pttg1ipb (LOC104944099,LOC103370189)


Basic Information

Item Value
gene id pttg1ipb
gene name LOC104944099,LOC103370189
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 15502117 ~ 15505588 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817087.1
ACCCTCCAGTTTGACTCCTCAGAAACGGTAGTTTTGGTCGTTACTTCTGTTTCCATGCAGTCGATGGCTTTCACTCGTCTCACAATGTCCGGACAGTTCAGATCTTCAGCCTTTGTTTTTGCCTTGATTTTCTACGGTGTTATTATATCCGCAGGGGCGCAGACACCGACTACTTCTCCGGCTacgaCTCCTTGTGCCTTGAGATCCAACACCAGTTGTGCTGAATGCCTGCAgaatgtgacaTGTTTGTGGTGCATGCCAACCAAACAATGCGTGGACTACCCAGTGAGGAACATCTTGCCCCCCAGCAGCATCTGTCCATTGAATGACGCACGATGGGGGTTGTGTTGGGTAAACTTCCAGATTTTGATCATCACTATGTCAGTGCTGGgtggcatcatcatcatcaccattcTTGTTTGCTGCTTTTGCTGCTGCAAGTGTGAAAGAATTGGGAACAAGAAAGAAGATGCAAAGGTGGAGCGACAAACCCGGGCCAGAAAGAGCCGTCAGAAAGCAAAGAGAACAGAAATGCAGCTGAGACATGATGAAATCAGGCAGAAATATGGTATGGCAAAGGATAATCCATACGCCCGTATGGATGATCACTGAGAAGAATCTCAGCGATgattcctttaaaaaaatcccTTTAAAGGATTATATTGATGCCAGTAACATAGAGATACATAGCATATGAGAAACTGTGATTATCTGATCTGATTTCAGTGTTTGCCATATAATCAAAATCATTTTGAGTGTGCAGTATATTTCAAACATTGTCTCTTCACCTAATGATTCATATTTTATACACAGCTATTATACCAGATTAACCACTATTTTACTGATCGTCATTCATGTCTAAAgtacaacatttatttttatataaaaagtaaTTTGATAACATGTAATTCATTTGACACTGTTTTGCGATTTTATTTGTGAAtaaatatcagaatcagaa

Function

NR:

description
PREDICTED: pituitary tumor-transforming gene 1 protein-interacting protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817087.1 True 961 mRNA 0.41 7 15502117 15505588

Neighbor

gene id symbol gene type direction distance location
myo10l3 LOC103370188 coding upstream 1920 15443454 ~ 15500197 (+)
ankzf1 ankzf1 coding upstream 75439 15420802 ~ 15426678 (+)
tmem41aa tmem41a,LOC103374480 coding upstream 153309 15345051 ~ 15348808 (+)
smarcal1 smarcal1 coding upstream 225934 15264124 ~ 15276183 (+)
xrcc5 xrcc5 coding upstream 278877 15216368 ~ 15223240 (+)
fmnl2a fmnl2,LOC102797926 coding downstream 9873 15515461 ~ 15565842 (+)
kcnj3a kcnj3 coding downstream 162690 15668278 ~ 15696574 (+)
LOC120570324 NA coding downstream 397099 15902687 ~ 15909852 (+)
upp2 upp2 coding downstream 472698 15978286 ~ 15980899 (+)
LOC120570318 NA coding downstream 507977 16013565 ~ 16096337 (+)
LOC120569294 NA non-coding upstream 85913 15415408 ~ 15416204 (+)
LOC120569306 NA non-coding upstream 252288 15243198 ~ 15249829 (+)
G123989 NA non-coding upstream 270434 15226085 ~ 15231683 (+)
G123967 NA non-coding upstream 420971 15079454 ~ 15081146 (+)
G123931 NA non-coding upstream 486819 15013151 ~ 15015298 (+)
G124150 NA non-coding downstream 30947 15536535 ~ 15567461 (+)
LOC120570206 NA non-coding downstream 210018 15715606 ~ 15739958 (+)
LOC120569337 NA non-coding downstream 382549 15888137 ~ 15891006 (+)
G124229 NA non-coding downstream 406627 15912215 ~ 15912428 (+)
G124323 NA non-coding downstream 775011 16280599 ~ 16280878 (+)
trpm2 trpm2 other upstream 343180 15137587 ~ 15158937 (+)
si:dkeyp-118h9.7 LOC102200331 other upstream 508283 14976595 ~ 14993834 (+)
G123742 NA other upstream 1268047 14233332 ~ 14234070 (+)
cps1 cps1 other upstream 1805783 13635554 ~ 13696334 (+)
G123633 NA other upstream 2148032 13353306 ~ 13354085 (+)
sumo3b sumo3,LOC106562996,LOC107668404,LOC106523318 other downstream 1396 15506984 ~ 15573848 (+)
galnt13 galnt13,LOC102796746 other downstream 112926 15618514 ~ 15661014 (+)
LOC120570321 NA other downstream 465394 15970982 ~ 15977874 (+)
dap1b dapl1 other downstream 593683 16099271 ~ 16101642 (+)
col28a2a LOC103355072,LOC104961148,LOC102781941 other downstream 1482483 16988071 ~ 17023560 (+)

Expression


Co-expression Network