G127270


Basic Information

Item Value
gene id G127270
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 26510175 ~ 26518288 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU171257
TGAattcatggttttatttttccttaGGAATAGGATAAAACATGttattataaaaaagaaatacatacatgtttgatttcattgtttttattaatccTATTTTTCACATAATTTATTCACCTGGGAGAACATTATGTGGTGTGTAGCATTGCTTTTAATTCAGTTCCTTTATTATCACAGTGTTAGTCTTGAGATCAAGTTGTAGACAAACagattttatactgtaaagtttgaaaaaacatgtttgaaatTGAATCCCTGCGTCCTTATGGGTAGCAAGCTACTGTTCTTTTATAATGTCCAAAAACTCCATAAAAGGCACTTTGAGAGCACAAATGTTCAGTGTCACTGAACGTCACTCCCAAGATATTCTTATCATTTAAATTGTTATATTGTTATCTTTTTGCATAATTCATATTGGTCTACCAAATttcacagattttctttttagtCATAATTAAAAGGGTTCTTGGCTTTGGGCCCTGCATGCTGATTTTAGTGCTCCTTCTTCAGCTTGGCCAGACCCATGAGGAGCTGGTCCCGCCTCTCAATCCGGGCCGACAGATGCTGCAGGTCGCTGGGGATCAGCTCACACATCTCCTGTGGACAGAAGGATTATTTAGGAAGTACCGGGAGAAGAGGGCCtgaggatggagggatggatggaaggaGTGACAGAGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171257 True 684 lncRNA 0.38 2 26510175 26518288

Neighbor

gene id symbol gene type direction distance location
ttf2 ttf2,LOC105900813,LOC105419959 coding upstream 99414 26396070 ~ 26410761 (+)
rnf17 NA coding upstream 136271 26314786 ~ 26373904 (+)
LOC120569747 NA coding upstream 383064 26099440 ~ 26127111 (+)
LOC120570670 NA coding upstream 414178 26086729 ~ 26095997 (+)
il1rl1 NA coding upstream 435836 26027828 ~ 26074339 (+)
ift88 ift88 coding downstream 17665 26535953 ~ 26560881 (+)
il17d il17d coding downstream 42734 26561022 ~ 26565252 (+)
popdc2 popdc2 coding downstream 200217 26718505 ~ 26731164 (+)
wars2 wars2,LOC102792775 coding downstream 313705 26831993 ~ 26860003 (+)
tbx15 tbx15 coding downstream 348907 26867195 ~ 26907517 (+)
G127273 NA non-coding upstream 4632 26503559 ~ 26505543 (+)
G127264 NA non-coding upstream 67877 26441396 ~ 26442298 (+)
G127209 NA non-coding upstream 153266 26352887 ~ 26356909 (+)
G127204 NA non-coding upstream 217386 26292443 ~ 26292789 (+)
G127203 NA non-coding upstream 242074 26267885 ~ 26268101 (+)
G127332 lats2 non-coding downstream 117943 26636231 ~ 26640460 (+)
G127333 LOC107712271,LOC107597418,LOC107724484,LOC107569193,LOC107658249 non-coding downstream 124027 26642315 ~ 26642650 (+)
G127336 lats2 non-coding downstream 141250 26659538 ~ 26660321 (+)
G127361 NA non-coding downstream 218278 26736566 ~ 26743198 (+)
G127366 NA non-coding downstream 239019 26757307 ~ 26761690 (+)
zmym2 zmym2 other upstream 26087 26449443 ~ 26484088 (+)
mphosph8 mphosph8 other upstream 70890 26411477 ~ 26439285 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other upstream 380296 26116988 ~ 26129879 (+)
cacnb4a cacnb4 other upstream 845748 25630107 ~ 25664427 (+)
fzd5 LOC104950716,LOC108238837 other upstream 2115190 24372471 ~ 24394985 (+)
LOC120569906 NA other downstream 195062 26713350 ~ 26717397 (+)
prkag3b prkag3,LOC103374929,LOC105937223,LOC107101406 other downstream 1870355 28388643 ~ 28409839 (+)
G127814 itgb5 other downstream 2510614 29028902 ~ 29041224 (+)
LOC120569952 LOC103367759,LOC104957842,LOC103482036,LOC106947595,LOC102235455,LOC102799479,LOC101465930,LOC102199775 other downstream 2778196 29296484 ~ 29299361 (+)
G127932 LOC103367765,LOC102202048,LOC100700231 other downstream 2940856 29459144 ~ 29459978 (+)

Expression


Co-expression Network