osgepl1 (osgepl1)


Basic Information

Item Value
gene id osgepl1
gene name osgepl1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 4986399 ~ 4991501 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817443.1
GTCCCAAACGTGCCGGTGCACGGAATTATTTACATGTGACGCAGCAGCCACACGGCTAGAGCGAAAGAGAGAATACTAATGCATCTGAGTACACTAACTTTCTGCTCGTAACTCCACGTACTCcgtgtattttctgtttttggttCGTTGCCCGGGGAACTAATGTGATGCCGTTCCCATATTCGTCTCAGCTATCTTAATTTAAGAGTTTAGAATTCAATAGGAAATGAGGCGAGGTCACCCCCAGTTCCTAGACTATTTAAAACTCACAGTTGGCTAGTATTGGAGTCATGGCCATGTTCCctacaaaagtaaaaattctgcACAGGCTGCTACAGTCTAGACACCCATTTTGGTCCTGTCCCTCACTTGGAGGAGCACCTTGCTCCAGACTGGTTCTGGGCATTGAGACGAGCTGTGATGACACTGGAGCTGCTGTGCTGGACGAGACGGGTGAAATACTGGGAGAGTCTCTACATTCACAGAAAGAAGTTCATCTGAGGAGTGGTGGCATCATCCCCACAGTGGCACGACAGCTCCACAGAGAAAACATAGAGCGTGTGGTCCAGGAGGCTTTGGAGAGGAGCGACACGGACCCGAGCCGGCTCTCGGCCGTGGCCACCACCGTGAAGCCCGGCTTGGGCCTGAGCTTGGGCGTCGGTCTTGAGTTCAGTCAGAGGTTTGTGAGGCAGCACAACTTGCCCTTCATCCCCATCCACCACATGGAAGCCCACGCCCTGACCGTCAGGATGCTTCAACCGGTCGCCTTCCCCTTCCTGGTCCTGCTCGTTTCCGGTGGTCACTCGCTTCTCGCCGTGGCTCGAGGAGTCGACGACTTTCTGCTCCTGGGTCACACTCTGGATGAAGCTCCAGGGGATACACTGGATAAAGTGGCAAGACGTTTGTCGCTCATAAAACACCCACAGTGTTCCACGCTAAGCGGAGGACAAGCTATAGAGCTTCTAGCGAAGGATGGCGACAGGATGAGGTTCCCTTTCAGGACACCTATGGGACAAACGTACGACTGCTGCTTTTCTTTCGCTGGGCTACGGAATCAAGTGAACATGTTGATAATGAAAAAAGAAGCCGAGGAAGGTATCGAACAGGGGACGCTGTTATCATGCGTGAATGACATTGCAGCTGCCGCACAGCACACAGTGGCCTCTCATCTTGCAAAGCGCACACACCGAGCCATCTTGTTCTCCAAGGCCATCGGCCTGCTGCCATCGAGCAGTCCCACCTTGGTGCTGTCTGGAGGCGTCGCGAGCAATCAGTACATCCGCAAGGCTCTAACTCTCATCACTGACGCGACGGGACTACGCCTGCTCTGTCCTCCAGCCAAATTCTGCACTGACAACGGAGTGATGATTGCATGgaaCGGTGTTGAGCGCCTGAGAGAAGGGAAAGGGATACTGCCTCCAGATGTGGATGTCAGCTATGAGCCAAAGGCCCAGCTGGGTGTTGACATGACGGCGGAGGTGAAGGCAGCAGCGATCAGGTTGCCCTCAGTCCGGATGAAGATCCCCAACTGACACACTGTTGGTTTTGTTCTgcgcagaaaaaaagtgttttgtcaCTCCTATATTTTCCCAGGTCAGagtatatactgtgtatatattatatgtataagCACATTAAACATCTATTTATTAATAAA

Function

symbol description
osgepl1 Predicted to enable N(6)-L-threonylcarbamoyladenine synthase activity and metal ion binding activity. Predicted to act upstream of or within tRNA threonylcarbamoyladenosine modification. Predicted to be active in mitochondrion. Orthologous to human OSGEPL1 (O-sialoglycoprotein endopeptidase like 1).

NR:

description
probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial

GO: NA

KEGG:

id description
K01409 KAE1, tsaD, QRI7; N6-L-threonylcarbamoyladenine synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817443.1 True 1657 mRNA 0.52 7 4986399 4991501

Neighbor

gene id symbol gene type direction distance location
wdr75 wdr75 coding downstream 114257 4845336 ~ 4872142 (-)
LOC120570304 NA coding downstream 163522 4821819 ~ 4822877 (-)
asnsd1 asnsd1 coding downstream 164467 4818594 ~ 4821932 (-)
LOC120569766 slc35f5 coding downstream 188405 4773593 ~ 4797994 (-)
gpr39 gpr39 coding downstream 223237 4718956 ~ 4763162 (-)
ormdl1 ormdl1 coding upstream 6161 4997662 ~ 5001822 (-)
mstnb NA coding upstream 58997 5050498 ~ 5054623 (-)
hibch hibch coding upstream 77665 5069166 ~ 5092525 (-)
LOC120570040 NA coding upstream 102984 5094485 ~ 5098836 (-)
LOC120570600 NA coding upstream 148495 5139996 ~ 5146102 (-)
G122189 NA non-coding downstream 75511 4910632 ~ 4910888 (-)
G122178 slc40a1 non-coding downstream 144757 4838404 ~ 4841642 (-)
G122167 NA non-coding downstream 171016 4813163 ~ 4815383 (-)
G122157 NA non-coding downstream 210093 4773988 ~ 4776306 (-)
G122155 NA non-coding downstream 214013 4771173 ~ 4772386 (-)
G122209 NA non-coding upstream 49996 5041497 ~ 5041787 (-)
G122288 NA non-coding upstream 127632 5119133 ~ 5122669 (-)
LOC120570604 NA non-coding upstream 172571 5164072 ~ 5166525 (-)
G122347 NA non-coding upstream 557136 5548637 ~ 5552149 (-)
G122352 NA non-coding upstream 581197 5572698 ~ 5573559 (-)
glsb gls,LOC100711430,LOC102197968,LOC101482051 other downstream 13788 4917659 ~ 4972611 (-)
col6a3 col6a3 other downstream 826260 4107999 ~ 4160139 (-)
steap3 NA other downstream 1524696 3426024 ~ 3461703 (-)
G121877 clg16-21h2orf76,LOC101472530,LOC102207757,LOC108238817,LOC102789177,LOC103368446 other downstream 1546733 3414399 ~ 3439666 (-)
G121832 NA other downstream 1599934 3386067 ~ 3386465 (-)
G122404 NA other upstream 1020539 6012040 ~ 6014195 (-)
LOC120569614 NA other upstream 1649380 6640881 ~ 6681994 (-)
pcbp3 pcbp3,LOC100710924,LOC107660579,LOC103138153 other upstream 1790945 6782446 ~ 6871212 (-)
tmeff2a tmeff2 other upstream 2190430 7181931 ~ 7317632 (-)
traf3ip1 traf3ip1 other upstream 3408084 8399585 ~ 8448430 (-)

Expression


Co-expression Network