tmem41aa (tmem41a,LOC103374480)


Basic Information

Item Value
gene id tmem41aa
gene name tmem41a,LOC103374480
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 15345051 ~ 15348808 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817756.1
ATGCGCTCCCTCGTCGGACTAATCGCTGTTGTTGCTACAGCCAGCTTGTACCTGTATTCGCTGTCCCTGTATCTTCCTGCGGCACCGCGGCGACGTCCTCATCCAGCTGCCGACAGAAAACATGTGGAGACAGAGGTGTCCACTGACAGCTCCGAAGAACCCAGCAGCAGGTTGAAGTTCCCCTCAGATCTGGAGGAGCTGAGGGAACTGGCTGAGCTCCTGCAGTTTTACAAGACAGAGCACACTGGATATGTCCTGCTACTCTTCTGTAGTGCATATCTCTACAAGCAGTCCTTTGCCATTCCTGGATCCTCATTCCTGAACATTTTAGCAGGAGCTATATTTGGACCATATCAAGGACTGCTGCTTGCCTCTGTGCTCACCACTGTGGGGTCCACCATGTGCTACCTCCTGTCCCAGGCCTTTGGAAAGCGCTACATTGTTACCCTCTTCCCTGATAAAGTCTCCATGCTACAGAGGAAGGTTGGGGAGAACCAGGACTGTTTGCTGTTCTTTCTGCTCTTCCTGAGATTCTTTCCCATGACTCCCAACTGGTTTCTGAACATGTCTGCCCCTATTGTCAACATCCCCATCACCTTCTTCTTCTGCTCAGTCTTCATTGGCCTCCTGCCGTATAACTTCATCTGTGTACAGACGGGCGTCATGCTGTCTGAGGTGGCCTCGCTGGATGACTTGTTTTCCTGGGAGAGGTTGCTGCAGCTGCTGGCCATCGCCTGCATGGCTCTGCTGCCCGGCGCCCTCATCCGCCACTTCAGTCAGAAGCGTCTCAAACTGGATGTCCAAACGCAGAATGGGCTCATCACAGATAAGAAGGTCCAGTGATTTGTTCTGGGAATTAATTTGTTCCCTGGTGCTTTAATGCCATCTGCCCTCAAGAGTGAATgtatttaaagaaaaactttGCCCACACAAGTGTAAAGGTTTCTTTTATCTGGAGTCCCTTACTGTTCTGCAGCCATCTGGAGATGGAGAGCTTTTAGGAAAAAATAAGACTGGCACAGTGGGATTTGATTCCAAGTTTTTTATGTAACCAAATGTTGGTGTTTTTGTGCCACAACTTTGTTTGGGCACAGTATGTATATAGAtgtatgaatgtacagtagtcatatggagagagggaaggaatttAAGgagactgttattatacagtaaTAAGAGTATTGCTTCAATGTAAACAGCTAGTGTTTCAAGTGCCTGTCACACAGTTAAAGACTGTTTGAAACTTCTACCTCCAACATGGACTTGTGGAAAAGTTCATGTAACAGCCTACTCGTGTTTGTTGTTGCTGGATGGTTAAGATGATTGTTTTTTGGGTTTGTGATGTCAATTATTTGATTTGTAACTGAAATGCGTATCTTGTTTGACAATCACATTTTGCAATTTATAAATTGTAATACTATTACTATTTTTAAACTTTGAACTCAAAGTTTTTCAAATTGTATAATTTGGCCTCAGTAACCAATTGAATTACATCCTGGTTTTGTCATGATA

Function

symbol description
tmem41a Predicted to be integral component of membrane.

NR:

description
transmembrane protein 41A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817756.1 True 1512 mRNA 0.45 5 15345051 15348808

Neighbor

gene id symbol gene type direction distance location
smarcal1 smarcal1 coding upstream 68868 15264124 ~ 15276183 (+)
xrcc5 xrcc5 coding upstream 121811 15216368 ~ 15223240 (+)
tmem169b tmem169,LOC103361546,LOC102780762 coding upstream 129320 15210721 ~ 15215731 (+)
pfkla pfkl coding upstream 137350 15197169 ~ 15207701 (+)
si:ch211-45c16.2 map3k13 coding upstream 148832 15160313 ~ 15196219 (+)
ankzf1 ankzf1 coding downstream 71994 15420802 ~ 15426678 (+)
myo10l3 LOC103370188 coding downstream 94646 15443454 ~ 15500197 (+)
pttg1ipb LOC104944099,LOC103370189 coding downstream 153309 15502117 ~ 15505588 (+)
fmnl2a fmnl2,LOC102797926 coding downstream 166653 15515461 ~ 15565842 (+)
kcnj3a kcnj3 coding downstream 319470 15668278 ~ 15696574 (+)
LOC120569306 NA non-coding upstream 95222 15243198 ~ 15249829 (+)
G123989 NA non-coding upstream 113368 15226085 ~ 15231683 (+)
G123967 NA non-coding upstream 263905 15079454 ~ 15081146 (+)
G123931 NA non-coding upstream 329753 15013151 ~ 15015298 (+)
G123930 dip2a non-coding upstream 333615 15010978 ~ 15011436 (+)
LOC120569294 NA non-coding downstream 66600 15415408 ~ 15416204 (+)
G124150 NA non-coding downstream 187727 15536535 ~ 15567461 (+)
LOC120570206 NA non-coding downstream 366798 15715606 ~ 15739958 (+)
LOC120569337 NA non-coding downstream 539329 15888137 ~ 15891006 (+)
G124229 NA non-coding downstream 563407 15912215 ~ 15912428 (+)
trpm2 trpm2 other upstream 186114 15137587 ~ 15158937 (+)
si:dkeyp-118h9.7 LOC102200331 other upstream 351217 14976595 ~ 14993834 (+)
G123742 NA other upstream 1110981 14233332 ~ 14234070 (+)
cps1 cps1 other upstream 1648717 13635554 ~ 13696334 (+)
G123633 NA other upstream 1990966 13353306 ~ 13354085 (+)
sumo3b sumo3,LOC106562996,LOC107668404,LOC106523318 other downstream 158176 15506984 ~ 15573848 (+)
galnt13 galnt13,LOC102796746 other downstream 269706 15618514 ~ 15661014 (+)
LOC120570321 NA other downstream 622174 15970982 ~ 15977874 (+)
dap1b dapl1 other downstream 750463 16099271 ~ 16101642 (+)
col28a2a LOC103355072,LOC104961148,LOC102781941 other downstream 1639263 16988071 ~ 17023560 (+)

Expression


Co-expression Network