G127932 (LOC103367765,LOC102202048,LOC100700231)


Basic Information

Item Value
gene id G127932
gene name LOC103367765,LOC102202048,LOC100700231
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 29459144 ~ 29459978 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU172063
GCAAGGTTTCGCTCAATGGCTAAAATTCGGTGACCCTCCTGAAGGAGCCGACAATGGCGCAGGTGGCGCACCAGTCGCGGTACCTCCTGTACTCCCCAGGTCTCAGGAAGTACTGTCTGCCTCGGTAGTTGGGGTACTCATAGAAGATCCAGAAGCCATTCATAACATTACTGGAGTAGACATGGCGGTGATGGAAACGGtcagacacacagggacagtCATCCATGAACTCCATCATGTGGCCGCTGAAGTCGGGCTTCTCATAGATACGCAATCTGTAGGAGCCTCGATACAGTGGAATCATCCTGCACGAGCGGATACAGCTGCTGAAGCCCATCCACCTCTGGTAGTCGGGGTACTCTCCCCTCCTCATGAAGTACTGGTGGCCCATGAAGTTGGGACGCTCATAGATCATGAAGCAGCCGCTCTCCACCCTGATGGAGTTGCAGCGGCTGAAGTACGAGTGAAGGTCCGTGCAGTCGTTGCCGCACTCATAGCTCCGACCCTGGAAGTTCTTGTCCTCGTAAAAGATAATCTTGCCCATG

Function

NR:

description
PREDICTED: gamma-crystallin M2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172063 True 545 TUCP 0.54 3 29459144 29459978

Neighbor

gene id symbol gene type direction distance location
LOC120569977 LOC103367763,LOC102293787 coding upstream 7539 29450724 ~ 29451605 (+)
LOC120569975 LOC101466214,LOC102201177,LOC104960775,LOC102293501 coding upstream 13485 29444640 ~ 29445659 (+)
LOC120569973 NA coding upstream 25470 29432809 ~ 29433674 (+)
LOC120569966 LOC101169261,LOC105909533,LOC105899371,LOC101061248,LOC105899370 coding upstream 34706 29423530 ~ 29424438 (+)
LOC120569968 LOC103391627,LOC105922254,LOC107102032,LOC105922255,LOC104958343,LOC104945912,LOC103367775 coding upstream 37625 29401106 ~ 29421519 (+)
pikfyve NA coding downstream 33262 29493240 ~ 29534665 (+)
coq10b coq10b coding downstream 144996 29604974 ~ 29612696 (+)
LOC120569381 LOC106676183,LOC106674878 coding downstream 226924 29686902 ~ 29688335 (+)
tbccd1 tbccd1 coding downstream 546234 30006212 ~ 30017272 (+)
crygs2 crygs,LOC100697552,LOC102785552,LOC102308001 coding downstream 561550 30021528 ~ 30028748 (+)
G127896 LOC101169261,LOC102201764,LOC101061248,LOC102292499 non-coding upstream 2259 29456003 ~ 29456885 (+)
G127893 NA non-coding upstream 60515 29394183 ~ 29398629 (+)
G127872 NA non-coding upstream 165586 29292980 ~ 29293558 (+)
G127805 NA non-coding upstream 374484 29078731 ~ 29084660 (+)
G127806 NA non-coding upstream 414923 28984700 ~ 29044221 (+)
G127934 LOC102777138,LOC101467669,LOC104960780,LOC108238795 non-coding downstream 1934 29461912 ~ 29462923 (+)
G127942 NA non-coding downstream 26253 29486231 ~ 29489650 (+)
G127949 NA non-coding downstream 63373 29523351 ~ 29615024 (+)
G127964 sf3b1 non-coding downstream 124958 29584936 ~ 29586979 (+)
G128052 NA non-coding downstream 535046 29995024 ~ 29996113 (+)
LOC120569952 LOC103367759,LOC104957842,LOC103482036,LOC106947595,LOC102235455,LOC102799479,LOC101465930,LOC102199775 other upstream 159783 29296484 ~ 29299361 (+)
G127814 itgb5 other upstream 417920 29028902 ~ 29041224 (+)
prkag3b prkag3,LOC103374929,LOC105937223,LOC107101406 other upstream 1049305 28388643 ~ 28409839 (+)
LOC120569906 NA other upstream 2741747 26713350 ~ 26717397 (+)
zmym2 zmym2 other upstream 2975056 26449443 ~ 26484088 (+)
G127935 LOC103149918,LOC106933234,LOC104960782,LOC104932527,LOC108238793,LOC103482149,LOC105920790 other downstream 7166 29467144 ~ 29474550 (+)
G127938 LOC100695514,LOC102778272,LOC103367768,LOC104960783 other downstream 16134 29476112 ~ 29478950 (+)
G127971 hspd1 other downstream 161714 29621692 ~ 29622929 (+)
LOC120569632 hspe1,mob4,LOC101472107,LOC102310674,LOC100701317,LOC106530744,LOC102783361,LOC103156730,LOC108238849,LOC107095707,LOC106582314,LOC101078365,LOC107389570,LOC104932517,LOC105923971 other downstream 166479 29626457 ~ 29640925 (+)
plcl1 plcl1,LOC102784025 other downstream 241881 29701859 ~ 29809049 (+)

Expression


Co-expression Network