LOC120569518 (LOC101478235,LOC102203487,LOC102783581,LOC104922687,LOC104947508)


Basic Information

Item Value
gene id LOC120569518
gene name LOC101478235,LOC102203487,LOC102783581,LOC104922687,LOC104947508
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 18599472 ~ 18601382 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817379.1
AAATTGACCCCATGCTTGTACAAAGTAGTTTCCATGTGTATTGTACCAACACATTACCAAATCAGCCATCGTAAAACAGAGAGTGTCAATTCAAGGCAAAACGTGATGGTTTGTGATGTATACAAACTGCTCGGCCTCTTGTGTGTGCTTATGGCATAACCGGAAACACGACACAGGTGCCCCGCAGTTTGTGTTGAGAAGCTGTTGTGCCATTGCTTGAATTTGCCTTTGTCTGTCTAGAGGCTCAACTTCCACGCAAGCATGAGTTACAGGACTGTGGTGATGTACATGGAGATCGGCTGCtttgttgtctgtgtttctggATGGATCCTGGTGTGTTCCACAATGCCCACAGATATCTGGACATGGTCTGAGATAGAAACCAGAGTCTTGACTACTTCACACTACTTCTCCAACCTGTGGAAGGATTGTATAGCTGATTCAACTGGAGTAACTGACTGCAAGGACATTCCATCACTGCTTGCACTGAATTGGGACATTCACATGTGCCGCGCTCTCATCATCATCTCTATTATCTTGGCTTTCTTTGGATCAGTTCTGGTCTTAGTGGGAATGAAGTGTACTAAGATTGGGGGATCAGAGGTTGTTAATGCAAGACTAACCTTTGCTGGGGGAATGAACTACTTTATCGGAGGAATGTGTTCTATGATTGCTTTCTCCTATTATGGAAACAAACTTAGAGCAGAATTTCAAGACCCTAACTACAAAACTGAGAAGTTTGAAATAGGCGTTGGTGTCTTTATCGGCTGGGGAGGCTCCGCCTTACTTGTTGTTGGAGGCCTCATTTACAGTCTCTTTGCAGGGAGGGAAGGGTTCCACTCAAGCTCAAAAAGATTCCCTGAATACCAGTTCCCTGATGCCTACAGAGTTGTTCCGACAAAAAAGAGCATTCCGTTTTTGGCTCATACAGAGATTAGTGAGAGCAGAAAACCAAGGACCACCAGTGGCAGCAGAGGCAGCAGCATCTCTGGGATCACAACCACCACCAATTCGTCAGCTATAAATGCATATGTATGACTTGTTTTCAAAGGTGGAAAAtattctgtctttctgtccttCCAGAAATCCAAGATATTTTATAATCTAAGCCCATACTTGAGCTTTAACATTAGCCTTTAGAATGGGTCTTAtttccacagcagacatttagcattaacaatggctctgttCAAGTGTCCCAAAACATGTCTATTAATTATCATGATGTTTGGCTGTTGTTGTAGCCATGCATATGTTTTAATAGTAATGTAGATAAAACTATGTATATTTGAAACATGGACAAAGAAGTAACTAATAATACCAGGACTTAATGTTGACTTACTGTAACATGTATGCTACGCATCTCTAGATTGCTTGTTTAAACCTGACTGAAGGTTGCATGCTTTAATATTGCCTAACACTGCTGTTGATTGATGTTGTCAGTTGTTTTTGAAATttgcaataaaacaaaatgttgaaaggA

Function

NR:

description
claudin-10

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0005923 bicellular tight junction cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005198 structural molecule activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817379.1 True 1483 mRNA 0.41 5 18599472 18601382

Neighbor

gene id symbol gene type direction distance location
dnajc3a dnajc3 coding downstream 1017 18581236 ~ 18598455 (-)
hs6st3b hs6st3,LOC101476457 coding downstream 64034 18466925 ~ 18535438 (-)
LOC120569776 mbnl2,LOC104947512,LOC102785098,LOC101474989,LOC104922684,LOC107389970,LOC102200241 coding downstream 140355 18442534 ~ 18459117 (-)
LOC120570503 rap2a,LOC106512668,LOC101166017,LOC103391592,LOC106582448,LOC105907999,LOC105933629,LOC103043765,LOC100332969 coding downstream 158100 18428988 ~ 18441372 (-)
LOC120569851 farp1,LOC100690924,LOC102786545,LOC102302212,LOC101473631,LOC102199780 coding downstream 180222 18352353 ~ 18419250 (-)
LOC120570204 NA coding upstream 1741 18603123 ~ 18605171 (-)
LOC120570238 cldn10,LOC103391834,LOC104947506 coding upstream 5044 18606426 ~ 18608814 (-)
gpc6b gpc6,LOC104947503 coding upstream 103306 18704688 ~ 18789294 (-)
slitrk5b slitrk5,LOC100690770 coding upstream 247907 18849289 ~ 18852790 (-)
LOC120569248 LOC102780588,LOC100690496,LOC101481378,LOC102206814,LOC103352953 coding upstream 271681 18873063 ~ 18885787 (-)
LOC120569840 NA non-coding downstream 387516 18208738 ~ 18211956 (-)
G125000 NA non-coding downstream 506942 18092327 ~ 18092530 (-)
G124872 NA non-coding downstream 575995 18022409 ~ 18023477 (-)
LOC120569506 NA non-coding downstream 776985 17737284 ~ 17822487 (-)
G124691 NA non-coding downstream 1248726 17347911 ~ 17350746 (-)
LOC120570508 NA non-coding upstream 214464 18815846 ~ 18819321 (-)
G125108 NA non-coding upstream 226160 18827542 ~ 18828502 (-)
G125112 NA non-coding upstream 242718 18844100 ~ 18844338 (-)
G125113 NA non-coding upstream 243164 18844546 ~ 18845295 (-)
G125116 NA non-coding upstream 244450 18845832 ~ 18847369 (-)
prkra prkra other downstream 435723 18156732 ~ 18163749 (-)
LOC120569287 LOC103391581,LOC104924425,LOC103375901 other downstream 484375 18113110 ~ 18115097 (-)
fastkd1 fastkd1,LOC102780871 other downstream 1557100 17035373 ~ 17042372 (-)
LOC120570068 LOC103362129,LOC101485094 other downstream 2209578 16381250 ~ 16389894 (-)
gcgb gcg other downstream 2218707 16378488 ~ 16380765 (-)
G125089 dct,LOC102781940 other upstream 94098 18695480 ~ 18699802 (-)
G125090 NA other upstream 99505 18700887 ~ 18704677 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other upstream 630605 19231987 ~ 19258846 (-)
G125326 dopey2 other upstream 994547 19595929 ~ 19597521 (-)
si:ch211-214p13.3 NA other upstream 1150319 19751701 ~ 19768586 (-)

Expression


Co-expression Network