ankzf1 (ankzf1)


Basic Information

Item Value
gene id ankzf1
gene name ankzf1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 15420802 ~ 15426678 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817729.1
CATGGACTAGTTTACAACCTTTGTCTGTGGACGTCTTCTCATTGACGCTTTCGAGCTTCCGTAGCTGTGTCATGCGGAAACACAAGGCAGCATAACTGTCAGCGCTTTTTTTCGAGCCATCCTTTTATGGTAACGTTAATGACGTAAAAAATAGGAATGACAATGACGACTGGAACCGACTACCGCTCCATCTTTCATTTGTGCCCAAATGATGAGGCTTTGATTGGACTGAGAAAAGTGAACCCCGTCCTAAAGCAGGCTGTAAACACTGACTCAGTCGCAGACGAATTGGAAGACAAATCACCAGAAGATGACAGACAACGGGAGTCCAGCCTGGTTAGAGAGGTGTCCGACAAGATGGTCTGCTCAGCCTGCAAATGCCTCTTTATTGCGCGTGAGGAACAGATAGAGCACTACAAACTTGACTGGCATCGCTTCAACTTGAGACTAAAGATTTCGGGAATGCCACCAGTCACAGCTGAAGAGTTTGAGAGGAAGACTGGAGCTGGAGACATGTCAAGTATCTCAGGCTCAGAGTCTGATTCAGAAGAAGACAACTCAGATAGTGAGAGTGGGGGAACAAGCAGCAACGTCACGGGCACTGATAATGAGAGCTCTGTTGAAACCAGTTTATTTACTGGCCGGCCCTCCAGCAAGCTGTTTTTCCAGAACTCAGTCGGGCAATATCTTTCAGTGTTCGGCTGCATTCTGCAGGGACAGTCCGATGATGATGATCAAGATGCAGTGTCCTCCCTGAAGGCCATAAGTAAAAAAACTGTGTGGGTCATTCTCATGACAGGTGGAGGACACTTTGCAGGTGCTGTATTCCAAGGAAAAGAAGTCCTTCAGCACAAGACCTTCCACCGATACACGGTGCGAGCGAAGCGAGGCACTGCCCAAGGACTCAGAGACTCTCAGAACCGCAGTCACACGCCCAAGTCTGCAGGAGCTGCTCTGAGGCGACACAATGAGGCGGCACTAGTCAAGGAGATTCAGGATCTTCTGGCTAGCTGGGCTGAACACTTGAAAGAGGCCTCTGCGATATTTGTACGAGCCCCCAGCTACAATAAAAGCATCTTTTTTGGTGGTCGTGCAGCTCCTTTTGACAAAAAAGATCCCAGGATCCACACAGTTCCATTTGCCACTCGCAGGGCAACCTTTCGAGAGGCACAGAGGGTACACGAGGTGCTTTCCACCATCCATGTTTATGGGAAAGACACAGACATGTCTGCAGTTTTCAGTCCATCTAAGAAGGCCTGGAAAACATCTGTTAAACTCACAGCACAAATAAATACCGGTCAAGAGAAAGCAGAAGAAAACGAAAAACACGATAGCTCTGATGAAGTAGAGGGTGGAGAGATCCAGCTGGAGATGGTGGAGTCGACAATAGGAACTCTGGACCTCAGGGAGTCTGAGATCTATCCCTCCAggcacaggaggaggaggaggaggaggaggaagaaggaggaggaggaggaggaacccaaactgcaaaatgaGGAGTTGAGTTACACAGAAGCAGACAATCAAGAAGAGGAAATGCCAGAGGCTACGCCGGCAGAAGACGCACCTCAAGAGGCGCAATCAAAGaacaagaggaagaggaaagcaCAGAGTAAGAAACAACTGGAAGAAATTGTTGATGAGTCGTCGGAGTACGGCATGAGGGATGAAGTGTTTACAGCCTGTAAGGTTGGGGATACAGATACTCTGCGTAGAGTCCTTCAGCTACCTGGAGAAACGTCAGAGAGTCAAGAGCAGTTGGACAGCAACCCTTCTGATGTCCCAAGTCCTCTTACTCTCCTTAATAAGAGCATAGACTCATCAGGGTTCACTTTGCTGCATGTAGCCTCAGCAGCTGCACAAAAGGCAGTGGTCAGGCTGCTCCTGGATGCAGGAGCAGACCCAGCCTGCAGGGATAACAAAGGGCAGACCCCGTATATTGTTGCCCCTGACAAAGACACAAGGAATGTGTTTCGTAAATACATGGGTGAGAATCCTGACAAATATGACTACAACAAGGCGCAGGTCCCTGGGCCACTAACGGCAGAGATTGAATCCAAAAAGACGGAGAAGAAAAAGGCACAAAAGGCATTGAGAAAACAGCGCGAAAAAGAGCAgaaggaggaaaagaggaaacaaGAGTTGGAGGCAGAGGAAAAGAAGAGGTTTGCATCTCTGACTGATCGTGAAAAGAGAGCTCTGGCAGCAGAGAGGAGGTTAGCGGAGCAAGTTGCTGCAACGGGAGTCGGCCTCTCTAATGTGAAGAGGTGCTGGTTGTGTGGAGAGTCTCTGCTTGGGAAGATCCCTTTTCAGTATCTAGAGTATTCCTTCTGCACCCCTCGCTGTGTCCAGGCACATCGAAAAGCCAACACTCTCCCAGGCAAGACCTAACCCCCATGTATAGAACACCCATTTGGAAAATTTCAGTTAAAAGGAAGCTACCTCATTAAAACTAAAAGTGAATTTGTGCAGCCTTGAAAGAATGCTAATATGGCTGTCTTGTCAGTGTGCTAGTTTCATTTTCAACTCtaaaatttaatttttaacattttagtaTGGCAGATGATCTCAGATAACTggatgcatatactgtatgaaaaCATCACGTAATAAATGTATAATTTATTCACAGTA
>XM_039817730.1
CATGGACTAGTTTACAACCTTTGTCTGTGGACGTCTTCTCATTGACGCTTTCGAGCTTCCGTAGCTGTGTCATGCGGAAACACAAGGCAGCATAACTGTCAGCGCTTTTTTTCGAGCCATCCTTTTATGGTAACGTTAATGACGTAAAAAATAGGAATGACAATGACGACTGGAACCGACTACCGCTCCATCTTTCATTTGTGCCCAAATGATGAGGCTTTGATTGGACTGAGAAAAGTGAACCCCGTCCTAAAGCAGGCTGTAAACACTGACTCAGTCGCAGACGAATTGGAAGACAAATCACCAGAAGATGACAGACAACGGGAGTCCAGCCTGGTTAGAGAGGTGTCCGACAAGATGGTCTGCTCAGCCTGCAAATGCCTCTTTATTGCGCGTGAGGAACAGATAGAGCACTACAAACTTGACTGGCATCGCTTCAACTTGAGACTAAAGATTTCGGGAATGCCACCAGTCACAGCTGAAGAGTTTGAGAGGAAGACTGGAGCTGGAGACATGTCAAGTATCTCAGGCTCAGAGTCTGATTCAGAAGAAGACAACTCAGATAGTGAGAGTGGGGGAACAAGCAGCAACGTCACGGGCACTGATAATGAGAGCTCTGTTGAAACCAGTTTATTTACTGGCCGGCCCTCCAGCAAGCTGTTTTTCCAGAACTCAGTCGGGCAATATCTTTCAGTGTTCGGCTGCATTCTGCAGGGACAGTCCGATGATGATGATCAAGATGCAGTGTCCTCCCTGAAGGCCATAAGTAAAAAAACTGTGTGGGTCATTCTCATGACAGGTGGAGGACACTTTGCAGGTGCTGTATTCCAAGGAAAAGAAGTCCTTCAGCACAAGACCTTCCACCGATACACGGTGCGAGCGAAGCGAGGCACTGCCCAAGGACTCAGAGACTCTCAGAACCGCAGTCACACGCCCAAGTCTGCAGGAGCTGCTCTGAGGCGACACAATGAGGCGGCACTAGTCAAGGAGATTCAGGATCTTCTGGCTAGCTGGGCTGAACACTTGAAAGAGGCCTCTGCGATATTTGTACGAGCCCCCAGCTACAATAAAAGCATCTTTTTTGGTGGTCGTGCAGCTCCTTTTGACAAAAAAGATCCCAGGATCCACACAGTTCCATTTGCCACTCGCAGGGCAACCTTTCGAGAGGCACAGAGGGTACACGAGGTGCTTTCCACCATCCATGTTTATGGGAAAGACACAGACATGTCTGCAGTTTTCAGTCCATCTAAGAAGGCCTGGAAAACATCTGTTAAACTCACAGCACAAATAAATACCGGTCAAGAGAAAGAAGAAAACGAAAAACACGATAGCTCTGATGAAGTAGAGGGTGGAGAGATCCAGCTGGAGATGGTGGAGTCGACAATAGGAACTCTGGACCTCAGGGAGTCTGAGATCTATCCCTCCAggcacaggaggaggaggaggaggaggaggaagaaggaggaggaggaggaggaacccaaactgcaaaatgaGGAGTTGAGTTACACAGAAGCAGACAATCAAGAAGAGGAAATGCCAGAGGCTACGCCGGCAGAAGACGCACCTCAAGAGGCGCAATCAAAGaacaagaggaagaggaaagcaCAGAGTAAGAAACAACTGGAAGAAATTGTTGATGAGTCGTCGGAGTACGGCATGAGGGATGAAGTGTTTACAGCCTGTAAGGTTGGGGATACAGATACTCTGCGTAGAGTCCTTCAGCTACCTGGAGAAACGTCAGAGAGTCAAGAGCAGTTGGACAGCAACCCTTCTGATGTCCCAAGTCCTCTTACTCTCCTTAATAAGAGCATAGACTCATCAGGGTTCACTTTGCTGCATGTAGCCTCAGCAGCTGCACAAAAGGCAGTGGTCAGGCTGCTCCTGGATGCAGGAGCAGACCCAGCCTGCAGGGATAACAAAGGGCAGACCCCGTATATTGTTGCCCCTGACAAAGACACAAGGAATGTGTTTCGTAAATACATGGGTGAGAATCCTGACAAATATGACTACAACAAGGCGCAGGTCCCTGGGCCACTAACGGCAGAGATTGAATCCAAAAAGACGGAGAAGAAAAAGGCACAAAAGGCATTGAGAAAACAGCGCGAAAAAGAGCAgaaggaggaaaagaggaaacaaGAGTTGGAGGCAGAGGAAAAGAAGAGGTTTGCATCTCTGACTGATCGTGAAAAGAGAGCTCTGGCAGCAGAGAGGAGGTTAGCGGAGCAAGTTGCTGCAACGGGAGTCGGCCTCTCTAATGTGAAGAGGTGCTGGTTGTGTGGAGAGTCTCTGCTTGGGAAGATCCCTTTTCAGTATCTAGAGTATTCCTTCTGCACCCCTCGCTGTGTCCAGGCACATCGAAAAGCCAACACTCTCCCAGGCAAGACCTAACCCCCATGTATAGAACACCCATTTGGAAAATTTCAGTTAAAAGGAAGCTACCTCATTAAAACTAAAAGTGAATTTGTGCAGCCTTGAAAGAATGCTAATATGGCTGTCTTGTCAGTGTGCTAGTTTCATTTTCAACTCtaaaatttaatttttaacattttagtaTGGCAGATGATCTCAGATAACTggatgcatatactgtatgaaaaCATCACGTAATAAATGTATAATTTATTCACAGTA

Function

symbol description
ankzf1 Predicted to enable metal ion binding activity. Predicted to be involved in ubiquitin-dependent ERAD pathway. Predicted to be located in cytoplasm. Orthologous to human ANKZF1 (ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1).

NR:

description
PREDICTED: ankyrin repeat and zinc finger domain-containing protein 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817729.1 True 2637 mRNA 0.48 16 15420802 15426678
XM_039817730.1 False 2634 mRNA 0.47 16 15420802 15426678

Neighbor

gene id symbol gene type direction distance location
tmem41aa tmem41a,LOC103374480 coding upstream 71994 15345051 ~ 15348808 (+)
smarcal1 smarcal1 coding upstream 144619 15264124 ~ 15276183 (+)
xrcc5 xrcc5 coding upstream 197562 15216368 ~ 15223240 (+)
tmem169b tmem169,LOC103361546,LOC102780762 coding upstream 205071 15210721 ~ 15215731 (+)
pfkla pfkl coding upstream 213101 15197169 ~ 15207701 (+)
myo10l3 LOC103370188 coding downstream 16776 15443454 ~ 15500197 (+)
pttg1ipb LOC104944099,LOC103370189 coding downstream 75439 15502117 ~ 15505588 (+)
fmnl2a fmnl2,LOC102797926 coding downstream 88783 15515461 ~ 15565842 (+)
kcnj3a kcnj3 coding downstream 241600 15668278 ~ 15696574 (+)
LOC120570324 NA coding downstream 476009 15902687 ~ 15909852 (+)
LOC120569294 NA non-coding upstream 4598 15415408 ~ 15416204 (+)
LOC120569306 NA non-coding upstream 170973 15243198 ~ 15249829 (+)
G123989 NA non-coding upstream 189119 15226085 ~ 15231683 (+)
G123967 NA non-coding upstream 339656 15079454 ~ 15081146 (+)
G123931 NA non-coding upstream 405504 15013151 ~ 15015298 (+)
G124150 NA non-coding downstream 109857 15536535 ~ 15567461 (+)
LOC120570206 NA non-coding downstream 288928 15715606 ~ 15739958 (+)
LOC120569337 NA non-coding downstream 461459 15888137 ~ 15891006 (+)
G124229 NA non-coding downstream 485537 15912215 ~ 15912428 (+)
G124323 NA non-coding downstream 853921 16280599 ~ 16280878 (+)
trpm2 trpm2 other upstream 261865 15137587 ~ 15158937 (+)
si:dkeyp-118h9.7 LOC102200331 other upstream 426968 14976595 ~ 14993834 (+)
G123742 NA other upstream 1186732 14233332 ~ 14234070 (+)
cps1 cps1 other upstream 1724468 13635554 ~ 13696334 (+)
G123633 NA other upstream 2066717 13353306 ~ 13354085 (+)
sumo3b sumo3,LOC106562996,LOC107668404,LOC106523318 other downstream 80306 15506984 ~ 15573848 (+)
galnt13 galnt13,LOC102796746 other downstream 191836 15618514 ~ 15661014 (+)
LOC120570321 NA other downstream 544304 15970982 ~ 15977874 (+)
dap1b dapl1 other downstream 672593 16099271 ~ 16101642 (+)
col28a2a LOC103355072,LOC104961148,LOC102781941 other downstream 1561393 16988071 ~ 17023560 (+)

Expression


Co-expression Network