zgc:101559 (LOC100710420,LOC104958630,LOC102797725,LOC103357227,LOC101463598)


Basic Information

Item Value
gene id zgc:101559
gene name LOC100710420,LOC104958630,LOC102797725,LOC103357227,LOC101463598
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 22629693 ~ 22632693 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817194.1
TTCAGTGCCGTTCACATCCAGATCGCGAGAAGATGAGCAATGGCAACAGAAAACAAACCTGGGGACGAATTTGATACCGTTTTCGGTCAAAATGACTCCTTAGAGCTGTCTTCGCACCACGATTATGAGACTGTACAAGCTCGGATTTTCAAGATAATAGTCATAGGAGATTCAAATGTGGGAAAGACGTGTTTGACTTACAGATTCTGCGGGGGCACTTTCCTGAAAAACCCGGAGGCAACGATCGGGGTCGATTTCAGAGAGAGGACGCTGGAGCTTGATGGGGAGACTATCAAGTTGCAGATCTGGGACACGGCAGGTCAGGAGCGTTTCAGGAAGAGCATGGTGGAGCACTACTACCGCAGCGTCCATGCCGTCATCTTCGTGTATGACGTGACCAGCCTCTCCTCCTTTGAGAGCATACCTGAGTGGATTGAAGAGTGCAGCCGACACTGTGTGGGCCCCCTTGTGCCCCGCGTCGTGGTGGGAAACAAGTGCGACCTGAGGGACCGCCGGGAGGTCCCCACCACGGCTGCCCAGTGTCTTGCCGACAGCTACAACTTCCCACTCTTTGAGACTTCAGCCAAAGAACCTGCTGAGAAGGAACATGTTGATGCCATCTTTCTAACTTTGGCTTATAGACTGAAGAGCCACAAACCCCTGAGACTGAAGCAGCCAAGTGAGAGCAATGTCAGTTATCTGTGGAACCAGAGAGAGCAGGAAGCAGCAACTTGCCAATGCTGATATCCCCTCCATCCTGTATGGATGTACTCAGGAGTGTGTAGGTCATTACAGGCTTTAGGATCAATAATGGTGCTGAGGAAATCAGCATTTCTTGCTAACGCTGAGACTGAATTCAGAAAGCCCTCTTATGATCATGAGATAGAAAATGAAGAAACATACTATGGTTTTACACTTTTCCCTGCCTGATGCAAGGCACAGCTTATGACACTATGATCCTATACGTTTTCACAATATTAAATCAACATTTCAATGAAATGCATGAATGGAAATGGAGGTATGCCAAACATTTGTAGCTCAAACTGCACATAAAATCACTTTGAGTCAATGAACAGAGAATTGCAGAGTGCACTTTAATTCGTAGACAAATTATATGCAATCAGCCGTCTATAGCACACAACTTATCTACATTATTCAATGCAGACAGTAAAGGGACAAAATAGAAGTAAAGGGACCAATAAGGTAAATTGAAACTGTGAAGAAAACCGTGCAATCATTTTCTTTAAGTTATGTTTTAAAGTGATATTTCAGttcttaaataaaatgcagcatGCGTTTTGGTGCTGTTGCTGAATGTGTATTTCTCAGATATAAATATGAACATAACCCGCTTTGTGTCCACTCATTCACCTACACTTCAGTTCTTTGGAGAGAGTTCACAAATGACAAAATGTAGCTGTCTTTTGGGACAAAATGCAAATCCACTGTTCACTTGAAAAGCATGAGTGAACACATGCTCAGCTGTCTTTGAAAAATGTTATGCTGTAAGGTATTTAATGGTATGAGATAAAATCACAATTGACTTGTTTGCATGTGTACAATAATGCAAATACTTTCCAGATATTTGTGAATATGTTAAGTTGCAAATGAATAAAGGTGGTTTTATCAGTA
>XM_039817195.1
TTCAGTGCCGTTCACATCCAGATCGCGAGAAGATGAGCAATGGCAACAGAAAACAAACCTGGGGACGAATTTGATACCGTTTTCGGTCAAAATGACTCCTTAGAGCTGTCTTCGCACCACGATTATGAGACTGTACAAGCTCGGATTTTCAAGATAATAGTCATAGGAGATTCAAATGTGGGAAAGACGTGTTTGACTTACAGATTCTGCGGGGGCACTTTCCTGAAAAACCCGGAGGCAACGATCGGGGTCGATTTCAGAGAGAGGACGCTGGAGCTTGATGGGGAGACTATCAAGATCTGGGACACGGCAGGTCAGGAGCGTTTCAGGAAGAGCATGGTGGAGCACTACTACCGCAGCGTCCATGCCGTCATCTTCGTGTATGACGTGACCAGCCTCTCCTCCTTTGAGAGCATACCTGAGTGGATTGAAGAGTGCAGCCGACACTGTGTGGGCCCCCTTGTGCCCCGCGTCGTGGTGGGAAACAAGTGCGACCTGAGGGACCGCCGGGAGGTCCCCACCACGGCTGCCCAGTGTCTTGCCGACAGCTACAACTTCCCACTCTTTGAGACTTCAGCCAAAGAACCTGCTGAGAAGGAACATGTTGATGCCATCTTTCTAACTTTGGCTTATAGACTGAAGAGCCACAAACCCCTGAGACTGAAGCAGCCAAGTGAGAGCAATGTCAGTTATCTGTGGAACCAGAGAGAGCAGGAAGCAGCAACTTGCCAATGCTGATATCCCCTCCATCCTGTATGGATGTACTCAGGAGTGTGTAGGTCATTACAGGCTTTAGGATCAATAATGGTGCTGAGGAAATCAGCATTTCTTGCTAACGCTGAGACTGAATTCAGAAAGCCCTCTTATGATCATGAGATAGAAAATGAAGAAACATACTATGGTTTTACACTTTTCCCTGCCTGATGCAAGGCACAGCTTATGACACTATGATCCTATACGTTTTCACAATATTAAATCAACATTTCAATGAAATGCATGAATGGAAATGGAGGTATGCCAAACATTTGTAGCTCAAACTGCACATAAAATCACTTTGAGTCAATGAACAGAGAATTGCAGAGTGCACTTTAATTCGTAGACAAATTATATGCAATCAGCCGTCTATAGCACACAACTTATCTACATTATTCAATGCAGACAGTAAAGGGACAAAATAGAAGTAAAGGGACCAATAAGGTAAATTGAAACTGTGAAGAAAACCGTGCAATCATTTTCTTTAAGTTATGTTTTAAAGTGATATTTCAGttcttaaataaaatgcagcatGCGTTTTGGTGCTGTTGCTGAATGTGTATTTCTCAGATATAAATATGAACATAACCCGCTTTGTGTCCACTCATTCACCTACACTTCAGTTCTTTGGAGAGAGTTCACAAATGACAAAATGTAGCTGTCTTTTGGGACAAAATGCAAATCCACTGTTCACTTGAAAAGCATGAGTGAACACATGCTCAGCTGTCTTTGAAAAATGTTATGCTGTAAGGTATTTAATGGTATGAGATAAAATCACAATTGACTTGTTTGCATGTGTACAATAATGCAAATACTTTCCAGATATTTGTGAATATGTTAAGTTGCAAATGAATAAAGGTGGTTTTATCAGTA

Function

NR:

description
PREDICTED: ras-related protein Rab-33B isoform X1

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0015031 protein transport biological_process
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817194.1 True 1632 mRNA 0.43 2 22629693 22632693
XM_039817195.1 False 1626 mRNA 0.43 2 22629693 22632693

Neighbor

gene id symbol gene type direction distance location
tspan7b tspan7 coding downstream 14470 22593022 ~ 22615223 (-)
LOC120570617 NA coding downstream 42802 22584890 ~ 22586891 (-)
bcor bcor coding downstream 102329 22493642 ~ 22527364 (-)
atp6ap2 atp6ap2,renr coding downstream 139279 22481950 ~ 22490414 (-)
impg2a impg2 coding downstream 189700 22410048 ~ 22439993 (-)
kbtbd7 kbtbd7,LOC102797434 coding upstream 1872 22634565 ~ 22638245 (-)
wu:fc50b12 LOC106098708,LOC104958628,LOC108232414,LOC105941296 coding upstream 6812 22639505 ~ 22641075 (-)
slain1a slain1 coding upstream 8448 22641141 ~ 22654985 (-)
cln5 cln5,LOC102794031 coding upstream 107960 22740653 ~ 22743701 (-)
acod1 acod1 coding upstream 114939 22747632 ~ 22750454 (-)
LOC120569264 NA non-coding downstream 149378 22478563 ~ 22480315 (-)
G126212 NA non-coding downstream 241524 22387712 ~ 22388169 (-)
G126211 NA non-coding downstream 242911 22386295 ~ 22386782 (-)
G126208 NA non-coding downstream 246321 22382648 ~ 22383372 (-)
G126188 NA non-coding downstream 279634 22251931 ~ 22350059 (-)
G126334 mycbp2 non-coding upstream 90433 22723126 ~ 22723591 (-)
G126341 fbxl3 non-coding upstream 100875 22733568 ~ 22737837 (-)
G126353 NA non-coding upstream 138019 22770712 ~ 22770920 (-)
G126486 itgbl1 non-coding upstream 878849 23511542 ~ 23518025 (-)
G126489 itgbl1,LOC102787049 non-coding upstream 901002 23533695 ~ 23535597 (-)
katnal1 katnal1,LOC106527129,LOC104958633 other downstream 578 22615496 ~ 22629115 (-)
si:dkey-100n23.5 LOC103357194,LOC107389748,LOC106527133,LOC108232487,LOC102079199,LOC107091445,LOC103391942,LOC106962244,LOC103134722,LOC104958636 other downstream 47286 22531634 ~ 22582407 (-)
senp7 NA other downstream 157771 22442212 ~ 22471922 (-)
LOC120569718 LOC104941591 other downstream 394836 22230333 ~ 22234857 (-)
cracdla NA other downstream 1166896 21455212 ~ 21462797 (-)
scel scel other upstream 22886 22655579 ~ 22665472 (-)
klf5b LOC104962226,LOC103357491 other upstream 329506 22962199 ~ 22967901 (-)
gpr18 gpr18 other upstream 477340 23110033 ~ 23123908 (-)
si:ch211-218d20.15 LOC104960513,LOC101470276,LOC102197480,LOC102292608,LOC107099189,LOC100692635 other upstream 1322153 23954846 ~ 23957206 (-)
cnga4 cnga4,LOC103356095 other upstream 2038529 24671222 ~ 24679011 (-)

Expression


Co-expression Network