LOC120569661


Basic Information

Item Value
gene id LOC120569661
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 11544608 ~ 11546302 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817658.1
gggtcAGGGGCACCGGTGGTGTAGAGCCTATATATGTAGCCATTAGAGATGTTTGCTTACAGACAAGCAATTGATCACCCTGCTGCACACACTGGTCCTAACGATAGGCCTACATTATCAACGAGCGGTAAACATGGAGGAGctTGATGTTACATACACCTTTGACAACAGCACTGACAACATGTCAGAGGAGTCTGGAGACTTTGACCTGGACTTCCAGGAGCCATGTGGCAGAGTGCTCAGCACTGAATTCAACAAGATCTTCCTACCGACAGTTTACGGAATTATATTTATTCTGGGAGTCATTGGCAATGGATTAGTCGTTGTTGTCATGGGCTACCAGAAAAAGGTCAAGACGATGACGGACAAGTACCGGCTCCATCTCTCCGTGGCTGACCTCCTCTTCGTCCTCACCCTGCCCTTCTGGGCCGTTGATGCTGCCAAATCCTGGTACTTTGGGggttttctctgtgtctctgtgcacATGATCTACACAGTGAACCTGTACAGCAGCGTGTTGATCCTGGCCTTCATCAGTCTGGACAGATACTTGGCAGTTGTGCGAGCCACCAACAGCCAAGCCACAAGGAAGCTGCTTGCGAGCAGAGTGATCTATGTGGGTGTGTGGCTGCCCGCCGCTGTGCTGACTGTACCTGACCTGGTGTTTGCCAGGGTGCAGGACAAAGGCTCTTCAAACTTCCTCTTTTTTGACGAtagcatgaagactggagaCTCCAGGATCATCTGCCAGCGCATCTACCCGCAGGAAACCAGTCTCATATGGACTGTCGTTTTCCGCTTCCAGCACATCCTGGTGGGCTTCATACTGCCCGGTCTGGTCATCCTTGTCTGCTACTGCATCATCATCGCCAAGCTGTCGCGAGGCGCCAAGGGCCAGGCTCTGAAGAAGAAAGCGCTGAAGACCACGGTCATCCTCATCCTTTGTTTTTTCTCCTGCTGGCTGCCCTACTGTGTTGGCATCTTTTTGGACAACCTGATGATGCTGAACGTGGTCTCTCAGTCTTGCGAATTGCAACAAGCGGTGGAGACGTGGATTTCTATCACAGAGGCGCTGGCCTATTTTCACTGCTGCCTCAACCCCATCCTCTATGCCTTCCTGGGAGTTAAGTTCAAGAAATCAGCAAAGAGTGCACTGACAGCCGGCAGCAGATCAAGTCAGAAAGtgaccctcatgacaaaaaagAGAGGGGCAATTTCATCGGTGTCAACTGAGTCCGAGTCCTCAAGTGTTTTGTCAAGTTAACAAACATTCGAACCCAGAGTCTGTGACTTGATAGcatgaggagagaaaaaaaaactaagcttCAATTTCAAAGAACTTACTACATTTTGTacagatgtaaaaaaa

Function

GO: NA

KEGG:

id description
K04189 CXCR4, CD184; C-X-C chemokine receptor type 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817658.1 True 1369 mRNA 0.50 2 11544608 11546302

Neighbor

gene id symbol gene type direction distance location
nxph2a nxph2,LOC101474521 coding upstream 368668 11156590 ~ 11175940 (+)
rabl3 rabl3,LOC102779363 coding upstream 410464 11130057 ~ 11134144 (+)
LOC120569327 LOC103358003,LOC100710305,LOC102781664,LOC101475894 coding upstream 1326958 10211110 ~ 10217650 (+)
LOC120570306 NA coding upstream 1440441 10099932 ~ 10104167 (+)
fev fev,LOC102784253 coding upstream 1589731 9949090 ~ 9954877 (+)
dars1 dars,LOC102778528 coding downstream 4613 11550915 ~ 11581353 (+)
pnkd pnkd,LOC100703611,LOC104967495 coding downstream 40706 11587008 ~ 11595507 (+)
gmppaa gmppa coding downstream 51572 11597874 ~ 11608077 (+)
asic4a asic4,LOC102777753 coding downstream 197033 11743335 ~ 11838604 (+)
LOC120570467 pdxk,LOC103353978,LOC100702179,LOC102214826 coding downstream 312150 11858452 ~ 11867638 (+)
G123279 NA non-coding upstream 119357 11409670 ~ 11425251 (+)
G123184 NA non-coding upstream 601705 10940052 ~ 10942903 (+)
G123181 kdelc1 non-coding upstream 611253 10931682 ~ 10933355 (+)
G123172 nepro non-coding upstream 622307 10919046 ~ 10922301 (+)
G123148 LOC105912973,LOC105900140,LOC105893694,LOC105893089,LOC105940532 non-coding upstream 742755 10801489 ~ 10801853 (+)
LOC120570367 NA non-coding downstream 72294 11618596 ~ 11634792 (+)
G123322 NA non-coding downstream 297078 11843380 ~ 11845465 (+)
G123323 NA non-coding downstream 299371 11845673 ~ 11846949 (+)
G123324 NA non-coding downstream 300755 11847057 ~ 11847386 (+)
G123374 NA non-coding downstream 468470 12014772 ~ 12016505 (+)
LOC120570060 NA other upstream 283966 11251917 ~ 11260642 (+)
lrp1bb lrp1b,LOC102779748 other upstream 925912 10335991 ~ 10618696 (+)
umps umps other upstream 1615717 9920624 ~ 9928891 (+)
G122846 NA other upstream 2747862 8795453 ~ 8796746 (+)
hdac4 LOC103356262 other upstream 3227915 8170700 ~ 8316693 (+)
serp2 NA other downstream 461355 12007657 ~ 12013200 (+)
G123539 sept10,LOC102785043,LOC103375466 other downstream 1503456 13049758 ~ 13279866 (+)
G123633 NA other downstream 1807004 13353306 ~ 13354085 (+)
cps1 cps1 other downstream 2089252 13635554 ~ 13696334 (+)
G123742 NA other downstream 2687030 14233332 ~ 14234070 (+)

Expression


Co-expression Network