LOC120569295 (grpr,LOC103352898,LOC100697445,LOC101071331,LOC101471274,LOC102795360)


Basic Information

Item Value
gene id LOC120569295
gene name grpr,LOC103352898,LOC100697445,LOC101071331,LOC101471274,LOC102795360
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 20715586 ~ 20719763 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817119.1
GCCATGTCTCTGGAGGACCCACTCGTTATGAGCCCAGAGGACAGCAGTGTTCTGGTTCTCAATGCCTCCACAGGGGAGCAGCACCAATACAACATCTGGTTCCCGGGTATCGGGATCGCTGCTGTCTACGGGATCATCATCATCGTGGGTCTATTGGGAAATGTCACGTTAATGAGGACGTGTCTAACGGTGAAGTCCATGAGGACGGTGCCCAACTTGTTCCTGTCCAGTCTGGCTCTGGGGgacgtgctgctgctgctgacctgCGCCCCGGTGGACGCCAGCCGCTACCTGGTGGACGAGTGGCTCTTCGGCCGCGTTGGATGCAAACTGATCCCGTTCATCCAGCTCACCTCTGTGGGAGTCTCGGTGTTCACCCTCACTGCTCTCTCCGCTGACCGGTACAAAGCAATAGTCAGACCTCTGGACATCCACAGGTCCAGCGCTGCACTCAGTATCTGTTTTCGAGTGGGGGCCATCTGGCTGCTCTCTGTGACTCTGGCCATTCCTGAGGCCGTCTTCTCCGACCTGCACACCTTCACCACCAGCCACACCAATGAGACATTTGTGACCTGTGCGCCCTACCCCCACGCCAGGGAACTGCACCCAAAAATCCATTCCACCGCCTCCTTCCTCATCTTCTACATCATCCCGCTCTTCATCATATCAGTGTACTACTGCTTCATCGCTCGCAGTCTGGTCAGGAGCTCTGTGGACATCCCTGCTGAAGGGCACCTGCACCTCCAGAAACAGaTCAAGTCCAGAAAACGTCTGGCCAAAACTGTGCTGGTGTTTGTCGGCTTGTTTGCAGCCTGCTGGCTGCCCAGTCATGTCATCTACCTGTACCGCTCCTACCACTACGACCAGGTGGACACCTCGCTGGGCCACTTCATCGCCAGCGTATGCGCTCGCATTTTGGCCTTCACCAACTCCTGTGTAAACCCATTCGCCCTCTACCTGATGAGCAAAAGCTTTAGGAAACACTTCAACAAGCAACTCCTGTGCTGCACTTCTCCCAGACGCTTGTACAGTCAGAACAGTAGGAGCACAAACATAACCACTGTCTGAAAGCATCTGTGttttcataaataaaaaatataaaaaatgtttagcTCTCAACTATCCAGTGTAAGCCACAGAAATAACACAATATGCAGGAAGCCTCTAATctcttttaaaacaaaataaactgtTGATTCAATGAAATACAATCACTGCAGATGTAAAGTC

Function

symbol description
grpr Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human GRPR (gastrin releasing peptide receptor).

NR:

description
PREDICTED: gastrin-releasing peptide receptor-like

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0031989 bombesin receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004946 bombesin receptor activity molecular_function

KEGG:

id description
K04169 GRPR; gastrin-releasing peptide receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817119.1 True 1230 mRNA 0.52 3 20715586 20719763

Neighbor

gene id symbol gene type direction distance location
LOC120569729 LOC103352860,LOC100709268 coding downstream 50702 20649268 ~ 20664884 (-)
u2af1 LOC103352857,LOC103391595 coding downstream 78981 20630090 ~ 20636605 (-)
cbsb NA coding downstream 103925 20589788 ~ 20611661 (-)
ankrd10b ankrd10,LOC102292027 coding downstream 200383 20499453 ~ 20515203 (-)
ube2al ube2al,ube2a,LOC105934920,LOC104955100,LOC103021436,LOC103029486,LOC108259060,LOC107552373 coding downstream 216715 20492166 ~ 20498871 (-)
srpx srpx,LOC102777533 coding upstream 55315 20775078 ~ 20792247 (-)
rpgra NA coding upstream 75954 20795717 ~ 20809233 (-)
dcaf6 NA coding upstream 105011 20824774 ~ 20850992 (-)
rpl24 rpl24 coding upstream 141451 20861214 ~ 20865558 (-)
LOC120570677 NA coding upstream 144022 20863785 ~ 20863953 (-)
G125720 NA non-coding downstream 2437 20710865 ~ 20713149 (-)
G125708 NA non-coding downstream 18346 20691897 ~ 20697240 (-)
G125703 NA non-coding downstream 28673 20686696 ~ 20686913 (-)
G125701 NA non-coding downstream 31176 20683895 ~ 20684410 (-)
G125694 NA non-coding downstream 48181 20667046 ~ 20667405 (-)
G125784 NA non-coding upstream 37944 20757707 ~ 20759225 (-)
G125800 NA non-coding upstream 139836 20859599 ~ 20859991 (-)
G125839 NA non-coding upstream 190807 20910570 ~ 20910806 (-)
G125845 NA non-coding upstream 233169 20952932 ~ 20953578 (-)
G125848 NA non-coding upstream 254469 20974232 ~ 20976915 (-)
G125620 col4a2 other downstream 248401 20464109 ~ 20467185 (-)
G125619 col4a2 other downstream 253957 20459162 ~ 20461629 (-)
si:ch211-214p13.7 NA other downstream 791851 19921268 ~ 19923735 (-)
LOC120570223 NA other downstream 919366 19790052 ~ 19796220 (-)
si:ch211-214p13.3 NA other downstream 947000 19751701 ~ 19768586 (-)
LOC120570047 dynlt3 other upstream 14787 20734550 ~ 20738320 (-)
G125842 NA other upstream 233898 20953661 ~ 20960064 (-)
LOC120569741 LOC104951940,LOC103391685,LOC103352881 other upstream 259238 20979001 ~ 20986633 (-)
tmtops2b LOC100693281,LOC102294429,LOC102792754,LOC101463828,LOC102207603,LOC103352886 other upstream 391424 21111187 ~ 21149005 (-)
ecrg4a Augurin-B,LOC103352889 other upstream 473145 21192908 ~ 21198088 (-)

Expression


Co-expression Network