G127361


Basic Information

Item Value
gene id G127361
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 26736566 ~ 26743198 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU171368
CTCGTCCTCACCTGTAACCGTGGATGATGACCTTTGTCGGGTGGGAGATGTTGAAGTAGGACGGCTGCTTCTGTGTTTCAGTGAGAGACTCCTGGTTGAACATTTGGGCACAGTCCATGTTCCTCCTCGTGAGCAGCATGTACTGCACCTGCAGCTTGACTCTCTGCTGCCGGTACTCCAGCCAGGTGGTGTTGTTGAGGTCAGCGCACTCTTCATCGCTCTGAATTTCCTCCACACCCACCACCAGGGCTGTAATGCAGACTGTCAAGACACAGAGGAGGATCGGTTTGAGTTTACGAGGCATTTCTGTTGAACGACAGAGGTGAATGGGGAGAGTAGCTGCCTGGGAGCTTTAGGTAGTGCTTAACGGTGATCAGCTGCTCTGTTTAGCTCCCAGATTGCTGAATGGAGATCAGCTTTCGGCTTGAGAAAATCCTGGCTCTGTGCAGTTTTGTAACTCTGGAACGACTACTCATAAGCAGTCTTGTAAAGCTTCCCCTTTTAACAGGAATGTCCTTTTTACTCAGTCATCACAGTCGTCAgtgggttttttattttttattgttattttccCAGAATGGGTTTGTACTGGGCCGACAAGTGGTTGCAGCTCTTTGCCAGGCGGTGAAGCCATGACCTCATTGGTGTTC
>TU171370
agtgcagtaaaaagtgcaatatttgcctctgaggTATAGCAGAGcagaaaaatagaaatactcaagtaaagaacAAGGATctcaaaattgtgcttaagtACTCAGGTACTAAAGTACTAAATTACTCTACACCACAGGTTGTAGAGGGTGCTGAACTTACTTGAAGCGAACCTAGAGCGAGCACATCCAGTCTGGTCTTTTCCTCCATTCAGAAAGAAGTCCACATGACCGACAGGGATGGAAATCCCAAAATAGTCAGCGTCCGTGTGGATGGCGTCAACAAACTGAGCGTCAGATGGGTCCAGCCGGTCAAAGGTGTCGGCTCCTTTAAACATGGGTCCAGCAGGGTCAAGAGCTGTGATTCGTCCTATCTTCCCCTCGAAAAGAGTCCCCACGAAACCAGCGACGTGCGCCCCAAGACTGACCCCGATGAAGTGGAAGGACTCTAGCTCGCATCCGTGTTTCTGCAGCTGGTTGATGAGGACAGAGATCTGCAACGCCACCTCCTTGTAATTCTCCACTGCCAGGTTGTAGGCGAAGGAGGCGCCGTAGACCCAGTCCACCACCAGCACGTTGACATTCTGCGCCCTGAGCACAGCCTGGGCCAGCTGCTTCACCCACGACGGCTTACTGCCCAGGATCCTGTAACCGTGGATGATGACCTTTGTCGGGTGGGAGATGTTGAAGTAGGACGGCTGCTTCTGTGTTTCAGTGAGAGACTCCTGGTTGAACATTTGGGCACAGTCCATGTTCCTCCTCGTGAGCAGCATGTACTGCACCTGCAGCTTGACTCTCTGCTGCCGGTACTCCAGCCAGGTGGTGTTGTTGAGGTCAGCGCACTCTTCATCGCTCTGAATTTCCTCCACACCCACCACCAGGGCTGTAATGCAGACTGTCAAGACACAGAGGAGGATCGGTTTGAGTTTACGAGGCATTTCTGTTGAACGACAGAGGTGAATGGGGAGAGTAGCTGCCTGGGAGCTTTAGGTAGTGCTTAACGGTGATCAGCTGCTCTGTTTAGCTCCCAGATTGCTGAATGGAGATCAGCTTTCGGCTTGAGAAAATCCTGGCTCTGTGCAGTTTTGTAACTCTGGAACGACTACTCATAAGCAGTCTTGTAAAGCTTCCCCTTTTAACAGGAATGTCCTTTTTACTCAGTCATCACAGTCGTCAgtgggttttttattttttattgttattttccCAGAATGGGTTTGTACTGGGCCGACAAGTGGTTGCAGCTCTTTGCCAGGCGGTGAAGCCATGACCTCATTGGTGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171368 False 650 lncRNA 0.50 2 26740190 26743198
TU171370 True 1281 lncRNA 0.50 6 26736566 26743198

Neighbor

gene id symbol gene type direction distance location
popdc2 popdc2 coding upstream 5402 26718505 ~ 26731164 (+)
il17d il17d coding upstream 171314 26561022 ~ 26565252 (+)
ift88 ift88 coding upstream 175685 26535953 ~ 26560881 (+)
ttf2 ttf2,LOC105900813,LOC105419959 coding upstream 325805 26396070 ~ 26410761 (+)
rnf17 NA coding upstream 362662 26314786 ~ 26373904 (+)
wars2 wars2,LOC102792775 coding downstream 88795 26831993 ~ 26860003 (+)
tbx15 tbx15 coding downstream 123997 26867195 ~ 26907517 (+)
gdap2 gdap2 coding downstream 345797 27088995 ~ 27119350 (+)
LOC120569540 LOC100689803 coding downstream 837880 27581078 ~ 27587589 (+)
LOC120570327 cntnap5 coding downstream 1061727 27804925 ~ 27910727 (+)
G127336 lats2 non-coding upstream 76245 26659538 ~ 26660321 (+)
G127333 LOC107712271,LOC107597418,LOC107724484,LOC107569193,LOC107658249 non-coding upstream 93916 26642315 ~ 26642650 (+)
G127332 lats2 non-coding upstream 96106 26636231 ~ 26640460 (+)
G127270 NA non-coding upstream 218278 26510175 ~ 26518288 (+)
G127273 NA non-coding upstream 231023 26503559 ~ 26505543 (+)
G127366 NA non-coding downstream 14109 26757307 ~ 26761690 (+)
G127376 NA non-coding downstream 35096 26778294 ~ 26779081 (+)
G127414 NA non-coding downstream 381838 27125036 ~ 27126371 (+)
G127415 NA non-coding downstream 383280 27126478 ~ 27127406 (+)
G127430 NA non-coding downstream 389117 27132315 ~ 27132531 (+)
LOC120569906 NA other upstream 19169 26713350 ~ 26717397 (+)
zmym2 zmym2 other upstream 252478 26449443 ~ 26484088 (+)
mphosph8 mphosph8 other upstream 297281 26411477 ~ 26439285 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other upstream 606687 26116988 ~ 26129879 (+)
cacnb4a cacnb4 other upstream 1072139 25630107 ~ 25664427 (+)
prkag3b prkag3,LOC103374929,LOC105937223,LOC107101406 other downstream 1645445 28388643 ~ 28409839 (+)
G127814 itgb5 other downstream 2285704 29028902 ~ 29041224 (+)
LOC120569952 LOC103367759,LOC104957842,LOC103482036,LOC106947595,LOC102235455,LOC102799479,LOC101465930,LOC102199775 other downstream 2553286 29296484 ~ 29299361 (+)
G127932 LOC103367765,LOC102202048,LOC100700231 other downstream 2715946 29459144 ~ 29459978 (+)
G127935 LOC103149918,LOC106933234,LOC104960782,LOC104932527,LOC108238793,LOC103482149,LOC105920790 other downstream 2723946 29467144 ~ 29474550 (+)

Expression


Co-expression Network