LOC120570374


Basic Information

Item Value
gene id LOC120570374
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 27514320 ~ 27521960 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU171576
AAAAGATACTTGGTATTGGATTGGTTTGACTGACAGAGATGAGGAGGGGACCTGGAAATGGGTAGATGGAACTCCACTGACTCTGAAgaACTGGAGGACAGGGCAGCCTGATAATGGCGGTGGAGATCCACAGTCGGGCGAAGAGGACTGTGCACATATTGGACCTACCACCACTGAGTGGAATGACATGTCATGTAAATCTGTTATGTAC
>XM_039818685.1
CTGCAACTCATTTTGAATCAAAATTGAGAATAACTTCAGTACTCACAGTATGTACGGAGTTTCATAGTTTACATGTAGTGCAGTCCGTCCTGCAGCAATGAACCTTCAGGAAATAGTCTGACACCTCATAAGCGATGGATGACATCTATGCCAATGTTGAAAATGACAAGTCTGTTAACCCAAGACCTTCAACAAATCAGACAGGTCCCAGGAGCTCAGAGAGGAGATTTCATGGAGCTGTTGTTCTCTGTCTGGGGCTGCTGAGTGTTTTCCTGCTGGCTGGGATCATCGGCCTCGGTGTCCACTACCATGTGTCATTACGTGGATCAGCTGCAGAGCTCTCCTTTATCAAAGCCAACCTGACTGAGCGTCTCCAGGCCAGTGATAACAAGTCTTCTTCcctgactgaagagagagaccGGCTGAACTCCAGCCTCACTGAAATGGCTAAAGAGTTGGACCGGCTTAAACAGAAGAAAACGTGTCCAGCAGGATGGAGGATGTTCAGTTCTTCCTGTTTTCTCCTCTCTGCTGAGTCTGGTTCCTGGGAGAAAGGCAGACAagactgcagagagagaggagcagatcTGGTGATTATAGAAAGCTCTCAAGAGCAGACGTTTCTCTCTGAATTCGTCAAAAAAGATACTTGGTATTGGATTGGTTTGACTGACAGAGATGAGGAGGGGACCTGGAAATGGGTAGATGGAACTCCACTGACTCTGAAgaACTGGAGGACAGGGCAGCCTGATAATGGCGGTGGAGATCCACAGTCGGGCGAAGAGGACTGTGCACATATTGGACCTACCACCACTGAGTGGAATGACATGTCATGTAAATCTGTTATGTACTGGAtctgtggaaaaaaagtttaacataggtgtatgtttatgttttgagaTCATACATGTGATAAAGCTTTTACAGtgtaagctgtgtgtg

Function

GO: NA

KEGG:

id description
K17513 CLEC17A; C-type lectin superfamily 17 member A

RNA

RNA id representative length rna type GC content exon number start site end site
TU171576 False 211 lncRNA 0.48 2 27514411 27517622
XM_039818685.1 True 942 mRNA 0.46 7 27514320 27521960

Neighbor

gene id symbol gene type direction distance location
LOC120570376 NA coding downstream 8223 27502088 ~ 27506097 (-)
LOC120570375 NA coding downstream 14273 27498045 ~ 27500047 (-)
LOC120570377 NA coding downstream 16778 27467504 ~ 27497542 (-)
LOC120570371 NA coding downstream 50927 27458479 ~ 27463393 (-)
LOC120570373 NA coding downstream 78580 27417008 ~ 27435740 (-)
parp4 NA coding upstream 4968 27526928 ~ 27557211 (-)
ndufa10 ndufa10 coding upstream 415222 27937182 ~ 27947972 (-)
si:ch211-67e16.11 LOC104924859,LOC104960577,LOC103373874,LOC105417635 coding upstream 825083 28347043 ~ 28359894 (-)
si:ch211-67e16.4 NA coding upstream 927984 28449944 ~ 28462012 (-)
LOC120570452 LOC104951952 coding upstream 944328 28466288 ~ 28479685 (-)
G127523 NA non-coding downstream 109941 27404164 ~ 27404379 (-)
G127489 NA non-coding downstream 170277 27343786 ~ 27344043 (-)
LOC120570220 NA non-coding downstream 368248 27142625 ~ 27146072 (-)
G127313 NA non-coding downstream 1030275 26480321 ~ 26484045 (-)
G127299 NA non-coding downstream 1071884 26441788 ~ 26442436 (-)
G127539 NA non-coding upstream 91934 27613894 ~ 27614249 (-)
G127590 NA non-coding upstream 419217 27941177 ~ 28081746 (-)
LOC120569524 NA non-coding upstream 432738 27954698 ~ 27965059 (-)
G127636 NA non-coding upstream 715765 28237725 ~ 28287982 (-)
G127693 fer1l6 non-coding upstream 911482 28433442 ~ 28433667 (-)
tent5c fam46c,LOC102790440,LOC104944279,LOC103372770 other downstream 356804 27150831 ~ 27157516 (-)
lats2 lats2 other downstream 846039 26638750 ~ 26668281 (-)
gjb8 LOC103391957,LOC104941692,LOC103357168 other downstream 1005682 26503559 ~ 26508638 (-)
arhgap20 LOC103357161,LOC102081671,LOC104942835 other downstream 1254744 26201162 ~ 26259576 (-)
G127046 neb,LOC100194727 other downstream 1774194 25725074 ~ 25740126 (-)
G127800 NA other upstream 1452156 28974116 ~ 28974542 (-)
etv5a etv5 other upstream 1556237 29078197 ~ 29092928 (-)
LOC120569310 NA other upstream 1765755 29287715 ~ 29294679 (-)
G127903 LOC101464856 other upstream 1824119 29346079 ~ 29346889 (-)
G127923 LOC103391627,LOC101464856 other upstream 1866016 29387976 ~ 29393143 (-)

Expression


Co-expression Network