G127570


Basic Information

Item Value
gene id G127570
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 27938694 ~ 27943622 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU171621
ATCGACAccaatgtatttggtcaaaaatattgtgatattagatttcctccatattgcccagctctagctgAAATGCCAAAAATGTGTTTGGGTTGTGACGTAATCACATTATCAATACATTTCCAGAACAGAACAATAAATTGCCCTGACCAGAcgacgtttaaaaaaaatagaataactaaaaaaaataaataaataaataaaccctCGCTTGGCGAAATATCAGCATGCAACACTAAGGCTGTCTCATTCGGCATACTTCCGGCAGTACCCTGCTAATGTGGATTGACCACTTACTGCTGTAGCGCCCACTTTCGATGGTTAGTATTGTCCCAAAAGGACCACTTATGTTAAAACGCTcaccggaaatgacgagtggGATGAGCGGGACGAACGCaacacatggcagctgattggacgaacgcgtcacgtgggtctggctgcttcCAAATTAAAAACCGACCATAATGgtggctcgttcggaatacaatctcatattttacgaaaatagttcaccgaaagtgtttctgaaaacattttaagcgagaaatgggCCATACAGCTGCtgaattatctttttttttttttttataggtttacaaagtgaaaaagcccaaagtccccccccaaagggacttaccatctccaacagaaaacactgttcaccaactgctccaaacagctctattgtagtccagcctttacttcagagacaaacgtgcgtcactttgtaacacatgttataatgctcgcctagctgctagcgtggcacgccctcatactctgcttctgactggctagtagtccttacctagctactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171621 True 821 lncRNA 0.42 2 27938694 27943622

Neighbor

gene id symbol gene type direction distance location
LOC120570327 cntnap5 coding upstream 27967 27804925 ~ 27910727 (+)
LOC120569540 LOC100689803 coding upstream 351105 27581078 ~ 27587589 (+)
gdap2 gdap2 coding upstream 819344 27088995 ~ 27119350 (+)
tbx15 tbx15 coding upstream 1031177 26867195 ~ 26907517 (+)
wars2 wars2,LOC102792775 coding upstream 1078691 26831993 ~ 26860003 (+)
LOC120569522 LOC104941720 coding downstream 20799 27964421 ~ 28011644 (+)
LOC120569523 LOC104941714,LOC104924856,LOC103373286 coding downstream 82913 28026535 ~ 28078578 (+)
kalrna kalrn coding downstream 148816 28092438 ~ 28282323 (+)
abcb6b LOC101063776,LOC107092899 coding downstream 346365 28289987 ~ 28339721 (+)
ttll4 ttll4 coding downstream 418510 28362132 ~ 28382307 (+)
G127542 NA non-coding upstream 287911 27650396 ~ 27650783 (+)
G127541 NA non-coding upstream 312074 27626408 ~ 27626620 (+)
G127538 NA non-coding upstream 347476 27590977 ~ 27591218 (+)
G127498 NA non-coding upstream 410206 27431551 ~ 27528488 (+)
G127484 NA non-coding upstream 574955 27363533 ~ 27363739 (+)
G127613 NA non-coding downstream 284474 28228096 ~ 28228450 (+)
G127623 NA non-coding downstream 399870 28343492 ~ 28343798 (+)
G127665 NA non-coding downstream 441795 28385417 ~ 28385642 (+)
G127701 NA non-coding downstream 590321 28533943 ~ 28534172 (+)
LOC120570261 NA non-coding downstream 768809 28712431 ~ 28713525 (+)
LOC120569906 NA other upstream 1221297 26713350 ~ 26717397 (+)
zmym2 zmym2 other upstream 1454606 26449443 ~ 26484088 (+)
mphosph8 mphosph8 other upstream 1499409 26411477 ~ 26439285 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other upstream 1808815 26116988 ~ 26129879 (+)
cacnb4a cacnb4 other upstream 2274267 25630107 ~ 25664427 (+)
prkag3b prkag3,LOC103374929,LOC105937223,LOC107101406 other downstream 445021 28388643 ~ 28409839 (+)
G127814 itgb5 other downstream 1085280 29028902 ~ 29041224 (+)
LOC120569952 LOC103367759,LOC104957842,LOC103482036,LOC106947595,LOC102235455,LOC102799479,LOC101465930,LOC102199775 other downstream 1352862 29296484 ~ 29299361 (+)
G127932 LOC103367765,LOC102202048,LOC100700231 other downstream 1515522 29459144 ~ 29459978 (+)
G127935 LOC103149918,LOC106933234,LOC104960782,LOC104932527,LOC108238793,LOC103482149,LOC105920790 other downstream 1523522 29467144 ~ 29474550 (+)

Expression


Co-expression Network