LOC120569522 (LOC104941720)


Basic Information

Item Value
gene id LOC120569522
gene name LOC104941720
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 27964421 ~ 28011644 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817381.1
aaaggaaaactcaAGTGACTCTGAATGATAATAATAAGGCTGCGTTGTTTATCCAAAGAAGGGGGTTGGACTTCTGCTCAATTCGCCAAACTCTTCTAAATTTCCATTTTCTTCCCCTCTCACAAAACTTCACCACTTTTGTGTTCACACGACTGCCTCAATCTCACTTCCACCGCACCGCCGACCAAGGTCAGAGTCAGTGACCGCCCACTGGAACTGGCAACGCGGCACCGAACCTCTGCGGACCCCGGCggcagctttttgtttttcttgggaGTTGGACTCACTGGCCGAATAAACGACGGAGTAACAGACTGTGACCTGTACGTATGGAGGAAGCCTCAACAACGAAGGAGTAGCTAAATAAGCCCAAACAAACGTTTGTGAAGTTATACGAAGTGACACCATGTTGGGAAACCCAGGATCTTATGCTaacaagaagaggaagaagcctGTTCTCAAACATAAGAAGGTCTCGTCGGACGGCAATGAAGTCGTTAAATCAAACCCTTCCAAGCGCCACCGGGATCGGCTGAACGGGGAACTGGACCGGCTGACGGACCTTCTGCCCTTTGAAGGGGAGGTTCGCACTCGTTTGGACAAGCTGTCGGTCCTTCGCCTCAGCGTGGGTTACCTGAGAGTCAAGAGCTACTTTAAAGCGACCATGaagaacagcagcagcagtctgaTGTTCTCTGGAGTGAACGGGCAGAATGGGAACAACGCGGACACCGCAGGCTTCTCTGAGGGCGACCTACTGCTCCAGGCGTTGAACGGGTTTGCGATGGTGGTCACGTCAGAAGGATCGGTGTTCTACGTCTCTTCCACCATCAAGGACTACCTGGGCTTTCATCAGTCGGATGTGGTTCATCAGAGTGTGTTTGAGCTCATCCACACTGATGACCGGGCCGTGTTCAGACAGCAGCTTCACTTTGCTCTAAACCCCCCATCTGTTGGCACGGATGTAGATGTGTTGAAGAGTTGTGGTAGTACGGTGATGTACAACCCTGAGCAGCTTCCCCCAGAGAACTCGTCCTTCCTGGAGAGGAGCTTTGTGTGTCGCTTCCGCTGCCTCCTGGACAACTCCTCTGGCTTTCTGgCTCTGAAGTTCCAGGGGCGACTGAAGTACCTCCATGGCCAGAGGGTTTTGAACGGGGACTGTAACAAATCTCAGCTGGCACTCTTCGCCATTGCTATGCCCGTCCAGGCTCCAACCATTGTGGAGATCCGAGCTAAAATGCTCCTCTATCAAACCAAGCACCAGCTGGACTTCACACCCATGGCCGTTGATAGCAGGGGAAAGATTATCCTGGGCTATTCAGAGACTGAACTGTGTACGAAAGGCTCCGGCTACCAATTCATCCACGCAGCCGACATGATGTACTGTGCCGACAACCACTTGCGCATGATGAAAACAGGAGAGAGCGGTCTGACGGTTTTCAGGCTCCTGAGTAAGTCGCGTGGCTGGGTGTGGGTGAAGTCCAACGCCAAGCTGATCTACAAAGGAGGAAGACCTGAATTCATCATCGCATATCAGAGAGCTTTATCCAACGCTGAGGGCGAGGAATATCTGCATCAGAGGAGGCTGCAGCTTCCCTTCAGCTTCACCGCAGGAGAGGGCATCCTCTACAACAACGACGCCACCGTGGACGTTGAACAGTTTCAGTTCAACAAAATGTTCAGCGACGTTAACAAAGTGAAGGAGGACGTGACCCCCCGCTCTTTGCTGGACTGCTTCCTGAGTCAGGATGAAACCGCCTACATGCCGCGGACGGTGGACACCCCTCTACCCATGGACCAGGTGTTCATGGACAGCCAGGCGCTGGTCAGCATCGCCAGTGACTCGTGGCAGGATGACGGCACCACGGCCACAACCAGCGAGCCCGTCGTCGTGAAAGAGGAAGCCAAGCAGTCGGTGATGGCTGTGATCGACAACCTGGAACAAATGGCTCAAAACGGGGACTTCTGCGCAGCGTTGGAGAACCTGGAGGTCGGTGACGCAGAGCTGATGGAGTGGAATAATGCCCTCAAGAGATTAAGCCAGGACCAGGATCAGCAGAGCAACGTCAGGTCCGAGCTGGACAGCATCCTCACGAATGACATATTTGACTACATCGACACGGTTTTGTTCAAGGAGAAGGGAGAAGATTGTCTAAAAGGCGGCCCTCCCAGCTGCCTCACGGCGGTCCACAACAATCAGCAGGACCCCACCGCTCAGGCTGCCCGGCTCTCAGCCGCTGGACTCGGTGACCCACAGCTGTTCCAGACCCCGAGCCCCGATCGTGTTTACTCCCCAATGAATGGTCTCTATGCCCACCAGCAGGACGCAATGACTGGCCCAGCGATCGCAGGGCGTAGCTTAGTAGAGCCCACGCAGATATTCAGCGGCGCCCAAAAACTCTCCCACCACGGTCCCCTGATCACTCCGGTTGACACCAACCTGCCCCCTCTTCAACAGCTGCAGCTCCAGGACATTTTCAGCCCGTCCATAGAGCTTCCAGAGCTCACCGTCCCTGACGCCTCGGGCCCTTTTCAATCCTGTGGGCAGGCGTCTATCAGCCACATGGGCCGCCCTCAGGGGACTTCAGCACAGACGCAGTCCAACCGGCTTCTGCAGTGTCTTCAAAACAATGCGCACGCTCCTGCAGTAGCAGCGAATGGACCGCTGCTGCAAAGCTCCGTTCCACAACCAAACAACGTAGCGCCCGGCATAATAGACATGTTGCCAGCCCTGATTCCGTGCAGTGACTTTAATTCGGCCAGCACGCCTAATATTCCCATTCCCTTTGCCTCAACATGTCTGCAAGGAAGCCCCTCTTTTGAAACGCACAACCACCAGGTTCAGCAGTGGCCGCAGAGCCACATGCAGAAGCTGCCCCACACTGGCATCGTGCAGAACGGACACAAGCTGATGCCAGCGTGCCACAGCCTAACGCCAGAAAGCCAGACGTTCCCACATGCCGCCGGCCTTTGGCCAAGGGACGTCAGCGGACTGAACGCCACTCAGCAGCACGCAGGGCTGATGTGTGGCCAGGCAGCCACTCACAGCAGCTGCATGTTCAACCAGCACTTTTCATCCGGGCCAGCAGGAGGCGACGTCCTGGCTCTGTCCGGGCCTCCAGGCCCCCTGAGGGGGGCTGACGCGTCTCTGGATCAGAGTCCTTCTCAAGGTTCCTGCTACTTCCAGTGGAGCCACAGTGAGCACGTGGTGGGCACGTCAGCCATCAACCAGGAGAACGTCAACATCAGCCCTCTGACCGCTCCGGCCAACATGCCCGCTACAGAGCACGCACTCAACATTCAGAACTACCTGGAAtaccaaagacacacacagGGGGAACGAGTCTCCGCTGAAAGCAACAGGATTTTCGACGCTCCTGCTCTCGATGTCTCCACTGTGTAGCCGACAGTGGAGCCAAGCCACGTTGTTATTTCTGTCGCGACACGTCCAGGAGGCCAAAACTCAGTATAGTTTGCCTGTATCAGTGCTTATCCACAGACTCTCATGTCTACCCTCGTCGTCATAACTTTTTTTATCTCCGTATCATTTATACTTTGTCCAGTCTGTAATGTTTTAGAATCTGCTGCTTTGTGAGTTTTTAGTGAAGATACACTATAGTAATAATGAAGTATGAAGCCACAAGTGCATTTACCAGGATGGAGCTTAAGCCAGCTAGGAGGATTGGTCAAGTAAATCCAAATAGCCCAAGAAACAGGTTGTTATAAGGGAAAGCAGGTTTTAGTCACGTCCTTGTTTTCAGCCAGGGACAGCGTGTATTTATCTCCCAAGTAAAAATACCTGaaaatgggggggaaaaaaacgaacattttaaatataatcATTCTAAACTTTGATGCTTACAAAGTGGAGACTTTTTCTAAGAGAAGTTGTGATCATCTTTATAAATATCAGTGTAAAGACTCACTGAAAGTGAAAGCTACCTGAAAGCACAGCTGTACCTTGAAATTAATACTATTACAGATAAATAAATCTGTAGATTTTAAATGGACCCCTTAAATGTGGTTGATGTAAAGTGTGTAAATACACGCTGTAGTTGTACTCGTATTTGTTTCACCAAAAGGTTGGCTTTGGCTCACAAAAGTCTCCTATGTACAGATTATGCCTCAGCATGTAATCCACGTGTGCAGCGTAAACGCATTTTTATGGAGAATGCTTTCCGGTCGGAGATGCAGAGATATCTCAAATCCCAACAGTAAacggatatatatatatatatatatatataatcaggaAAAATGTTTTGCAAACTTCTGTCAGGGATGCAAACATTTTGGTTTGTCACATTATTTCTATTTCAGTGACATTTTTAAAACTAGAAGCATAGCTGCAGTTGGGTTAATGTGAATGCACCGCTGCTAATTAAGACCTGTACttgtgctgttgtttttttagatgcACCTTActcatgtctaaaaaaaaaaaaactaaaaaaaaagcaatggaACTAAAGGTAAACTGCAAGTGTGCCACTGAGCTTTCAGAAATCACTCCATCAAAAATCTCTTCAAGCTCGTCAAACGTACCGCGCCACATTCCCCAAAACTGTAATTATGCGCTCACTCGTCCAAACAAAATGCTCAGTGATTGCAAGAAAGAAAGTCAAATAACTAGCATGAGTTACAGTCAAagagtgttaaaaaaaagaaaagaaaaaaaggttacaGTAGAAGCCTAAATGATCTCCCAATATTCTATGTCAAACCAAAAACGGATGTACTTTTAGGGAAAGCTTATTCTTTCTCAAAAATGCTCAACCACACTGACAAAAGGGCCAACTCCTCAGAATGTGTCTCCACACTAGACACGGGGCCCCCCCCCTCTAGATGAGACATTTAACAATACTAATGCTGCATTTAGGTGCGCTTTATCAACTTTTAAGTTAAAAACATTCACATCTACCATTCACTGCAAACCTGCCCTAAGATGGATACCAAAATGATGAAAGCCAGTGTTAATTAAATGAGCACGTGATGGACAACTATTAAGCAATGTACAGTATCGGTTTAAGATAATATATCGCTACAACTTGTGAATTCTTCTTACATTTATTCACATCTTTCAAAGATGTgaataaatgtaatgtctttTACTAATCTTCTACCACCACCACAATGGAAAGACTTGATAAATACAACATGGAATCAACTGACTTCACAAGTTATTGCCTGAATCCACTTTTAAACAAATGGTTGATGGACTTCTTCAAGCCTTTAAAAAGAGTCAGCCCTGTCAACCTGTTGTAAtgttctaaaaaataaaaaaaataaaaagctaacTTGAAAGGATGCAGTCCCTAAATTTGGACACAGGTGATCCTCCCTACCTTCAACTCTGTCCTCACCCATATAGACTTCTGTTCAATTCTCCTATATATTGTTATACAAAATAGAAACaccctaaaatatatatattgcctTAACCAAACATTCATTTATATGATCGCATACAGCATGGTCATATACATTTTCGTGTGCCTTCATGCTGAATCGGCAGCTTAAAAGTATCTTCATATAAATATATCCGTGCCTTCATGTATAAAAGCAtcttaaaattatattttacgCTTGTAgcgcttgttttttttttttgcaattctTAAGAGCTGCACTAATTTGAGTGAAGCCATGTCCATAGGAGATGCAGTATCCTTACTGTAAATTTAAATTTGTATCCTTAAGTGTGCTTAAATGCTCTGAGGACTTTCTTAAAGTCTATTTTCCATTACACAAACGTCCTTAACAATAGAAACAAGGGAAACACGCTTAACTCAACCTATCTCCATAGAGATGGTAAGAGTTCTTTCGTTGATAAGCAAGCAAGTATTTAGTACCAAGAATGAGAAGTTTAAACTGGTCTAACAATGCATTCAGATCATATTTACTTTGCTTTGTCGATTTCCTGTTTGTGCTCTTCATGTtggctctttttttatttatttttttatctgctTTTCACTAAAGGTTTGTTTTATCcacactacaaaaaaaaaacacgcaaaaaaaaaaaacagcattattGGTTTGGATTAGCTTTTACATGGCAGCTTCACCGTATTCTTGCTGCACTGTGGGAAATCACTCAGTATTTTACCTCTCCCTAGCAATCtattgtgtatgtttttggAAATAGCTTTTTAGTACAACGCCTAAAGTTAGGGCACAGATTAACACGGCTTCCTTTCCTGTGTCCTTTTTCGCTCATTGTTCTttattgtgtttaaaaaaatatatatacataaaaaaaaaaaaaagctgtcatGGACTCTTGCGGCTGTAGAGGATCTCAGCGTGAAGCTTTAAGGACAGCCAATAAACGGCCTTTTGATATTGAACTTTGATACGGACACGTCATGACTGTAGCcactatgaaaaaaaaaaaaaatacctggagCCAAATGTTTTATTCACAGTGGTGTTGATGTTTTTATGCTAACATGTGCCTTGcaatatttgttatttgttaaaaaaaaacaaaaaaa

Function

NR:

description
PREDICTED: aryl hydrocarbon receptor-like

GO:

id name namespace
GO:0006351 transcription, DNA-templated biological_process
GO:0050794 regulation of cellular process biological_process
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817381.1 True 6500 mRNA 0.46 11 27964421 28011644

Neighbor

gene id symbol gene type direction distance location
LOC120570327 cntnap5 coding upstream 53694 27804925 ~ 27910727 (+)
LOC120569540 LOC100689803 coding upstream 376832 27581078 ~ 27587589 (+)
gdap2 gdap2 coding upstream 845071 27088995 ~ 27119350 (+)
tbx15 tbx15 coding upstream 1056904 26867195 ~ 26907517 (+)
wars2 wars2,LOC102792775 coding upstream 1104418 26831993 ~ 26860003 (+)
LOC120569523 LOC104941714,LOC104924856,LOC103373286 coding downstream 14891 28026535 ~ 28078578 (+)
kalrna kalrn coding downstream 80794 28092438 ~ 28282323 (+)
abcb6b LOC101063776,LOC107092899 coding downstream 278343 28289987 ~ 28339721 (+)
ttll4 ttll4 coding downstream 350488 28362132 ~ 28382307 (+)
fer1l6 NA coding downstream 402994 28414638 ~ 28449950 (+)
G127570 NA non-coding upstream 20799 27938694 ~ 27943622 (+)
G127542 NA non-coding upstream 313638 27650396 ~ 27650783 (+)
G127541 NA non-coding upstream 337801 27626408 ~ 27626620 (+)
G127538 NA non-coding upstream 373203 27590977 ~ 27591218 (+)
G127498 NA non-coding upstream 435933 27431551 ~ 27528488 (+)
G127613 NA non-coding downstream 216452 28228096 ~ 28228450 (+)
G127623 NA non-coding downstream 331848 28343492 ~ 28343798 (+)
G127665 NA non-coding downstream 373773 28385417 ~ 28385642 (+)
G127701 NA non-coding downstream 522299 28533943 ~ 28534172 (+)
LOC120570261 NA non-coding downstream 700787 28712431 ~ 28713525 (+)
LOC120569906 NA other upstream 1247024 26713350 ~ 26717397 (+)
zmym2 zmym2 other upstream 1480333 26449443 ~ 26484088 (+)
mphosph8 mphosph8 other upstream 1525136 26411477 ~ 26439285 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other upstream 1834542 26116988 ~ 26129879 (+)
cacnb4a cacnb4 other upstream 2299994 25630107 ~ 25664427 (+)
prkag3b prkag3,LOC103374929,LOC105937223,LOC107101406 other downstream 376999 28388643 ~ 28409839 (+)
G127814 itgb5 other downstream 1017258 29028902 ~ 29041224 (+)
LOC120569952 LOC103367759,LOC104957842,LOC103482036,LOC106947595,LOC102235455,LOC102799479,LOC101465930,LOC102199775 other downstream 1284840 29296484 ~ 29299361 (+)
G127932 LOC103367765,LOC102202048,LOC100700231 other downstream 1447500 29459144 ~ 29459978 (+)
G127935 LOC103149918,LOC106933234,LOC104960782,LOC104932527,LOC108238793,LOC103482149,LOC105920790 other downstream 1455500 29467144 ~ 29474550 (+)

Expression


Co-expression Network