cxcr2


Basic Information

Item Value
gene id cxcr2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 8088571 ~ 8092226 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817236.1
CACACACGTTACAACAGGTCTGAAAGTAAAGACAACACTTCTTGCCAAACATCTTTATTCTTGTTAACCTGGGTGCAACAAGAAAGGAGGGATGAAGCTACAACTTTTGATcgtttgtgtttttaagtatTTGGTTCAAACCAATCAACAAGATGGGGAAAAACAGCTGACAACAGAGGGAGTTACCCTTGATGTAAGTTACTGGAATTCCATTTACAATTCTTCTTATTATGAAGATGAACCATCTGCTCCTTGCAGTGTAACTCCGCCTGGATTTAATAGCTTGGGCCTGATGATCACCTTCATGGTCGTGTTTGTCCTCAGCCTGTTGGGCAACAGTGTAGTTGTCTATGTGGTGTGTTCTATGAAGAAAGGTAGAGCCAGCACAGATATCTACTTGATGCACCTGGCGATGGCAGACCTTCTCTTCTGTCTTACCCTCCCGTTCTGGGCCGTCAATGCTCACTTTGGTTGGATCTTTGGCAACTTCCTGTGCAAACTCCTGTCGGGCTTCCAGGAGGCATCGGTATACAGTGGTGTCTTCTTGCTGGTGTGCATCAGTGTTGACCGCCACTTTGCCATTGTGAGAGCTACACGTGTCCTGACCTCCCATCACCTGTTGGTGAAAGTGGTGTGCGGTATGGTGTGGCTGGTGGCCGGAGTGCTGTGCTTACCCGTGGCGATTCAAAGGGAGAGCCTGCATGCTGAAGACCTGGGCCAAACCATTTGCTATGAAAACCTAACCGGTGAAAGCAGTGACCACTGGCGTGTTGGCCTGCGTGTCATGCGCcacattttgggctttttcctgCCACTGGTGGTGATGGCTGTCTGCTACGGCTGGATCTTGGTGACGCTGTTCAACGCACGCAATCGACAAAAGCAAAAGGTCATACGCGTCATCATGGCAGTGGTGTCAGCATTCGTTCTTTGCTGGCTGCCTTATAACATCACTGTCCTGATTGACACACTCATACGAGGCGGAACACTTCCAATGGAGACATGTGAAACTCGCTATACAGTGGAAATGGTGCTAAATGTGACCCAAGTGTTGGCCTTCATGCACTGTGCAGTGAATCCAGTGCTGTACGCCTTCATTGGGGAGAAGTTCCGTAACCAGCTGCTCTTAGCTCTGTACAAACACGGGATCATCAGCAAGAAGCTCCTGGTGGCTCACAGGAAGGGATCAGTCAACAGTGCAGGGAGCATTAAATCTAGAATCACCTCTGCTAGCATgtaaaaaacccccaaaaaacagGGGTTAACAGCTAACCTTGCTCTGTATTTTTTggaaccaggctagctgtttccccctgttttcagtctttagcTATGCTACTGGCAGCTGGCTGTAGCCTTATGTTGAATAGACAGGCATTCACGAATAACTCTCTGCAAAGAAAGTGAACAAGcttatttcccaaaaatgtcgaaatatttctttaaatcatGTCATCCCCAAATTCTGAACAAATATTACTAAGGACGTGCATGGTTCACATGTATGGTACTAAAGTTAAAATGGTATAGTCAAAACTTCAGCAGGATGTCTGCTTTAGGATCCTGTCACGACCCAGATGTGTCCCCTATAGCCTCAGAGAGcatttgcaacaacaacaaaaaatcttGCCTTAATGTCTTTTGATGCTAAGTGATTTCACCTCGTTTGAAGGGTAATTATTGAGCATAACAATTTTGGACTCAAGATCCTCAAAACAACctcaaaaatataaatcagaTGTGAAGCTATCAAAATAGTGAATGAGAAAGACGTGCAGCTATTGATACTTTGATCATGTGCCATCCTTTGTAACTTTGAGAACTGGTGCAATTATTGaaattgtttgtgtatgttgtacaaagcttgtgtgttttttcttggTAAGACAGTCCTTTATGTCTTTTAATAATGtcatttttcttgtgtttttgattGTGAGACACGGATGTGACTGGAGAGCCATCTTCTTATTTTGCAGTCTTTTCATAGAAACACTGtgaacctgttttttttttttttgtccctacTCCAGACATTAgtagaaacatttttttatcgTAATCAGAGATATCAAACTTTCAAACAGGAAGATGTGATGAAATCAGCTTTCTGTTTTCAAAAACAAgtgctgtctgtctctttgaTGAATGCTTTTCATTTGGCCACATCTCTAGGGTCTGTACAAACTGCATGTGCaggaaacatactgtataacatTGTTCTTTGTAATCAATGCTATCATCTTAAAATGCTCAAGGTCTAGCAACTGTTTTCTAGATATGCTTTATCTGTTTATCGGAATCAGCACCTTGTATGTGCAGGTAGTACGTGTggatatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcgcgcgtgtgtgcaaACGCATTTGCATACCTGTGTGGGGAGCTCTGTGGCTGATATAAAGAAACAAAAGGGAGAAAGTGTCTTCATGAGAACTTGTGCAGCTGCCATACATGGAAAACAAATTACATGTAGGGGTTAGAATGATCATTGTCTAATCATATGAATTATTATGGTATTATCCTATTATTCTCTGTTGTTTCTGCAAAACTCATTACACTCTTCTGAACGATTTCTAATAGTTctgtttggtttttttaaagttttttttaaaatgcattttctaaCATATATAACCCAACATGTATGTGTAGTGTAATTACAAATTCCCATTTAGCTAATATACAGTATTGAGCTTTTATGAGAAAATGGCTTAATAGTGCAAAAGTACACAAATAGTGTAGTGCAAATAAGCAAATGAAATGTATACTTGAGTTAAAATAAACCATTAAA

Function

NR:

description
PREDICTED: C-X-C chemokine receptor type 1-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0006935 chemotaxis biological_process
GO:0070098 chemokine-mediated signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016494 C-X-C chemokine receptor activity molecular_function

KEGG:

id description
K04175 CXCR1, IL8RA, CD181; C-X-C chemokine receptor type 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817236.1 True 2826 mRNA 0.41 2 8088571 8092226

Neighbor

gene id symbol gene type direction distance location
faima faim,LOC104925879,LOC101481285,LOC102793570 coding downstream 3735 8077912 ~ 8084836 (-)
parp14rs1 NA coding downstream 17894 8054315 ~ 8070677 (-)
esyt3 NA coding downstream 35407 8031688 ~ 8053164 (-)
dnah7 dnah7 coding downstream 57922 7933178 ~ 8030649 (-)
trnas-aga_9 NA coding downstream 909413 7179077 ~ 7179158 (-)
LOC120569509 lct coding upstream 38590 8130816 ~ 8142482 (-)
twist2 twist2,LOC103376110 coding upstream 234800 8327026 ~ 8330482 (-)
LOC120570227 LOC104955246 coding upstream 249077 8341303 ~ 8344352 (-)
asb1 asb1,LOC102790951 coding upstream 295047 8387273 ~ 8397525 (-)
adarb1b adarb1,LOC101485294,LOC102308976,LOC100709054 coding upstream 349892 8442118 ~ 8582576 (-)
G122677 NA non-coding downstream 175253 7828932 ~ 7913318 (-)
G122660 NA non-coding downstream 464528 7623422 ~ 7624043 (-)
G122656 NA non-coding downstream 523141 7565214 ~ 7565430 (-)
G122644 NA non-coding downstream 951843 7136478 ~ 7136728 (-)
LOC120569626 NA non-coding downstream 1053294 7014183 ~ 7035277 (-)
G122802 NA non-coding upstream 99698 8191924 ~ 8192187 (-)
G122814 NA non-coding upstream 221796 8314022 ~ 8316726 (-)
G122820 NA non-coding upstream 289660 8381886 ~ 8382121 (-)
G122828 NA non-coding upstream 419844 8512070 ~ 8611863 (-)
G122830 NA non-coding upstream 512300 8604526 ~ 8612694 (-)
tmeff2a tmeff2 other downstream 770939 7181931 ~ 7317632 (-)
pcbp3 pcbp3,LOC100710924,LOC107660579,LOC103138153 other downstream 1217359 6782446 ~ 6871212 (-)
LOC120569614 NA other downstream 1406577 6640881 ~ 6681994 (-)
G122404 NA other downstream 2074376 6012040 ~ 6014195 (-)
glsb gls,LOC100711430,LOC102197968,LOC101482051 other downstream 3115960 4917659 ~ 4972611 (-)
traf3ip1 traf3ip1 other upstream 307359 8399585 ~ 8448430 (-)
ccnt2a ccnt2,ccnt2a,LOC104923135,LOC102200362 other upstream 701395 8793621 ~ 8803104 (-)
G122878 NA other upstream 907236 8999462 ~ 9000123 (-)
stxbp5l stxbp5l other upstream 2847827 10940053 ~ 11094619 (-)
thsd7ba NA other upstream 3188384 11280610 ~ 11467939 (-)

Expression


Co-expression Network