slc38a11 (slc38a11)


Basic Information

Item Value
gene id slc38a11
gene name slc38a11
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 16652860 ~ 16658039 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817806.1
CGCTGTTGAGACTTTTTAAGGCTTTAGTTGAGTACAATTGACAGGCTTTCTTTATAAACTTCGTCTAATTTAGCCAAACCGCAAATATGTGAGAGTTAAACACGCAGGAGACGTGGACAAAGAGGAGCCACATCATCGACCAGCTATAGGTGCTCAAAATGGCTCAACAGctAAACAATGAAGAAGGGACCACATTAATTCCTCCACAAAAAGCTGCTGGAGAGACAAGAAGTTCAATGATATCTGCGtcttttaattttatcaatTCCATTATAGGATCTGGAATAATAGGTTTACCATATGCGTTGAACCAGGCAGGGCTTCCCCTTGGCCTTTTGCTGTTGATAGTTGTTGCATTCATCACAGACTACTCAATCATCTTACTAATTAAAGGAGGCAACCTGTCAGGGACAAACAGTTATCAGTCACTGGTGCAAAGCACGTTTGGGTTCCCTGGATTTCTGATTTTATCTGGACTTCAGTTCCTTTATCCTTTCATTGCTATGATCAGCTACAATATCACAACTGGTGACACATTGACCAAAGTATTTCAGAGAATACCAGGAGTTGGTCCAGATCACATACTTGCAGAGCGTCATTTTGTGGTCTTGCTATCGACCGTTGCATTCACGCTGCCTCTATCACTTTACCGAAACATAGAGAAACTTGGGAAGGTGTCCTTCCTGTCAATGGTGCTGACATTTACCATCCTCATCATTGTAATCATCAGAGCAGCTACCTTTGGACCCCAAATACCCCCTACAGAGAATGCATGGGCATTTGCAAAGTGGAATGCAATTCAGGCAGTTGGCGTGATGTCATTTGCCTTCATATGCCACCACAACAGCTTTCTTATCTATGGTTCTCTGGAGCAGCCCACGCTAGCTAACTGGACTCGGGTCACCCACGTGTCTGTTGGCTCTGCGCTAATAATCAGTGCTGCATTTGCTGTTGCTGGCTATACCACCTTTACTGGCTACACGCAAGGAGACATATTTGAGAACTACTGCAGAAATGATAACCTGGCAACATTTGGTCGCTTCTGTTTTGGCCTCAGCATAATAACCACATTTCCACTGGAGTGTTTTGTTACACGAGAGGTGCTATCCAATGTCATTTGCAGTAGGGATCTTACAAAAGCTGAACATGTGGCAATAACGTTTCTCATAGTTTCAGTTTGCACATCAATATCTTTGGCCTATGACTGTCTGGGAGTTGTTTTAGAGCTGAATGGTGTTCTGAGCGCCACACCTCTGATCTTCATCATTCCATCTGCATGCTTCGTCAAACTCTCCCCTGGCCGCTGGTTCCAGGGTGAAAACTTGATACCCACCATCCTGATATTAATCGGCTTGTTTGTCATGATCACCGGTTTGACCATGATCGGCCTCTACCCACAAGACTGTTCACACGGTGTGGAGATGTACTACTGTGAAGGCGCCAATACCTCTAGCACTGTACTACCTGTGTGAAATTAaccaaatatttaattttttaaaactttttctaaCAACACTTAAGGgcagaatatactgtatgtacggTATGTGGACAGCCCTGTCAGCATCCCTTTATGTACTTGATATGGGGCTGTTTTCCATGGTTTGGGATAAAGTCTCCTTAGTTCCAGTTAAGGGAAATCTTAATGTTACACCACACAATTATATTTTAGAAAATAGTGTGCTTCCAACTTTGTGGCAACAGTTTCCTTTCAAAGAGCATTTCCTATGTCCACAAAGCGAGGTCCATTGTGTTATTGAGTTTGGTGTGGAAGAACTTGACTGGCCTGCACAGAGCCCTGACCttatattatgtattatgtcCCTATGGGACAATAAagactctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatttatttattaacatcTTTGAGATGAACTGCAACATTGACTGTGAACCAGACCTTATTGCACATTAATGCCCGACATCACTAATGCTCTTGTAGCTAAATAGGAGTAAATTATATGATTTGCTTATATTATATTGGCCTATAGCAGCATAGTAATACCCATGGTTTTGGAATGAGATGTTTAACAGTCACATATGGCTGTAATGTTGAGATGCACACATACTTTTGGCCCTTTACTACACGTGGATGtgtttaatttgttgtttttctttaggAATAAATACTCTGTCTTGATAA

Function

symbol description
slc38a11 Predicted to enable amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport. Predicted to act upstream of or within amino acid transport and sodium ion transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC38A11 (solute carrier family 38 member 11).

NR:

description
putative sodium-coupled neutral amino acid transporter 11

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K14997 SLC38A11; solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817806.1 True 2217 mRNA 0.41 12 16652860 16658039

Neighbor

gene id symbol gene type direction distance location
LOC120569755 NA coding downstream 47376 16596921 ~ 16605484 (-)
grb14 grb14 coding downstream 56040 16562742 ~ 16596820 (-)
fign fign coding downstream 137236 16492362 ~ 16515624 (-)
LOC120570230 kcnh7 coding downstream 209690 16403562 ~ 16443170 (-)
ifih1 NA coding downstream 251694 16390041 ~ 16401166 (-)
csrnp3 csrnp3 coding upstream 54713 16712752 ~ 16736786 (-)
stk39 stk39 coding upstream 175654 16833693 ~ 16862226 (-)
spc25 NA coding upstream 229789 16887828 ~ 16891674 (-)
abcb11a abcb11,LOC102784145 coding upstream 237637 16895676 ~ 16905140 (-)
lrp2a lrp2 coding upstream 280211 16938250 ~ 16976167 (-)
LOC120569756 NA non-coding downstream 30449 16621943 ~ 16622411 (-)
G124382 NA non-coding downstream 164364 16487830 ~ 16488496 (-)
G124366 NA non-coding downstream 250830 16401758 ~ 16402030 (-)
G124350 NA non-coding downstream 294976 16345288 ~ 16357884 (-)
G124346 NA non-coding downstream 330203 16322485 ~ 16322657 (-)
G124463 NA non-coding upstream 105616 16763655 ~ 16776734 (-)
G124503 NA non-coding upstream 225395 16883434 ~ 16884174 (-)
G124539 LOC100705499,LOC104961141,LOC102783488,LOC107082002,LOC103461718 non-coding upstream 252132 16910171 ~ 16931466 (-)
G124561 NA non-coding upstream 368295 17026334 ~ 17027190 (-)
G124580 ppig non-coding upstream 389967 17048006 ~ 17114063 (-)
LOC120570068 LOC103362129,LOC101485094 other downstream 262966 16381250 ~ 16389894 (-)
gcgb gcg other downstream 272095 16378488 ~ 16380765 (-)
LOC120570587 LOC100705152,LOC102292123,LOC101476258 other downstream 430124 16207690 ~ 16222736 (-)
G124303 dapl1 other downstream 551267 16099278 ~ 16101593 (-)
G123960 NA other downstream 1659071 14984485 ~ 14993789 (-)
fastkd1 fastkd1,LOC102780871 other upstream 377334 17035373 ~ 17042372 (-)
LOC120569287 LOC103391581,LOC104924425,LOC103375901 other upstream 1455071 18113110 ~ 18115097 (-)
prkra prkra other upstream 1498693 18156732 ~ 18163749 (-)
G125089 dct,LOC102781940 other upstream 2037441 18695480 ~ 18699802 (-)
G125090 NA other upstream 2042848 18700887 ~ 18704677 (-)

Expression


Co-expression Network