glb1l (glb1l,LOC100708354,LOC102776574,LOC102302597)


Basic Information

Item Value
gene id glb1l
gene name glb1l,LOC100708354,LOC102776574,LOC102302597
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 15426799 ~ 15432513 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817731.1
AGAAGCGGGCAGGATGTTGATGATGTTTCTTCCTCCTGTTAACCAGTTAACTCTAACAGACATAAAATAGCAGTAGCATAATACAAATGAATGAATTAGTTGTAGGTTTAGTTCTCGCGGAAAGGCAGCGGACATGGCTGCCGGTGTCTTACTCTTTGTTGCTGTGAACCTCGCCTGTTTGTCTGTCAGTGGAAACTTGGCCTCTGGAGAAAGATCATTCTCTATAGACTATAAAAACAACTATTTCCTCAAAGATGGGAAGCCTTTTCAGTACATCTCAGGCAGTATTCACTACTCCAGAATCCCACGGTACTACTGGAAGGACCGGCTCGTAAAGATGTACATGACTGGACTCAATGCTATCCAAGTATATGTGCCCTGGAACTTCCATGAGGCAGTACAGGGGGTCCACAACTTCACAGGGGGACAAGATCTGGAGCATTTTTTGGATCTGGCGAATCAGACAGGTCTTCTGGTCATCCTGCGTCCCGGACCATACATCTGTGCAGAGTGGGAAATGGGTGGATTGCCTGCGTGGCTACTTCAGAAACCAAACATCATACTTCGCTCAGCTGACGCAGATTATGTCGAGGCAGTCAGCAACTGGCTTGCTGTTCTTCTGCCCAAAATGAAGCCATGGCTTTATATCAACGGGGGCAACATCATTACTGTCCAGGTGGAGAATGAATATGGAAGTTACTTCGCTTGTGACTACAACTACATGCGTCACCTGCGGACTCTATTTCGCTTCTTTCTTGGCGAAGACACGGTCCTGTTTACCACCGATGGAAACACAGACAAGGAAATGACATGCGGGACTCTGGAAGGATTATATGCCACAGTAGACTTTGGCACAGACACCAACATAACTAAAGCCTTTAACCGGCAAAGAAGGTTTGAACCTCGAGGGCCCCTGGTGAATTCAGAGTTCTACACTGGCTGGTTGGACCACTGGGGAGATCAGCATGCTGTGGTTGAGGCTCAGAAGGTCAGCAGAGTGCTAGGAGAAATGCTAGCCATGGGGGCCAACGTCAACATGTACATGTTTGAAGGAGGCACTAACTTTGGCTATTGGAATGGTGCTGATCATGACACGAAGTTCCGCTCAGTAGTGACTAGTTATGATTACGACGCCCCGCTCTCCGAGGCAGGAGACCCCACAGAGAAGCTGTTGGCCATCAGAGATGTCATTAAGCAGTTCAGAGATATTCCCTCTGGCCCCATGCCACCAGCAACTCCTAAGTTTGCCTATGGCTTTGTGACCCTGaaaaagGTTGGCAACATCAGCGGTCTATTGAACACCCTCTCACCCGTCGGGCCAGTGAAATCCCAGTATCCTCTGACATTTGAAGAGATGAAACAGTTCTATGGATACATGCTTTACCGGACCACGCTGCCCCGGAACCTCTCGCAGCCTACACCACTTATCTCTCCACTCAATGGGGTTCATGACCGTGCATATGTATCCGTCAATGGGGTTTTCCAGGGTCTTTTAGAGAGAGACACTAAGCTGGTGATCAACGTCACTGGACAGCAGGGGGACACTGTGGACATCCTCATTGAGAACATGGGCAGGGTAAACTTTGGCAGCAAGATCAATGACTACAAGGGCCTTTTGAGCAACCTGATCCTGGGTAAAGATGTACTGACTGACTGGAAGATCTACCCTTTGGACATCGATGGAGCCATTGCTGGTGGATGGCCTCATTCAGACAGTCAAAAGTCCTTCCCTGCCCCTGAGAAAGACCCTTCAGTTGGGCCAGTCTTCTACATGGGAACCTTACAGCCCAACGGCCTCGCCTGGGACACCTTTCTCAAACTCAATGAATGGACAAagGGTCAGGTTTGGATTAATGGTGTTAATCTGGGACGATACTGGCCAGCAAGGGGCCCTCAACTGACTCTTTATATCCCTGGACCCCTACTCAGCAGCACCCTGCCCAACAACATCACAGTGCTGGAGCTGGAGGGGGCCCCAGCACACTTACGGGTTCTCTTCATGGACCGGCCTCAGCTTAATGTCAAAAAGTCTTAACAGAGGACACTTAGTTTAGTAGCACAACATTTAGCTGTACAAATTATACATCCCGATATCTGTATGAAGCAACTTTGACTGAAGCCGAGTAAAACTAGTCCTCTGAACAATTCACTTGACGCAGGAAAATTTGCTCCATGCTTTTTTCCAGATTATTTCGGTGGCATTAATATTTAATCACTTCAGATATCCGTGTATCATCTGTAGCCAATTCTTTATCATCACAATCCAAACTGCTTTAAAACAGCAGCTTCAATAAAAAAGTGATTCATTGA

Function

symbol description
glb1l Predicted to enable beta-galactosidase activity. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be active in vacuole. Orthologous to human GLB1L (galactosidase beta 1 like).

NR:

description
PREDICTED: beta-galactosidase-like

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0004565 beta-galactosidase activity molecular_function

KEGG:

id description
K12309 GLB1, ELNR1; beta-galactosidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817731.1 True 2310 mRNA 0.48 16 15426799 15432513

Neighbor

gene id symbol gene type direction distance location
LOC120569293 LOC104943022,LOC104919017,LOC103370185 coding downstream 8889 15414619 ~ 15417910 (-)
LOC120569292 LOC103370192,LOC103461666,LOC104943023,LOC100710321,LOC105937152 coding downstream 13020 15411570 ~ 15413779 (-)
tra2b tra2b coding downstream 17328 15402680 ~ 15409471 (-)
igf2bp2a igf2bp2 coding downstream 27692 15352449 ~ 15399107 (-)
ehhadh ehhadh coding downstream 82103 15333900 ~ 15344696 (-)
prpf40a NA coding upstream 135486 15567999 ~ 15585951 (-)
rprma rprm,LOC102780493 coding upstream 182161 15614674 ~ 15615857 (-)
nr4a2a nr4a2,LOC106586168,LOC104920078,LOC103363922 coding upstream 380171 15812684 ~ 15817665 (-)
LOC120570325 NA coding upstream 477433 15909946 ~ 15911626 (-)
LOC120569256 cytip coding upstream 483386 15915899 ~ 15919288 (-)
trnak-uuu_17 NA non-coding downstream 9527 15417200 ~ 15417272 (-)
G124014 NA non-coding downstream 230581 15178318 ~ 15196218 (-)
G124001 NA non-coding downstream 302854 15116194 ~ 15123945 (-)
G124000 NA non-coding downstream 303345 15115730 ~ 15123454 (-)
G123959 LOC102200331 non-coding downstream 442384 14984014 ~ 14984415 (-)
G124136 NA non-coding upstream 42745 15475258 ~ 15476148 (-)
G124146 NA non-coding upstream 70235 15502748 ~ 15504712 (-)
LOC120569338 NA non-coding upstream 432019 15864532 ~ 15901689 (-)
G124304 NA non-coding upstream 669643 16102156 ~ 16102355 (-)
G124324 NA non-coding upstream 848071 16280584 ~ 16280878 (-)
G123960 NA other downstream 433010 14984485 ~ 14993789 (-)
G123886 NA other downstream 632302 14784561 ~ 14794497 (-)
ikzf2 ikzf2 other downstream 1225070 14175814 ~ 14201729 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other downstream 2806984 12619353 ~ 12619815 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other downstream 3181794 12232420 ~ 12245005 (-)
G124303 dapl1 other upstream 666765 16099278 ~ 16101593 (-)
LOC120570587 LOC100705152,LOC102292123,LOC101476258 other upstream 775177 16207690 ~ 16222736 (-)
gcgb gcg other upstream 945975 16378488 ~ 16380765 (-)
LOC120570068 LOC103362129,LOC101485094 other upstream 948737 16381250 ~ 16389894 (-)
fastkd1 fastkd1,LOC102780871 other upstream 1602860 17035373 ~ 17042372 (-)

Expression


Co-expression Network