LOC120569293 (LOC104943022,LOC104919017,LOC103370185)


Basic Information

Item Value
gene id LOC120569293
gene name LOC104943022,LOC104919017,LOC103370185
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 15414619 ~ 15417910 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817116.1
ACCACTTCCGGGGGATGTATCAgagcccggatagctcagtcggtagagcatCAGACTTTTAATCTGAgggtccagggttcaagtcccTGTTCGGGCGAtagaatttttttctttttacaatgtATTGAAGATGAGAATATGTTATTAACACATGGGTTTTGCGAGTGTTATTTAGCATATGAAATTAGAAGCGCGGCATAGTAATTGTTGGTAAACTTAGCTTCAGTAGAAAGAAAACACCACTCCTGTTAAATATATAAGAAATCCAAAGCTTAAAATTGCCCAAAATCCTGTGCCAAACATTAAACCATTTAATTTAAAACTAGTCATTGAAGTGGAGCTGTTATTACCCACAGTGAAACCTCACATTATCCTACTGTTTGAGTTGTTGTTTATGAATGAATCAAACTAATTTGGGGATTAAACTTACTCATAAACAAACAACAGTAACCTATAATTTACCTGAGATAATCATGGGTATTATCTCTGGACAGTGATTGGAAACGCCTATAAAGCTAGGTGTTTGTGCAGGGAAAATGGCAGCACTGAAGGCATCAGACTGGCAAAGATGGAGCGGATTATCATCTTGTGCCTGGTTTCTACCTGTCTCTCGGCGGTACATGCTCAGACATTTTTGTTCAGCCCAAAATGGGGCCCCATTGGCTATAAAGAACCTGAAGAGTATGAGGGGACAGCAATGGATGAAATCATTAAAGCTAATGAGTTCCAAGCTTCCCGAATCATAGACGGCACTACCAGTCTCCGAGACGGAGACATTGCTGTTTCTTCTGGAAGGCGCTCCAAAGTCTGCTTCGCCCGTAGCTGCCTCTGGTCTAAGTCAGTGGATGGACATGTCTATGTTGCATATAGACTCTCACCTGAATACTCTGAAATTGAGACAAAGCTGATAAAGAAAGGGATGGAAAGCATGGAGAAAGGTACCTGTGTGCGGTTTGTTCCTCGGACTCACCAGCGAGACTACGTCGACATCCAGCCAAAGTCTGGTTGTTGGTCCTACCTTGGTGCGCGTGGTGGAAGACAGACCGTGTCTCTCCAGAGCCCTGACTGCCTCCAGGTTGGAGTGATCGcccatgaattcatgcatgccCTAGGCTTTGTGCACGAGCAGTCTCGCTCTGACCGGGACAACTATGTCACCATCATGTGGCCGAACATTTGGAGGGATCGGTTAAGGAACTTTGAGAAGTTTAAGACTGACAGTCTGGACCTACCATATGACTATGGCTCAATCATGCACTTTGGGATGTATGCCTACTCTCAGGATGGGCAGCCAACCATCATTCCTAAGAACAGCCACAACAGCAAGGACATAAAGCTGGGCCAGGCATCGACTCTCAGCCACATTGACCAGATGAAAATCAACAAGCTTTATAAATGTGGTGGCATGGATGAATACTAATCAAACTGATTAAATGTGAAACAGGAATGTGATAGCTAATATAATAAACTGATCTAAATCATGGAAACAATTTCAATAAAGATTGATTCAAGCTTTC
>XM_039817117.1
AGGTGCAGAAGACAGAATGTGTTTTACATTCTAATCCTGAGACCAAATTCTCCTCAACTCAAGTTAACCAATCCAACGCTACATACAGACTTTAATAACGTGATTGGAAACGCCTATAAAGCTAGGTGTTTGTGCAGGGAAAATGGCAGCACTGAAGGCATCAGACTGGCAAAGATGGAGCGGATTATCATCTTGTGCCTGGTTTCTACCTGTCTCTCGGCGGTACATGCTCAGACATTTTTGTTCAGCCCAAAATGGGGCCCCATTGGCTATAAAGAACCTGAAGAGTATGAGGGGACAGCAATGGATGAAATCATTAAAGCTAATGAGTTCCAAGCTTCCCGAATCATAGACGGCACTACCAGTCTCCGAGACGGAGACATTGCTGTTTCTTCTGGAAGGCGCTCCAAAGTCTGCTTCGCCCGTAGCTGCCTCTGGTCTAAGTCAGTGGATGGACATGTCTATGTTGCATATAGACTCTCACCTGAATACTCTGAAATTGAGACAAAGCTGATAAAGAAAGGGATGGAAAGCATGGAGAAAGGTACCTGTGTGCGGTTTGTTCCTCGGACTCACCAGCGAGACTACGTCGACATCCAGCCAAAGTCTGGTTGTTGGTCCTACCTTGGTGCGCGTGGTGGAAGACAGACCGTGTCTCTCCAGAGCCCTGACTGCCTCCAGGTTGGAGTGATCGcccatgaattcatgcatgccCTAGGCTTTGTGCACGAGCAGTCTCGCTCTGACCGGGACAACTATGTCACCATCATGTGGCCGAACATTTGGAGGGATCGGTTAAGGAACTTTGAGAAGTTTAAGACTGACAGTCTGGACCTACCATATGACTATGGCTCAATCATGCACTTTGGGATGTATGCCTACTCTCAGGATGGGCAGCCAACCATCATTCCTAAGAACAGCCACAACAGCAAGGACATAAAGCTGGGCCAGGCATCGACTCTCAGCCACATTGACCAGATGAAAATCAACAAGCTTTATAAATGTGGTGGCATGGATGAATACTAATCAAACTGATTAAATGTGAAACAGGAATGTGATAGCTAATATAATAAACTGATCTAAATCATGGAAACAATTTCAATAAAGATTGATTCAAGCTTTC
>XM_039817118.1
AGGTGCAGAAGACAGAATGTGTTTTACATTCTAATCCTGAGACCAAATTCTCCTCAACTCAAGTTAACCAATCCAACGCTACATACAGACTTTAATAACGGGAAAATGGCAGCACTGAAGGCATCAGACTGGCAAAGATGGAGCGGATTATCATCTTGTGCCTGGTTTCTACCTGTCTCTCGGCGGTACATGCTCAGACATTTTTGTTCAGCCCAAAATGGGGCCCCATTGGCTATAAAGAACCTGAAGAGTATGAGGGGACAGCAATGGATGAAATCATTAAAGCTAATGAGTTCCAAGCTTCCCGAATCATAGACGGCACTACCAGTCTCCGAGACGGAGACATTGCTGTTTCTTCTGGAAGGCGCTCCAAAGTCTGCTTCGCCCGTAGCTGCCTCTGGTCTAAGTCAGTGGATGGACATGTCTATGTTGCATATAGACTCTCACCTGAATACTCTGAAATTGAGACAAAGCTGATAAAGAAAGGGATGGAAAGCATGGAGAAAGGTACCTGTGTGCGGTTTGTTCCTCGGACTCACCAGCGAGACTACGTCGACATCCAGCCAAAGTCTGGTTGTTGGTCCTACCTTGGTGCGCGTGGTGGAAGACAGACCGTGTCTCTCCAGAGCCCTGACTGCCTCCAGGTTGGAGTGATCGcccatgaattcatgcatgccCTAGGCTTTGTGCACGAGCAGTCTCGCTCTGACCGGGACAACTATGTCACCATCATGTGGCCGAACATTTGGAGGGATCGGTTAAGGAACTTTGAGAAGTTTAAGACTGACAGTCTGGACCTACCATATGACTATGGCTCAATCATGCACTTTGGGATGTATGCCTACTCTCAGGATGGGCAGCCAACCATCATTCCTAAGAACAGCCACAACAGCAAGGACATAAAGCTGGGCCAGGCATCGACTCTCAGCCACATTGACCAGATGAAAATCAACAAGCTTTATAAATGTGGTGGCATGGATGAATACTAATCAAACTGATTAAATGTGAAACAGGAATGTGATAGCTAATATAATAAACTGATCTAAATCATGGAAACAATTTCAATAAAGATTGATTCAAGCTTTC

Function

NR:

description
PREDICTED: low choriolytic enzyme-like isoform X2

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K08076 E3.4.24.21; astacin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817116.1 True 1517 mRNA 0.43 9 15414619 15417296
XM_039817117.1 False 1123 mRNA 0.46 10 15414619 15417910
XM_039817118.1 False 1086 mRNA 0.46 10 15414619 15417910

Neighbor

gene id symbol gene type direction distance location
LOC120569292 LOC103370192,LOC103461666,LOC104943023,LOC100710321,LOC105937152 coding downstream 840 15411570 ~ 15413779 (-)
tra2b tra2b coding downstream 5148 15402680 ~ 15409471 (-)
igf2bp2a igf2bp2 coding downstream 15512 15352449 ~ 15399107 (-)
ehhadh ehhadh coding downstream 69923 15333900 ~ 15344696 (-)
zgc:162707 cunh3orf70,LOC102778299 coding downstream 81392 15322355 ~ 15333227 (-)
glb1l glb1l,LOC100708354,LOC102776574,LOC102302597 coding upstream 8889 15426799 ~ 15432513 (-)
prpf40a NA coding upstream 150089 15567999 ~ 15585951 (-)
rprma rprm,LOC102780493 coding upstream 196764 15614674 ~ 15615857 (-)
nr4a2a nr4a2,LOC106586168,LOC104920078,LOC103363922 coding upstream 394774 15812684 ~ 15817665 (-)
LOC120570325 NA coding upstream 492036 15909946 ~ 15911626 (-)
G124014 NA non-coding downstream 218401 15178318 ~ 15196218 (-)
G124001 NA non-coding downstream 290674 15116194 ~ 15123945 (-)
G124000 NA non-coding downstream 291165 15115730 ~ 15123454 (-)
G123959 LOC102200331 non-coding downstream 430204 14984014 ~ 14984415 (-)
G123948 NA non-coding downstream 475045 14939331 ~ 14939574 (-)
G124136 NA non-coding upstream 57348 15475258 ~ 15476148 (-)
G124146 NA non-coding upstream 84838 15502748 ~ 15504712 (-)
LOC120569338 NA non-coding upstream 446622 15864532 ~ 15901689 (-)
G124304 NA non-coding upstream 684246 16102156 ~ 16102355 (-)
G124324 NA non-coding upstream 862674 16280584 ~ 16280878 (-)
G123960 NA other downstream 420830 14984485 ~ 14993789 (-)
G123886 NA other downstream 620122 14784561 ~ 14794497 (-)
ikzf2 ikzf2 other downstream 1212890 14175814 ~ 14201729 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other downstream 2794804 12619353 ~ 12619815 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other downstream 3169614 12232420 ~ 12245005 (-)
G124303 dapl1 other upstream 681368 16099278 ~ 16101593 (-)
LOC120570587 LOC100705152,LOC102292123,LOC101476258 other upstream 789780 16207690 ~ 16222736 (-)
gcgb gcg other upstream 960578 16378488 ~ 16380765 (-)
LOC120570068 LOC103362129,LOC101485094 other upstream 963340 16381250 ~ 16389894 (-)
fastkd1 fastkd1,LOC102780871 other upstream 1617463 17035373 ~ 17042372 (-)

Expression


Co-expression Network