zgc:113337 (cd200,LOC103369899)


Basic Information

Item Value
gene id zgc:113337
gene name cd200,LOC103369899
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 19934150 ~ 19943910 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817224.1
CAGAACTCTTCAGCATCCATCCAGTCAACTGAAGTTTGGAGCTGACGCCGGCTGGTGTTCATTGTGCTGCTGGTGCGCAGAAAAGAAAACACGGAGGAGGAAAAATAGTTTCTCGGTCTGGACGACTGCTGGGTTATAAGGACGGGCAAGATGTTGCAGAGGTAGAACATATTCAACAGTTGGCGTTTACCTTTTGCATCAGGACAAGTAGAGTAccactcttcctcctccctgtTAAATGAGCGATGAAGAAGATGGTGATCCAGGCCTCCTGTAGGAAaggtctgcatgtgtgtttactCCTGATGATGGTGGGAAGACTACAGGATGTTTCAGGCAGGGTAACAGCACCCGAGCGTCTGGAAGCTCCAGTGGAGAAGCCCTTCACTCTGATGTGCAGTGTTTCTAGGGAACGAGGGGAGTCTCTAAGGCAGGTGCGTTGGTTGGATGCCCAGAACAAGACCCTGCTGAGCTACCAACCTGGCAACAGAGACAGTGTGAGTGGACAGCAGTATGTGGAGCTCGCCCCTTCCCCGAAAGACACCTCGGCTATCACCATCCGCAGGGTGGGCTTCCGTGATGAAGGCTGCTACACCTGCATCTTTGACATGCATCCTTCCGGTTCAAAGCAGGGACAGACTTGCCTCACTGTTACCTCACAAGTCACCGTTGAAAGCAACAAGACAGCAGTGAGTGGCAAGAAGGCCTCCTTCATGTGCTCCTACGGTTTGCCTGAAAAGGTGCAGCAGATTATATGGAGACACAATTCTGCACAAGGAGAATCCACAGAGGTGGCCTCCTTTGCAAAGCGGAGCGACCCCATGATAGAGCCTACGTTCCAGGGGAGAGTCTGGCTGAGTGCCTCCCTGTCCCACAGTGAGCTCACCATCCAGCCTGTCACCATCCAGGATGAGGGCTGCTACACGTGTCTGTACAACACACATCCCGACGGACCGAAGACCTCCACGGTTTGCCTCGCCATCTATGTCCTGCCAAAACCTCAGGTGAGCTACAAGACCACCTCGCCAGGTGTAATCGAAGCCAATTGCACCTCAGTGTCACGCCCCCCGACAGAGATAGTTTGGAACGTGGAGAGGGATAACAGAACCATGGGCCCCCCTGTGACGACACAGCTTCCACAGAGCGATGGGACCACTCTGGTCATCAGTACGCTGACTGTCCAATCTGGGCTGCTGAAAGACGTGTCCATCAAATGCTTGGTCCACCACAAAGGGCTTGAGTCACCAATTGCTGTATCCATGAACACTAAAATTGGGACGGCTCTCACCATCCTGATCTCAGTCACTACAGTGGCTGCCCTGTTGGTCATGTCCCTCTGCTTCTGCCTTTGGAAGTGTTTCTTGCGCAAAGAAGCTGATTAATCTCTCAGATGAGACCAGAGGCTAAAAAGAAGAGGCAGTGCTTCTCAGAGCCGACCTTGCAGAATTGTTTCActgtgtcatcatcatcatcctcatcatcatcttgGTAAGAAGGGAAGATGTTCTGACACACCTCTATACAGTAGGATGTCGAATACAATCCTATTGAGGGACGCCAACAATACCACGACATTCATCTCTGCTCTTCTTCCTCAGCATCTGACTTTTATATAATCTCCAGGCTGTCTTCACATGGAATCAGTGAGGAAATGTTGAGCGGtccatgtttttctttctggctctgtaattgATTGAGGCGATGGACACACGTTTTTGCAACACACAGCAGAGTCACTGTATGACAAATTAAAGTACAGTGGTTTTGCTGTTACAACATA
>XM_039817225.1
CAGAACTCTTCAGCATCCATCCAGTCAACTGAAGTTTGGAGCTGACGCCGGCTGGTGTTCATTGTGCTGCTGGTGCGCAGAAAAGAAAACACGGAGGAGGAAAAATAGTTTCTCGGTCTGGACGACTGCTGGGTTATAAGGACGGGCAAGATGTTGCAGAGGTAGAACATATTCAACAGTTGGCGTTTACCTTTTGCATCAGGACAAGTAGAGAAGATGGTGATCCAGGCCTCCTGTAGGAAaggtctgcatgtgtgtttactCCTGATGATGGTGGGAAGACTACAGGATGTTTCAGGCAGGGTAACAGCACCCGAGCGTCTGGAAGCTCCAGTGGAGAAGCCCTTCACTCTGATGTGCAGTGTTTCTAGGGAACGAGGGGAGTCTCTAAGGCAGGTGCGTTGGTTGGATGCCCAGAACAAGACCCTGCTGAGCTACCAACCTGGCAACAGAGACAGTGTGAGTGGACAGCAGTATGTGGAGCTCGCCCCTTCCCCGAAAGACACCTCGGCTATCACCATCCGCAGGGTGGGCTTCCGTGATGAAGGCTGCTACACCTGCATCTTTGACATGCATCCTTCCGGTTCAAAGCAGGGACAGACTTGCCTCACTGTTACCTCACAAGTCACCGTTGAAAGCAACAAGACAGCAGTGAGTGGCAAGAAGGCCTCCTTCATGTGCTCCTACGGTTTGCCTGAAAAGGTGCAGCAGATTATATGGAGACACAATTCTGCACAAGGAGAATCCACAGAGGTGGCCTCCTTTGCAAAGCGGAGCGACCCCATGATAGAGCCTACGTTCCAGGGGAGAGTCTGGCTGAGTGCCTCCCTGTCCCACAGTGAGCTCACCATCCAGCCTGTCACCATCCAGGATGAGGGCTGCTACACGTGTCTGTACAACACACATCCCGACGGACCGAAGACCTCCACGGTTTGCCTCGCCATCTATGTCCTGCCAAAACCTCAGGTGAGCTACAAGACCACCTCGCCAGGTGTAATCGAAGCCAATTGCACCTCAGTGTCACGCCCCCCGACAGAGATAGTTTGGAACGTGGAGAGGGATAACAGAACCATGGGCCCCCCTGTGACGACACAGCTTCCACAGAGCGATGGGACCACTCTGGTCATCAGTACGCTGACTGTCCAATCTGGGCTGCTGAAAGACGTGTCCATCAAATGCTTGGTCCACCACAAAGGGCTTGAGTCACCAATTGCTGTATCCATGAACACTAAAATTGGGACGGCTCTCACCATCCTGATCTCAGTCACTACAGTGGCTGCCCTGTTGGTCATGTCCCTCTGCTTCTGCCTTTGGAAGTGTTTCTTGCGCAAAGAAGCTGATTAATCTCTCAGATGAGACCAGAGGCTAAAAAGAAGAGGCAGTGCTTCTCAGAGCCGACCTTGCAGAATTGTTTCActgtgtcatcatcatcatcctcatcatcatcttgGTAAGAAGGGAAGATGTTCTGACACACCTCTATACAGTAGGATGTCGAATACAATCCTATTGAGGGACGCCAACAATACCACGACATTCATCTCTGCTCTTCTTCCTCAGCATCTGACTTTTATATAATCTCCAGGCTGTCTTCACATGGAATCAGTGAGGAAATGTTGAGCGGtccatgtttttctttctggctctgtaattgATTGAGGCGATGGACACACGTTTTTGCAACACACAGCAGAGTCACTGTATGACAAATTAAAGTACAGTGGTTTTGCTGTTACAACATA
>XM_039817226.1
CAGAACTCTTCAGCATCCATCCAGTCAACTGAAGTTTGGAGCTGACGCCGGCTGGTGTTCATTGTGCTGCTGGTGCGCAGAAAAGAAAACACGGAGGAGGAAAAATAGTTTCTCGGTCTGGACGACTGCTGGGTTATAAGGACGGGCAAGATGTTGCAGAGGTAGAACATATTCAACAGTTGGCGTTTACCTTTTGCATCAGGACAAGTAGAGATGGTGATCCAGGCCTCCTGTAGGAAaggtctgcatgtgtgtttactCCTGATGATGGTGGGAAGACTACAGGATGTTTCAGGCAGGGTAACAGCACCCGAGCGTCTGGAAGCTCCAGTGGAGAAGCCCTTCACTCTGATGTGCAGTGTTTCTAGGGAACGAGGGGAGTCTCTAAGGCAGGTGCGTTGGTTGGATGCCCAGAACAAGACCCTGCTGAGCTACCAACCTGGCAACAGAGACAGTGTGAGTGGACAGCAGTATGTGGAGCTCGCCCCTTCCCCGAAAGACACCTCGGCTATCACCATCCGCAGGGTGGGCTTCCGTGATGAAGGCTGCTACACCTGCATCTTTGACATGCATCCTTCCGGTTCAAAGCAGGGACAGACTTGCCTCACTGTTACCTCACAAGTCACCGTTGAAAGCAACAAGACAGCAGTGAGTGGCAAGAAGGCCTCCTTCATGTGCTCCTACGGTTTGCCTGAAAAGGTGCAGCAGATTATATGGAGACACAATTCTGCACAAGGAGAATCCACAGAGGTGGCCTCCTTTGCAAAGCGGAGCGACCCCATGATAGAGCCTACGTTCCAGGGGAGAGTCTGGCTGAGTGCCTCCCTGTCCCACAGTGAGCTCACCATCCAGCCTGTCACCATCCAGGATGAGGGCTGCTACACGTGTCTGTACAACACACATCCCGACGGACCGAAGACCTCCACGGTTTGCCTCGCCATCTATGTCCTGCCAAAACCTCAGGTGAGCTACAAGACCACCTCGCCAGGTGTAATCGAAGCCAATTGCACCTCAGTGTCACGCCCCCCGACAGAGATAGTTTGGAACGTGGAGAGGGATAACAGAACCATGGGCCCCCCTGTGACGACACAGCTTCCACAGAGCGATGGGACCACTCTGGTCATCAGTACGCTGACTGTCCAATCTGGGCTGCTGAAAGACGTGTCCATCAAATGCTTGGTCCACCACAAAGGGCTTGAGTCACCAATTGCTGTATCCATGAACACTAAAATTGGGACGGCTCTCACCATCCTGATCTCAGTCACTACAGTGGCTGCCCTGTTGGTCATGTCCCTCTGCTTCTGCCTTTGGAAGTGTTTCTTGCGCAAAGAAGCTGATTAATCTCTCAGATGAGACCAGAGGCTAAAAAGAAGAGGCAGTGCTTCTCAGAGCCGACCTTGCAGAATTGTTTCActgtgtcatcatcatcatcctcatcatcatcttgGTAAGAAGGGAAGATGTTCTGACACACCTCTATACAGTAGGATGTCGAATACAATCCTATTGAGGGACGCCAACAATACCACGACATTCATCTCTGCTCTTCTTCCTCAGCATCTGACTTTTATATAATCTCCAGGCTGTCTTCACATGGAATCAGTGAGGAAATGTTGAGCGGtccatgtttttctttctggctctgtaattgATTGAGGCGATGGACACACGTTTTTGCAACACACAGCAGAGTCACTGTATGACAAATTAAAGTACAGTGGTTTTGCTGTTACAACATA

Function

symbol description
cd200 Predicted to enable protein binding activity involved in heterotypic cell-cell adhesion. Involved in several processes, including negative regulation of matrix metallopeptidase secretion; positive regulation of arginase activity; and regulation of DNA-binding transcription factor activity. Located in axon; cell surface; and neuronal cell body.

NR:

description
PREDICTED: OX-2 membrane glycoprotein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817224.1 True 1780 mRNA 0.51 7 19934150 19943910
XM_039817225.1 False 1742 mRNA 0.51 7 19934150 19943910
XM_039817226.1 False 1739 mRNA 0.51 7 19934150 19943910

Neighbor

gene id symbol gene type direction distance location
cfap91 NA coding downstream 20430 19908494 ~ 19913720 (-)
nr1i2 nr1i2 coding downstream 27073 19900242 ~ 19907077 (-)
LOC120569249 NA coding downstream 160119 19771293 ~ 19774031 (-)
gja5a gja5 coding downstream 218230 19704828 ~ 19715920 (-)
acp6 acp6 coding downstream 232131 19695451 ~ 19702019 (-)
pdzk1 NA coding upstream 9320 19953230 ~ 19958864 (-)
LOC120569358 fam155a,LOC104934532,LOC103370067,LOC102785965 coding upstream 82169 20026079 ~ 20118310 (-)
irs2b LOC104955106,LOC103372228 coding upstream 355171 20299081 ~ 20316292 (-)
col4a1 col4a1 coding upstream 397376 20341286 ~ 20389402 (-)
rab20 rab20 coding upstream 527697 20471607 ~ 20476349 (-)
G125460 NA non-coding downstream 34976 19898684 ~ 19899174 (-)
G125459 NA non-coding downstream 35768 19898002 ~ 19898382 (-)
G125458 NA non-coding downstream 36220 19897667 ~ 19897930 (-)
G125434 fstl1 non-coding downstream 73913 19817239 ~ 19860237 (-)
G125524 NA non-coding upstream 47498 19991408 ~ 19993321 (-)
G125539 NA non-coding upstream 199673 20143583 ~ 20144749 (-)
G125543 NA non-coding upstream 203506 20147416 ~ 20149179 (-)
G125551 NA non-coding upstream 286175 20230085 ~ 20232060 (-)
G125605 NA non-coding upstream 386598 20330508 ~ 20330715 (-)
si:ch211-214p13.7 NA other downstream 10415 19921268 ~ 19923735 (-)
LOC120570223 NA other downstream 137930 19790052 ~ 19796220 (-)
si:ch211-214p13.3 NA other downstream 165564 19751701 ~ 19768586 (-)
G125326 dopey2 other downstream 336629 19595929 ~ 19597521 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other downstream 675304 19231987 ~ 19258846 (-)
G125619 col4a2 other upstream 515252 20459162 ~ 20461629 (-)
G125620 col4a2 other upstream 520199 20464109 ~ 20467185 (-)
LOC120570047 dynlt3 other upstream 790640 20734550 ~ 20738320 (-)
G125842 NA other upstream 1009751 20953661 ~ 20960064 (-)
LOC120569741 LOC104951940,LOC103391685,LOC103352881 other upstream 1035091 20979001 ~ 20986633 (-)

Expression


Co-expression Network