttcccctagcctgcctatggtcccccagtggctagaaaaggtgataggtgtaaactgagccctgggtatcctgctctgcctttgagaaaatgaaagctcagatgggccgatctggaatcttctccttatgaggtcataaggagcaaggttacctcccctttctctgctttaccgacccagagaatttggctcacccctgagagagagagagacatcatggctttcaaacgagcaaagtggcagttggtcaaggccacaccccctctctcctcctcaatagttacagacacagaaatggcacatactaaggaaagctcattgtgggactggctctagtggctgtaattctgcaccaaggctgaatttcgggaaggagacttcagattcagtattaggggaccactaaggtctatataaaagcatccaaagagcaccatgtcatgggacctttaagttaggGGCAAAATGGAAACCATATGGTCTGATGTTAATGAAATGTCAATCCTCCCTTGGTAACATGCTTCTCCTGTATTTTTTAGATTGAAATGACTCTTGTTGTGACCCTTGTTTACCTGATGCTTGTGGAGACGTTTATGTTGTATTAAAAACTATGTTCTACAGTTACAGAACGTCTTGATAGGGTTGTGGTTCAAGCTTGGCAGCAATTCTGTTTATAACTCAGGGTTTCTTTTTCTGGTGGGCAATTAACTTTGGCTCTGTGGACTGAATTTAGGTCCGTCTTAGTCTTTTGGATTCTGACTACCCACATTTGTGGGTTTTACCCCATAGCTTTCCTGTCTTCCCTATATTTAGCTATAGCGTCTAACACATTATACATTCAGGTGAGAAAAACTTATCTAAATGCAG
>XR_005640850.1
CTTCATCGTCATCTTCATCAGTGGTGTCTGAATCTTCACCACTGGAGGATGAATAATCTGTCACCTTATTTGGGGGGCGAACGTCATCCACTGCACGTAGCTCCTTGGCCAGAGCCGTCAGGTCCTAAAGGAGGTGAAAGAACTAAAGCCGGAAACAGAAAgctgcaggagaggaagagtggTTATTGAGGTACGCCAGCCAATGAGAAGCCAACGTGAGAGCAGCAAAGCCAAGAGATGAAGCGAGGAACGAAACATCGTACAGCTGATGCTCTTCAAGCTACTGTAGCATTCTCTGGCCGTTGGAGGGGCGAACCCTCTGATTTGGAGGAGGCTGAAGGAGGTGGAGAGCCGCAGTGAGAACCGGGCTGAGAGCTTGAGTTACTGGAGCTGCTGGAGGAACTGGAGCCTCCGCTGCCACTGTTACTGGTTGGTCTGGGAACCAGTTTCTCCACTCGCTCCCACAG

Function

symbol description
map4k4 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in several processes, including MAPK cascade; actin cytoskeleton reorganization; and activation of protein kinase activity. Predicted to be active in cytoplasm. Orthologous to human MAP4K4 (mitogen-activated protein kinase kinase kinase kinase 4).

NR:

description
PREDICTED: mitogen-activated protein kinase kinase kinase kinase 4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171070 True 9357 lncRNA 0.42 5 25924907 25948407
XR_005640850.1 False 467 lncRNA 0.54 4 25927956 25929284

Neighbor

gene id symbol gene type direction distance location
nms nms coding downstream 136352 25781815 ~ 25788555 (-)
LOC120570276 tbc1d8 coding downstream 151124 25744895 ~ 25773783 (-)
hacd2 hacd2 coding downstream 316442 25594973 ~ 25608465 (-)
adcy5 adcy5 coding downstream 339235 25504563 ~ 25585672 (-)
trnas-gcu_4 NA coding downstream 690896 25233930 ~ 25234011 (-)
LOC120569748 LOC102213137,LOC101469272,LOC104967153,LOC100691947,LOC102776592,LOC101156778,LOC103391967,LOC104928670 coding upstream 179243 26127650 ~ 26175193 (-)
cenpj cenpj,LOC104946111 coding upstream 426992 26375399 ~ 26395638 (-)
gja3 gja3,LOC101466613,LOC102798346,LOC102211816 coding upstream 547476 26495883 ~ 26502958 (-)
cryl1 cryl1 coding upstream 561839 26510246 ~ 26535632 (-)
eef1akmt1 eef1akmt1,LOC102796470 coding upstream 616855 26565262 ~ 26570134 (-)
G127109 NA non-coding downstream 101014 25820709 ~ 25823893 (-)
LOC120569833 NA non-coding downstream 119665 25799098 ~ 25805242 (-)
G127027 neb non-coding downstream 230360 25690538 ~ 25694547 (-)
LOC120569982 NA non-coding downstream 464910 25453624 ~ 25459997 (-)
G126926 NA non-coding downstream 659382 25194734 ~ 25265525 (-)
G127180 NA non-coding upstream 158958 26107365 ~ 26107568 (-)
G127205 NA non-coding upstream 344015 26292422 ~ 26292746 (-)
G127299 NA non-coding upstream 493381 26441788 ~ 26442436 (-)
G127313 NA non-coding upstream 531914 26480321 ~ 26484045 (-)
LOC120570220 NA non-coding upstream 1194218 27142625 ~ 27146072 (-)
G127046 neb,LOC100194727 other downstream 184781 25725074 ~ 25740126 (-)
G127032 neb other downstream 223356 25698728 ~ 25701551 (-)
cnga4 cnga4,LOC103356095 other downstream 1245896 24671222 ~ 24679011 (-)
si:ch211-218d20.15 LOC104960513,LOC101470276,LOC102197480,LOC102292608,LOC107099189,LOC100692635 other downstream 1967701 23954846 ~ 23957206 (-)
gpr18 gpr18 other downstream 2800999 23110033 ~ 23123908 (-)
arhgap20 LOC103357161,LOC102081671,LOC104942835 other upstream 252755 26201162 ~ 26259576 (-)
gjb8 LOC103391957,LOC104941692,LOC103357168 other upstream 555152 26503559 ~ 26508638 (-)
lats2 lats2 other upstream 690343 26638750 ~ 26668281 (-)
tent5c fam46c,LOC102790440,LOC104944279,LOC103372770 other upstream 1202424 27150831 ~ 27157516 (-)
LOC120570374 NA other upstream 1565913 27514320 ~ 27521960 (-)

Expression


Co-expression Network