LOC120569358 (fam155a,LOC104934532,LOC103370067,LOC102785965)


Basic Information

Item Value
gene id LOC120569358
gene name fam155a,LOC104934532,LOC103370067,LOC102785965
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 20026079 ~ 20118310 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817230.1
tgtgtgtttgtgtgtgtgtgtgtgtgtgtgtatataggtaATAAGCTGCTCCGCCACTGCGCAACGATGGAGCTATCGCAACGATGGAGATGACGCAAACCGACCCAGCTCTCCGAAAAAGTGTTTCAAGACGAACATGGCGGCAACTTAACCGCGGTCCAAGATGACAATGGCCAACGGGAGAAAGGATTCTAGGCTTTCCGCCCAGGTACCGGACAGTGTGCGTGCATCAAAAGGGCTCGTTGCTCTTCTTTAAGTGAATCTGCAAAACGAAAGGCGGCAGACGCGCAGCATCAGTACCGAGAGGCTCGCAACTGCTGGTCTCCCTGCGCCCCAGACGAGAGAACAAATCCGGGGAGGAACGGTAGGGAGAGGGGGGCATGCGGTCAAAGAGGACGCCGTTTCCCCCCGGAGAGCCATGGAGAACCGGGATGCGGCAGCGCGAAGCTTAATCTGTGCGGGCGCGCTAATTGGATCGGAGTAGCACCGATTGCTGCGGGCGCGATAGAGGAGCGCCCTGGACCGGCGGAGGCACGGCACCGTTACAGAGGAAAACCAACCGGAGTCCGTTTCCCCAAGTCAATGAGTATTGTGGCAGAGCAGCCCCCGCGGTGGAGTCGGCCAGGGCAGCACTTTCCTAAAATATGACCAGGGGTGCTTGGATGCGTCGGCAGCATGATGAGGGCTTAAAATACTGGTTTGCATCCCGAGAGAACGAGAAGCCATTTACCGAGTCGGAACGGGCCCAGAGATGGCGACTGTCGCTGGCCTCTCTGCTATTCATCACCGTCCTGCTCTCTGATCACTTGTGGTTCTGCGCCGAGGCAAAACTGACGCGAACCCGAGACAAGCGGTCGGACGAGGGGCTTGCAATTACGGACATGGGCGAGTACCCAAACTCCCTCCACCAACATCCAACATCACCTGACCCCAACCATCTCGCCAGAGAGCAAGATGTTATTTTTCTAGGGAATTCTACCAAACCTCTGTGGCGAATGGACACCTGTCATCCAGACAGCCTGTCCAAAGACTGCTTTACTTTCACGGACGCGAAGACCGTGTGCCTGGGCCTCTCCGGTAGAGGGGAAAAGGGGACACAGTTGGCGTACGTGAATCTGAGCGATTTGTACCTTTCTTTTTGTAATTCATACTCACTTTTGGATTTGTTTTACGGGTTTACGAGTCCGGACGATTTGAAATGCACCCTGGATATGGCCATGGGGGTAGACCTGCTGGGATGCAGCAAGTGTGTCCGGGCTTATCAGCTTCTTGACAAGCGGGCGGAGGACAACTACCGGGAGTTTGAACTGCTGGTTCAGAAATACGAGACGGATGCATACTCGGTCAGGACGTGCATGGAGGAATGCAAGATGGTTTATAAGCCCTGGCTGTGTTCTCAGTACTTCCAGACCACCCAGATGCACTGCAGTAAGCGAATCCCCTGTGGTCAGTACTGTCTGGAGGTGCAGCAGCGGTGCCCCTTTGTCCTGCCCGACAATGATGATCTCATTCATGGAGGAAGCCCCAGTTTTATATGCACAGGGCTGCTGGAGGACTATCCATCAGGTGTTGACCCAGATGCAGAGTGCTGTGACGTGCGGTGGGACTTGAAAGTGGACAACCGTTCCCGGGGGACCCTGAAAAGAACTCACCCACCATGCCAGCACCGTACCTCCCTCAGCTCCTCTGCAGCCTGCAGACTGTGTAACAGCCGGCTCAAACTCTGCCTCCTGGTCCTTGTCCTCCTACACACTGTTGCCAGCCTCACTgcatcccacaatgcaacaggACTGGGCCTCCCTGCCATTACGCCTCTGGAGGAAAGCCCTGCCAATGAGGAGTGATAGAGCTGCCAGGAGGATGTGAGGTGGTTGGGGTGGGGGACTCCCTCACCATGGCAACCAATGTGGAAAAATACAGCCGCAGTTGTGCGAACGGCTGGAGCTGTGTGCCTGTGGACATTCTGCAACGCTTTCTGGCAAATGGAAATTGTGGGACGCTGTAAGACGAAAGACACACAActcaatcaaaacaaataaataaggaaACAAACAGACATACTAAGGGACTCAACCAGTCCCTTAGATAGGAAGGGGACAATGCCTCAGCCTTTGTTGAGTGGGAAGGTCGGCTTCCCATGGCTGAGTTTCTCTCACTACGCTTTTTTACACTGTGTTCCAATTATTGGTTTCTGTTGCACTGGCTGACTATGGAATAACACAATCATATTCTCTTTCTAATGTTCatcctttgtgtttgtttctggtTCTCTCATACAGGAAGAAATGCGTTCTCTAAATAAGACAgacaatgtgtaaaaaaaattattaactgcaagtttgtgtgtgtgcaatggtTTGTGTTTCTagatttactgtgtgtgtgggtttgcgtgggcgtgtgtgtgcatgcatgtctttacacatgtgtgtatgtgagtgtatgagagggtgagtgtgtgttgctGACATGTACCCTAAAAGTCTAGCTAACAGGCTGTTGCAGCGATGATGTTTTatggaacccccccccccaaagatgTCACTTATTATAGCTCTGTCATGCTGGTTTGTTGGCCGCAATCCCAGTCAAACTTGACTGGGTTTTGAATGTGGTTTTGATGTCCATAATGAGGACTGTGTTTAATGGAGGTTTAAGGTTTTCCTACGCTTTGTTTTGTGAGATAATATTCACCTATTAACACAGATctaaacatttctgtaaatcagTAAACAGCTTACACCTGCTAAACTTTGAAACACATCAGGAACAAACAGCATGTATGCTTTCAATATCGCCAACATTGATATCTCAATTTTATTACAACTTGGGACCTCTTTTAATAGTTTTGACTATGATTCATATCACTGAAGTCTGACAGGGGAAAATACTTATATGGCAGAAAGAATGAAGGCTGAGTGTGTGCACACAGTTTTCCTGCGTAATGAAGGATTATTATAATCATTTTGGGTGCACTAACTTTTAGTTTTACGCCAAATACAAAGAACTGATAGCTTGTCTCTAATTTATGTTTAATATATGTCATCTGACTGCTTGAGTTTCTTGCCCCATTGGACTTCATTATAGTGATGTTGGTGTGTTGCCTGATCTCAGCAGTTACTTGGTTAAGTAAAATGTTATCATAATCAATAAAACTGATGACAAAAACTATACAAGTAAGACCCAAGCTGTATCAAACCATAATGATATTCAAGCTTCAGGTTAACACTACCATAGGGCTGAGCCACTTGGAAAATAATTTTACATAATAACAAATTTACAGAAATGTAGATAGCTTTTAATTAACATACTGACACAATTAAGAGGGAATCGTATCATTGGTGTTGGTAATTTTTGGTTCATTACCATTTAATAATTATAGTTGAAATTTTTATACCTTAAATAACTGTTAGCTATTAAATTTCCAGAATATAACATGAATATTTTGCTATAGATCTTTTATTGTTGACTTTTTAAAGAGTTTAAAGAGTTGTTCAACTAATACAcagcaaacaaaaacaacacagatagGATTTTATctcataaaacaaaacataaaactgtCAAGCTTGTCTTAACCGAAGATGTTATTTCAGGCATTTTACAAAAACCTCATTCAGATTGTGGCCACTTATCAGCAACATTGCTCAGCAAAGTTAACCAACATCAAGATTATAGCACCGGATCAATATTTAATATTCGTTGTTGTTCCAGACGAAGAAGcttttgttattttagttttaaaattttaaaggTACTATCCAGTCAAAATAATGTCCACAACAACTAAAAACAATGGGGACTGAAGGCTCCTTGTTCTCTTCTGCCTCAAGACCCTTGGTTCTTTTCCTTCTCCCTGCTGGTGACCAGCAGTTCAAGTACTAATAATTTTATTATATCATCACTCAAACAAAAACTCAATTTACGAAACAAAACTGACATCTACGTATATCAGTGGTGTCATTTTAACCTCAGGCCTTTTTATTTATAAGAAACATGATGACTGGATATTACCtttaagaacttttttttttataatgagtCAACTGTAAGTCTCATGCAGTTATTATGaagataaaatgtcaaagtctcACTAGAAATGTAACATGCTACTTGCAGTAGCATAAAGGAAAATCCCCAGTCTACTAATACAGTAGATATATTATACTACCCCATTCCCTGGCCATACAGTACGTATAGAATGATACTCTACatatcatcaacagtttgttTCTGTTGAATCCAAACGTGTAATCGATTTTCATGAACTGCATGTGGAGGCTCTTTGCAATGTTATGTCTCTTATGTTGATTGTCCTCAGCCCCACTCCGCACTCCACATCTGATCCCAAATCAGCTCCTGTAGCATGCCCACTGTCCTCTACTTTTCTCCTCAAAACATCAAACTAATGTTTCATTAAGTAAAGGGCTTATtaagatatacagtacaaacatcATAATCACATGCACATGCAAAATTGTTAGAAGACAAAGGGTAAAACTTGGCTCACTTCCTGTTTCTTTTTAAACTGGTATACCTGTAGTGCAGAGGCATTCCACTGGCTGTTGCCGGAGAGCAGGTACAGAAACAAATCCAGAGAGAGGAGCATGTCACTGTTTGAGTTAGCACTAATGGCATAACCTGATAATCGTCCAAGTCAGCTGACACTTGGAATGTCAGAGGAATGGTATGACCTCAAGGGCTGACTTCTTCTTTAGTTTCTCAATTTTGTTTTGTCTCTTCGATGAACAAGGCTGTGAGATCAGGTATTTAAAGATAAAATGTTGTTGAATGCATTCTTTTCCACTCTCTGATTTCTTAAATGAGATGTCCAATTTGATGTCAAGAATTTTATTATACAGCTTATATGagaatttaaaatacatcattATTCATATACAACCAGTATATTGGCTTATTTTGACATATATTCAGTTTAGACCCTGCCCCCGCTAGACCTTACCATTACTGCTTGCATGAAATACATTAAAAGGAACTCATTCAGAACAGCACACCCATGCCCATCTTGGATGGCTGCAGTCAGTAACAGAAAAATGCTGCTATTCTATTGGTTACCAGTAGATGGAgatatttttattcttttatattgctgctgctgctgctgctgctaaagaCTTTTCACACAAGGACTGTCATCACACAAGGACTGTCATCACACAAAGACTGTCATCACATGAGGAGTGTCATACACAGGAATCAGGAAGGCCGAGCGCTGGAGGAAAAAGTgattgtgcgtgcgtgcgtgcgtgcgtgcgtgcgtgtgtgtgtgcatgcatgcgtgcgtgcgtgtgcgtgcat

Function

symbol description
fam155a Predicted to contribute to stretch-activated, cation-selective, calcium channel activity. Predicted to be involved in calcium ion import across plasma membrane. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human NALF1 (NALCN channel auxiliary factor 1).

NR:

description
PREDICTED: transmembrane protein FAM155A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817230.1 True 5319 mRNA 0.44 3 20026079 20118310

Neighbor

gene id symbol gene type direction distance location
pdzk1 NA coding downstream 67215 19953230 ~ 19958864 (-)
zgc:113337 cd200,LOC103369899 coding downstream 82169 19934150 ~ 19943910 (-)
cfap91 NA coding downstream 112359 19908494 ~ 19913720 (-)
nr1i2 nr1i2 coding downstream 119002 19900242 ~ 19907077 (-)
LOC120569249 NA coding downstream 252048 19771293 ~ 19774031 (-)
irs2b LOC104955106,LOC103372228 coding upstream 180771 20299081 ~ 20316292 (-)
col4a1 col4a1 coding upstream 222976 20341286 ~ 20389402 (-)
rab20 rab20 coding upstream 353297 20471607 ~ 20476349 (-)
ube2al ube2al,ube2a,LOC105934920,LOC104955100,LOC103021436,LOC103029486,LOC108259060,LOC107552373 coding upstream 373856 20492166 ~ 20498871 (-)
ankrd10b ankrd10,LOC102292027 coding upstream 381143 20499453 ~ 20515203 (-)
G125524 NA non-coding downstream 32758 19991408 ~ 19993321 (-)
G125460 NA non-coding downstream 126905 19898684 ~ 19899174 (-)
G125459 NA non-coding downstream 127697 19898002 ~ 19898382 (-)
G125458 NA non-coding downstream 128149 19897667 ~ 19897930 (-)
G125434 fstl1 non-coding downstream 165842 19817239 ~ 19860237 (-)
G125539 NA non-coding upstream 25273 20143583 ~ 20144749 (-)
G125543 NA non-coding upstream 29106 20147416 ~ 20149179 (-)
G125551 NA non-coding upstream 111775 20230085 ~ 20232060 (-)
G125605 NA non-coding upstream 212198 20330508 ~ 20330715 (-)
G125658 NA non-coding upstream 466338 20584648 ~ 20584932 (-)
si:ch211-214p13.7 NA other downstream 102344 19921268 ~ 19923735 (-)
LOC120570223 NA other downstream 229859 19790052 ~ 19796220 (-)
si:ch211-214p13.3 NA other downstream 257493 19751701 ~ 19768586 (-)
G125326 dopey2 other downstream 428558 19595929 ~ 19597521 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other downstream 767233 19231987 ~ 19258846 (-)
G125619 col4a2 other upstream 340852 20459162 ~ 20461629 (-)
G125620 col4a2 other upstream 345799 20464109 ~ 20467185 (-)
LOC120570047 dynlt3 other upstream 616240 20734550 ~ 20738320 (-)
G125842 NA other upstream 835351 20953661 ~ 20960064 (-)
LOC120569741 LOC104951940,LOC103391685,LOC103352881 other upstream 860691 20979001 ~ 20986633 (-)

Expression


Co-expression Network