Fish Transcriptome and Expression Database

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model fish

XLOC_004751

Basic Information

Item	Value
gene id	XLOC_004751
gene name	NA
gene type	non-coding
species	zebrafish (Danio rerio)
category of species	model fish

Chromosome Information

Item	Value
chromosome id	NC_007123.7
NCBI id	CM002896.2
chromosome length	49182954
location	26691819 ~ 26692051 (+)
genome version	GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010743
cttttgttttgttttacacttTAAAATTACTATAATTAAGTGCTCAATGTACcattggaaagaaaaaaaaatatatatatatactcattattttagtataaaaatgataataatatacagttgaagtcagaattattagccccctttaaattttatttaattaaaaaaatatatatatttcccaaattatgtttatcagagcaagaacattttcacagtatgtctgataatat

Function

GO: NA

KEGG:

id	description
ko03230	Viral genome structure
ko05164	Influenza A
ko03200	Viral proteins

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TCONS_00010743	True	233	lncRNA	0.21	1	26691819	26692051

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
XLOC_004749	si:dkey-148d16.5	coding	upstream	79848	26608883 ~ 26611971 (+)
XLOC_004748	NA	coding	upstream	98521	26589644 ~ 26593298 (+)
XLOC_004747	faap100	coding	upstream	144571	26538861 ~ 26547248 (+)
XLOC_004746	chad	coding	upstream	166120	26512569 ~ 26525699 (+)
XLOC_004745	armc7	coding	upstream	196968	26491637 ~ 26494851 (+)
XLOC_004752	NA	coding	downstream	45380	26737431 ~ 26834192 (+)
XLOC_004753	znf438	coding	downstream	185330	26877381 ~ 26964998 (+)
XLOC_004754	BX469896.1	coding	downstream	202270	26894321 ~ 26896616 (+)
XLOC_004755	msl1b	coding	downstream	329928	27021979 ~ 27028808 (+)
XLOC_004756	fbrs	coding	downstream	342543	27034594 ~ 27061336 (+)
XLOC_004744	NA	non-coding	upstream	199846	26489353 ~ 26491973 (+)
XLOC_004738	CR932018.1	non-coding	upstream	1043576	25648127 ~ 25648243 (+)
XLOC_004735	NA	non-coding	upstream	1187439	25502406 ~ 25504380 (+)
XLOC_004733	CR932077.1	non-coding	upstream	1261448	25312018 ~ 25430371 (+)
XLOC_004762	dre-mir-10a	non-coding	downstream	442818	27134869 ~ 27134967 (+)
XLOC_004777	NA	non-coding	downstream	1684979	28377030 ~ 28381255 (+)
XLOC_004779	NA	non-coding	downstream	1925650	28617701 ~ 28617965 (+)

Expression

Co-expression Network