LOC120569317


Basic Information

Item Value
gene id LOC120569317
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 8887863 ~ 8901784 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817175.1
cttATCTTACCAGCTTTTTTAagtgtgtcttgtctgtctAAACTGGTTTTAGAGCAATGCAGAACAGGAGGGCATCGGAGTGACCGGTCACAACAGACTGAGGCAGCATGGCACATTGAGGATAAAAACAACCAGGCCTGAAGAAATAATGGAGAGTATTGTCAAGTTTGTGGATGAAATCCTGAACATGGTGGGATCCTCTGACGATTCCTCTCCCCTACCTCCCTTGAAGGACTACAAGGAAGAACTACAGTCACTCCAGATTAAAATGGAGgtagaaaaagagaaaggacAGCTGAGGGATGAGATGCTAAAGGAGCTGCGTTCTGATAAACTCCACCTGCAGCAACAAGTGGCTCACATGGAGAAACACCTACAGCTGCAggcagagaaggaggagaagaatgtcCAACAAGTCAAATCTGCCTCTCCCCTACCTCCCTTGAAGGACTGCAAGGAAGAACTACAGTCACTCCAGATTAAAATGGAGgtagaaaaagagaaaggacAGCTGAGGGATGAGATGCTGAAGGAGCTGCGTTCTGATAAACTCCACCTGCAGCAACAAGTGGCTCACATGGAGAAACACCTACAGCTGCAggcagagaaggaggagaagaatgtcCAACAAGTCAAATCTGgccccggGTGTCCTGTGCTTCCGGGCCGAGTAGACCTACTGGAAAACTCAGAGGCGGTGTCTGACCATGCAGTGGTACGGGAAAGTCTAACAGGTCTGTATCCATCTCTGGAAAAGAGAGTCCAGTTCCGTTGGATTCACCAAAGAATTCGTAGTATGGAAGACATTTGGGTCAAGGCTGGACGCTCTCTGTCAGCCAAATACAACCTCACAGAGAGGAAAGCTAAACAGATTCTGGTACATCCCGGAGTAGTGACCGATGAATCGGGTGCTAGAATAGCAGAGGCTGCCTTCAGTGGGGGCCCTCTTGGGGAACTAGTCCAGTGGAGTGACCTCATCTCCACACTTCACATCCTGGGTCACCAACTTCACCTTACTGCCTCCATACCCGACCTCAAGCAtTTTCTAGAGATTAAGACAGGTGGCTGCCCAACTCATCATACAAAAGTGGAAGCAAACCTGATCTATACAGATATTATCGGCCTTAGACAGATTCAGGCAATACTACAGGCATCGTGGATCAAATACAGGTGTAGGATTCGTGTGTTGGATACTTTCGGCACTGAGCCAGACTTCAATCATGTAGATTGGGCCAAAGAGCACAACCTTCAGAGTCCATATGGCAGCCTGAACCTGATTCCAATGCAGTTCTACACCATGTTCCCTCATACACCAGACAACACCTTTCTGGGCTTTGTGGTGCAGCACCAGCGAAGCTCTGAAGAAACTGAGCGCTTAAAGTCTACCACAAGACAAAACCAGGCACTTGTGTATGGCAAGAGAGCCACGTTTTGGGAGGGTAAAGAGGCATATCTGGATGTTATCCACAAGTACTTGGAGATCCATGGGACTGTCGATCAAAGTGCTGGGATTCCAGACTATGTGAAAAACCACGGCATTATCAGAGGCACCGAGGTTCAGGCCCTGTTGAGACAGAGCAAGGTTTTTGTCGGATTGTCTTTCCCATATGAAGGCCCCGCCCCATTGGAGGCCTTAGCCAATGGCTGTGCTTTTCTGAACCCCAGGTTACACCCTCCGCAAAGTAGCCTGAACACCGAGTTCTTCAAGGATAAGCCCAACATCAGAGAGGTGACATCCCAGCATCCTTATGCCGAGGCCATAGGAGAGCCCTACGTATGGATGGTAGATATGCACAACTCCACAGATGTGGAGAGAGCTCTCACTGCTATCCTCAATCAGACTATTGAGCCCTACCTTCCCTATGAGTTTTCCTGTGAAGGGATGCTCCAGAGGGTCAACATCCTGATAGAAAAACAGGTTGGAGGAATGTTGGTTTATGGGATGGGATTTTgcaattattatattatcatttTCTTCTCATCTTTACCTCAGGACTTCTGCAATAGTACATGGAGCTGGCCCCCACTGAGTGCACTCCAGGTTGTGAAGGCAGAGGCAAAGACTTCCTGTAAACAGGCATGCCAGAAGATGGGGCTGATCTGTGAACCTACATTCTTTCCACATCTTAACAGCGCCGACAATCATGCCAAATATGGTGTAGATTGTCAAACATCTGAGTTTTCTGACAGTCACTTGGTGTTTCCAGCCTACAACAGCAGTAGTAAACACTGTGTGCTCCAGTCCGACCCCCTGCTCTTCAGCTGTGTGAGATCAGACCAGTCCTTGATTCGCATCTGCCCCTGTAGGGACTACATTAAGGACCAGATAGCCTTATGCCAGGCATGTATCTAACTGCTGGATAGAAAACAATATGTACATGAATgtcaataaaaatgatttatgtGGGTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817175.1 True 2413 mRNA 0.48 15 8887863 8901784

Neighbor

gene id symbol gene type direction distance location
acmsd acmsd coding downstream 77277 8804375 ~ 8810586 (-)
ramp1 ramp1,LOC100698743,LOC101467429,LOC102789017 coding downstream 115941 8701569 ~ 8771922 (-)
LOC120570417 NA coding downstream 302345 8584580 ~ 8585518 (-)
adarb1b adarb1,LOC101485294,LOC102308976,LOC100709054 coding downstream 305287 8442118 ~ 8582576 (-)
asb1 asb1,LOC102790951 coding downstream 490338 8387273 ~ 8397525 (-)
pth2ra pth2r coding upstream 132128 9033912 ~ 9122327 (-)
mrasa mras coding upstream 244808 9146592 ~ 9175548 (-)
LOC120569925 LOC103368088,LOC100695821 coding upstream 474745 9376529 ~ 9474839 (-)
pard3bb NA coding upstream 622957 9524741 ~ 9773383 (-)
LOC120569366 LOC104944296 coding upstream 935257 9837041 ~ 9841570 (-)
G122863 NA non-coding downstream 2243 8881443 ~ 8885620 (-)
G122859 map3k19,LOC104941527 non-coding downstream 96965 8790664 ~ 8790898 (-)
G122858 map3k19 non-coding downstream 97307 8790317 ~ 8790556 (-)
G122838 NA non-coding downstream 164281 8647857 ~ 8723582 (-)
G122830 NA non-coding downstream 275169 8604526 ~ 8612694 (-)
LOC120569286 NA non-coding upstream 103545 9005329 ~ 9005993 (-)
G122934 NA non-coding upstream 315026 9216810 ~ 9287702 (-)
G122950 NA non-coding upstream 422616 9324400 ~ 9324800 (-)
G122952 NA non-coding upstream 425977 9327761 ~ 9330473 (-)
G122983 NA non-coding upstream 731720 9633504 ~ 9641776 (-)
ccnt2a ccnt2,ccnt2a,LOC104923135,LOC102200362 other downstream 84759 8793621 ~ 8803104 (-)
traf3ip1 traf3ip1 other downstream 439433 8399585 ~ 8448430 (-)
tmeff2a tmeff2 other downstream 1570231 7181931 ~ 7317632 (-)
pcbp3 pcbp3,LOC100710924,LOC107660579,LOC103138153 other downstream 2016651 6782446 ~ 6871212 (-)
LOC120569614 NA other downstream 2205869 6640881 ~ 6681994 (-)
G122878 NA other upstream 97678 8999462 ~ 9000123 (-)
stxbp5l stxbp5l other upstream 2038269 10940053 ~ 11094619 (-)
thsd7ba NA other upstream 2378826 11280610 ~ 11467939 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other upstream 3330636 12232420 ~ 12245005 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other upstream 3717569 12619353 ~ 12619815 (-)

Expression


Co-expression Network