hs6st3b (hs6st3,LOC101476457)


Basic Information

Item Value
gene id hs6st3b
gene name hs6st3,LOC101476457
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 18466925 ~ 18535438 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817545.1
TGTAATTTCATCTGGCATGGCGGTAGACAGCTAAAAAGGCAGAGGCTGACGCTCAAACGCTTTTCCCACCAAACACTGTGGCATGTTGCAGCTACAGCACTGTGTACTGAGcgtagacagtatataagTGTTTAACACGATTGTGGGATGGACAGGAATTGGATAGAGCTCTCTCAGCCCAACCACGAAGAGAGCATAACGCGTATTTGTCGGCTCGGATGCAGCAGCATCCTCTCAAAAGCACTGCTTTCAGCACAGTCAGTCAGACCGCCCAACCCGCCGAGGATGCTGCCGGAGGACCCAGCCCGACAGTCCGAGCCGTGACACGTTTCTTCTGAAGTAAGTCTATCGCCAAAACGAAACACACTGCGATTTAGACCAAAAAATAAAGAAGGGGGAAAACTATAAAGTCTCATCAGCTGCCTAATTTTGAACTTGATACCGGAGTATGGGAGTCGTCGGCACGGATGCAGCTCTACTCCGGCTTTAGAAGTTGGACAGCCAGACATGTGAATGCCATGACTCTTGACTTTGGACAAGATTTCCAGCGCAGTGCAGACGGCATTATTATAGAATCCAAAAGGTGGACTTCTTCTTTTGTCCAGATTACCGGAGGGTGTTATCTGATCAACATGTGGCACCTAAATAATAGGCACCTTTAGTCTTTTCTGAGGCATGGAGCATTAGGCAATTGATCCCCGAAGAACCCATCAAGGTGCTACTTATTATTCAAAGTAATGGAATGAAGACAATATCTTGATATAATGGATGATAGGTCCAGTAAGCTCATCTTGGTTCCTATTTTAGCTGTCCTTTTTGTTATGATAGGTTATCAGTACATATGTCCCGCTGGCAGCAATTCGTGCCACTTTAAGACTGGGGAGAAATTAAGAGGGGTAAGCCTACTTTCCACCCCGTACCAGGACAGCGATGATTTCTACAGAGATCAAGACCTGGAGGATGACAGCCCTCCTAAACTACCGTCAAAATTCAACTTCACCGAAAGAGACCTTGACCGACACGTGGAGTTCAACATCAAAGGGGACGACGTGATAGTGTTTTTGCACATCCAGAAGACCGGGGGAACTACTTTCGGGAGACACTTGGTGAGGAATATTCGCTTGGAGCAGCCGTGCGACTGCAAACCCGGACAGAAGAAATGCACATGTCACCGACCAGGGAAAGAGGAGTCCTGGCTCTTCTCCCGGTTCTCTACTGGCTGGAGCTGCGGACTTCATGCAGACTGGACCGAGCTTTCGAACTGTGTGCCTGTCATTATGGATAAGAAGGAGGCCCAGAGAAATAAAAGGAACTTCTACTACATCACCATGCTGCGAGACCCAGTCTCCCGCTACCTGAGCGAGTGGAAGCACGTCCAGCGCGGAGCCACGTGGAAGACCGCCCTCCATATGTGTGATGGACGCTCGCCCACGCAGGACGAGCTGCCCACCTGCTATAGTGGGGATGACTGGTCCGGTGTCACCCTGACTGAGTTCATGAACTGCCCGTCCAACCTGGCCAATAACCGGCAGGTCCGCATGCTGGCTGACCTGAGCTTGGTGGGATGCTACAACTTATCCTCTATGAACGAGAGCCAGCGTAACCACATCCTCTTGAGCAGCGCCATGAGCAACCTGAAGAACATGGCTTTCTACGGCCTGACTGAGTTTCAACGCAAGACGCAGTACCTGTTTGAGCGGACGTTCAGCCTGCGCTTCATTTCCGCTTTCATGCAGATCAACAGCACGCGAGCTGCCAACGTGGACCTGAGCGAGCCCGTGCGCAGGCGCATCGAGGAGCTTAACTATTTGGACGTGCAGTTGTACGATTACGCGAAGGACCTGTTCCTCCAGCGTTTCCAGTTCACCCGCCAGAGGGAGCACCAGGAGGTGCGCTTGAAGAGGCGCGAGGAGAGGCGTTGGCTGAGGGAGCAAAAAGAGCAGGGCAGGCCATGGCCAGCCAAACACAGAGGGGGAGGAAATGGAGGCGGAAGAAGGGAAGGAGGGTTGGAGAAAGGGACTGACGGTGACTTCCCCACCACCACTGAGGACTATACAAGCCAAGTGGCCCGTTGGTGAGGCTCTGATCGAAAGAAAGAGGAGCAAGAGAGAGATTCCTCACAGACTTGTTTAAACctttgactctctctctctcacacatcctaagactctctctttctttctcaccaTTAATCTGTCTCCTGCATCCGTCTGTTTCTCAGCTTCAGTGTGATCCAAGTGCTCTGCTGTTTCTTTATGAAGACTGCCAAGTCTGTGAGTCTCACAGTAGCTCTGCCTTGGAGTGCCCTTTGGTGTCTTAAATCTTTAAATgctgtttatacttttttttttcttaaatacaTTCATTTAATTACATTCATTTGATTTTTGCCTTGGTTATTTATCATGTGTTGTATAATAAGACAGTAAACTGAggtgaaagaagaagaaaaaaacaatcaaaagaaGCTGCCATAGACTGCATTGCTTTTAATTTTGACATTCAAAGCAACTTTGATGAATGTTATTATAGTCTTTGTTGCAACGGGTACAAAACCATTTGAAAGGTGTAGTTGTAGAAGAACTGATGGTTGCATGTCACACGTCCACACTATACTGACAATTGGGGAGAGTGATTTCCAAAAGGTATGCAGTACTGTAAGCCAAAGtttataaaaacacaatgtatttcttgtattttttatttaatgacaATGAAACCCTCTCTAAATACCATGTTGTATGCATGCAATGCCCATGTTTTAAACCAAATTGTAGAAGACTATATCTGATGCTTATATTTTGGTTACAGTCCAATAGATATTATTTTCTCAAGTGATATACCTAGCAGACATTAACACGTCTCCCTCCCAAAgataacatgcacacacaaggcTAAAATTACAAAGAGGGTATCTTGCTGAGCAACAACTATATCGTTCCCCGTACAGTGGGTAGAACATTTTGCTTTTCAcatgagaaaatgaaagttctTTGTGATGAGAAAGGCATATTTTGTGAGTAATTCATTTTTGAAGTAGTGGGTTGCAGAGATAAAAAGTTGGTAAATAGTACAGGTGATGAAATGTGTCAGTGTGGCTGGTGTGTGGCCGGACTGTGAATTAGATGATCAGCATTCAGCTCTCACGGCCTTCCCCGTCACACTGGCTGCTTTTACATGTTTGTAGAGCTGAGGGCAACTGCACTGTGGGCAGCAAAAACACTTTAATGCCAGCAGAGCGCCAGCCCACAAAGACCAGCCTCAAAGCAGATAGTCgagaaataaaacatgtctGTCATTTCTTCTGCCCGATAGTTTCCAGTCCCTCAAATCCAATCAGCGCGGCAATATGTGAAGATGAAAGAGAGCTTGTTTTATCTGCTTAAATAGGCTTCAGTGATGTTTTTATGCCTCTTATCTCATATTTACTAAAATCCCTGCTTatcaaattaaatgttaacTAAATGTCAACATTGAAGTGGTAGAGCTGCTGCTATTTTAACAGTCATTTCTCATGTTTCTTCTCTGATTGCAGTTACTTATAAATACCTCAGATGGCacagtattgttttattttaaggaATGACCTGTGTTTTGTCTTGAGTGATTCATTCAGCTTATGCAGTGAATGTGTTGAATGAATACAGGTTTGAGCTGTCAGGAGTTGTATGGGTGCACTTGTCTGTACGGATGCACTTAGTCTGAGTTCAGTGAGTGTGAGGATGGATGGAAAAGAACAAAGACTAGGTGTATAGCACATTGATAACACTTGAGCTACAGCTCTGAATATTTAATCACTGTGTAGAATTTATAGCTGAATTCATGAagtttgtgttgtagcagtgaCCTAGATTGATGACAAAAGTTTCAAATTTCATGTCAAATGATTGTAAAGGTTTATTTGGGatattttttctctctattttatactgtatacatttcaaaggcactttaaagtgatggt

Function

symbol description
hs6st3 Predicted to enable heparan sulfate 6-O-sulfotransferase activity. Predicted to be involved in heparan sulfate proteoglycan biosynthetic process, enzymatic modification. Predicted to be integral component of membrane.

NR:

description
PREDICTED: heparan-sulfate 6-O-sulfotransferase 3

GO: NA

KEGG:

id description
K08103 HS6ST3; heparan sulfate 6-O-sulfotransferase HS6ST3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817545.1 True 3964 mRNA 0.45 3 18466925 18535438

Neighbor

gene id symbol gene type direction distance location
LOC120569776 mbnl2,LOC104947512,LOC102785098,LOC101474989,LOC104922684,LOC107389970,LOC102200241 coding downstream 7808 18442534 ~ 18459117 (-)
LOC120570503 rap2a,LOC106512668,LOC101166017,LOC103391592,LOC106582448,LOC105907999,LOC105933629,LOC103043765,LOC100332969 coding downstream 25553 18428988 ~ 18441372 (-)
LOC120569851 farp1,LOC100690924,LOC102786545,LOC102302212,LOC101473631,LOC102199780 coding downstream 47675 18352353 ~ 18419250 (-)
LOC120569811 dock9 coding downstream 115662 18261889 ~ 18351263 (-)
slc15a1a LOC104947517,LOC108239716,LOC100691459 coding downstream 205240 18250861 ~ 18261685 (-)
dnajc3a dnajc3 coding upstream 45798 18581236 ~ 18598455 (-)
LOC120569518 LOC101478235,LOC102203487,LOC102783581,LOC104922687,LOC104947508 coding upstream 64034 18599472 ~ 18601382 (-)
LOC120570204 NA coding upstream 67685 18603123 ~ 18605171 (-)
LOC120570238 cldn10,LOC103391834,LOC104947506 coding upstream 70988 18606426 ~ 18608814 (-)
gpc6b gpc6,LOC104947503 coding upstream 169250 18704688 ~ 18789294 (-)
LOC120569840 NA non-coding downstream 254969 18208738 ~ 18211956 (-)
G125000 NA non-coding downstream 374395 18092327 ~ 18092530 (-)
G124872 NA non-coding downstream 443448 18022409 ~ 18023477 (-)
LOC120569506 NA non-coding downstream 644438 17737284 ~ 17822487 (-)
G124691 NA non-coding downstream 1116179 17347911 ~ 17350746 (-)
LOC120570508 NA non-coding upstream 280408 18815846 ~ 18819321 (-)
G125108 NA non-coding upstream 292104 18827542 ~ 18828502 (-)
G125112 NA non-coding upstream 308662 18844100 ~ 18844338 (-)
G125113 NA non-coding upstream 309108 18844546 ~ 18845295 (-)
G125116 NA non-coding upstream 310394 18845832 ~ 18847369 (-)
prkra prkra other downstream 303176 18156732 ~ 18163749 (-)
LOC120569287 LOC103391581,LOC104924425,LOC103375901 other downstream 351828 18113110 ~ 18115097 (-)
fastkd1 fastkd1,LOC102780871 other downstream 1424553 17035373 ~ 17042372 (-)
LOC120570068 LOC103362129,LOC101485094 other downstream 2077031 16381250 ~ 16389894 (-)
gcgb gcg other downstream 2086160 16378488 ~ 16380765 (-)
G125089 dct,LOC102781940 other upstream 160042 18695480 ~ 18699802 (-)
G125090 NA other upstream 165449 18700887 ~ 18704677 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other upstream 696549 19231987 ~ 19258846 (-)
G125326 dopey2 other upstream 1060491 19595929 ~ 19597521 (-)
si:ch211-214p13.3 NA other upstream 1216263 19751701 ~ 19768586 (-)

Expression


Co-expression Network