slc25a12 (slc25a12,LOC102297988)


Basic Information

Item Value
gene id slc25a12
gene name slc25a12,LOC102297988
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 17304771 ~ 17324588 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817855.1
CGAGCAGACAGGAAACGCTATAACACACATCTGATGACCAAGTCTCTGTCCGGAGCCTGTGTCTCGGCAGCTCCTCGTTCGAAACACCGCCCTGACAGAAAAGGACAATACTTGGCTAAATATATATTTGGTGTCTCAGACCTCGGCAGTCCTGTCATGCTCGCTGTCATCCTCCTGCCCAGCGCCTGCGCTAGTCCGCGGCAGCTGACGTCACACCCAGCATGGCGGTCAAGGTGCAAGCAACAAAAAGAGCCGACCCCCATGACTTGAAGACTATTTTTCTGAAGTATGCCAGAGTGGTGGAGGATGGAGAGCATTACATGACCCCTAGCGACTTTGTACAGAGTTACCTGGGTCTGCATGCACAGCCTCAGCATAATCCCAAAACTGTGGAGCTGATAGCTGGAGTGGCTGACACGACTAAAGATGGACTGATCTCTTTCCAGGAGTTTCAGGCCTTTGAGTCAGTCCTATGTGCCCCGGACGCCCTGTTCATAGTAGCCTTTCAGTTGTTTGACAAGACTGGCACAGGGAACATCTCATTTGAGAATGTACGTGACATCTTCAGCCAGACCACAGTTCATCACCACATTCCCTTCAACTGGGACTGTGAGTTCATCAGGCTACACTTCGGCCATGAAAGAAACAAGAACCTCAGCTACACAGAGTTCACCCAGTTTCTGCAGGAGCTGCAGTTGGAGCATGCCCGCCAGGCATTTGCACAAAAAGACAAGAAGAAAATTGGCACCATCACTGCCTTGGACTTCAgcgacatcatggccaccattCGACATCACATGCTGACTCCATTTGTAGAGGAGAACCTGGTTTCAGCTGCAGGAGGCAGCACCTCCCACATGGTGAGCTtctcctacttcaatgcctTCAACTCCCTCCTCAACAACATGGAGCTGGTCCGCAAGATTTACAGCACCCTCGCCGGCACTCACAAAGACACACTTGTGACCAAAGAGGAGTTTGTTCATGTTGCAAATAAGTTTGGTCAAATCACTCCGATGGAGATTGACATCCTGTACCAGCTCGTTGGTCTCCACTCTCACTCCGGGCGGCTGAACCATGCAGACATCGAGAGGATAGCCCCGTTGGAGGAAGGAGCCATGCCATACCACCTAGCAGAGGTCCAGAGACAGCATGCTCACGAAACGTCTCGGCCCATCTGGCTCCAGGCTGCAGAGTCTGGCTACAGGTTTTCTCTGGGCTCAATCGCTGGAGCGACCGGTGCCACGGCTGTGTACCCCATCGACCTGGTGAAGACGCGCATGCAGAACCAACGCTCCACAGGCTCCTTTGTAGGAGAACTGATGTACAAGAACAGCTTCGACTGTGCGAAGAAAGTGCTCCGTTATGAGGGCTTCTTCGGATTCTACAGAGGTCTGCTCCCGCAGCTCATCGGCGTTGCCCCGGAGAAAGCTATCAAACTCACGaTGAATGATTTTATCAGAGACAAGTTCACCACACAAGATAATACCATCCCTCTGCCTGCAGAGATTCTCGCTGGTGGATGTGCTGGAGCTTCCCAGGTGATTTTCACCAATCCTCTGGAGATTGTTAAGATCCGTCTGCAGGTGGCTGGAGAGATCACCACAGGCCCCAGGGTCAAAGCCCTGAGTGTTGTGAGAGACCTGGGTTTCTTTGGCCTCTACAAGgGAGCCAAAGCATGCTTCCTGCGTGACATCCCCTTCTCCGCCATCTACTTTCCTGTTTATGCCCACACCAAGGAGAAATTGGCAGACGAGGACGGAAGGCTTGGGGCACTACAGCTGCTCACTGCTGGAGCTATTGCAGGTGTACCAGCGGCTTCGCTGGTGACCCCTGCTGATGTCATCAAGACCAGGCTCCAGGTAGCGGCCAGAGCAGGCCAGACGACATACAACGGAGTCATTGACTGCTTCAGGAAGATCCTCATGGAGGAAGGTTTCAGGGCGTTTTGGAAGGGTGCAGGAGCTCGCGTCTTCAGATCTTCACCACAGTTTGGTGTAACCCTGGTGACATATGAACTGTTACAGAGATGGTTCTACTTGGACTTCGGAGGACATCGCCCTGCCGGCTCTGAGCCTACTCCGAAACCCCTGATGGACCTTCCCTCTGTGACGGCAGACCACGTAGGCGGCTACCATCTGGCTGCTGCAACCTTTGCTGGCGTGGAGAGAAAGTTTGGTCTGCACCTGCCCAAGTTCAAGCCTTCTGGAGAGGGGACAATCAAACCAGCGGTGCCCAAAACGGAGCCACAGGCTTCATAAAGCGTCACTCATCGTGCCTGCGAGGGCTGCATGCTCCTCCGGTCATTAGGTTTCCTCCAAAATGGTTTTATTGAGCCACGTTTCAATTAAATACATTTGAGCGGTTGTCTTACTTTGAATGCTGCATGAGTATGgctttattgcattttctttGCATAGCTTGCACAACTTTATTGTACATATTGTACTTCTCCACAGAGGGACATTATGGCATGACGAAGGATTGTAACTGCGTTTTCTGGTGTGCAATAGCTTTGGTGTGCATGTGTCCGTTAAACTTAAGAGACACAAGGATGTACAGATGTTTTCAAAagtgtttattttgaaatcatGACCAGGGACTCggtaaataatttaaatgtatttattgtattttattgaaataaatcattcagacTGTTTGTTTCTACTGTGTGAAAAGTACATTCTCAGTTTTGACACCAAGCTTTGAGATTCTTCAGGAAACAAACAATCTCTGTTCAGATCCTGTCAACATACATTACTGAGCAGTTACAGCATACATGATCATCTTCTTAGGCATTGAGGATATTCCAACTATCTCTAGTCTAACCAGCTGCACTGATTAAGTGAAAACGTGCAGTATTACAATACAGAAAGTAGAAACATTAGTATTTTACAAACAAGTGAATATTTAGGTTATTAAGTCTCAAA

Function

symbol description
slc25a12 Predicted to enable L-aspartate transmembrane transporter activity and L-glutamate transmembrane transporter activity. Predicted to be involved in L-glutamate transmembrane transport; aspartate transmembrane transport; and malate-aspartate shuttle. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Is expressed in several structures, including anterior neural keel; central nervous system; neural plate; neural tube; and pronephros. Human ortholog(s) of this gene implicated in Asperger syndrome; autistic disorder; and developmental and epileptic encephalopathy 39. Orthologous to human SLC25A12 (solute carrier family 25 member 12).

NR:

description
calcium-binding mitochondrial carrier protein Aralar1-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K15105 SLC25A12_13, AGC; solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817855.1 True 2933 mRNA 0.49 18 17304771 17324588

Neighbor

gene id symbol gene type direction distance location
mettl8 mettl8 coding downstream 26888 17271740 ~ 17277883 (-)
tlk1a tlk1 coding downstream 33729 17250382 ~ 17271042 (-)
mettl5 mettl5,LOC102779255 coding downstream 226646 17074358 ~ 17078125 (-)
ccdc173 NA coding downstream 246460 17049924 ~ 17058311 (-)
LOC120570071 lrp2 coding downstream 319632 16974305 ~ 16985139 (-)
dlx2a dlx2,LOC102799862 coding upstream 60175 17384763 ~ 17386999 (-)
nup62l nup62,LOC104948257 coding upstream 97279 17421867 ~ 17424329 (-)
ppp1r9ala NA coding upstream 108002 17432590 ~ 17458368 (-)
sp3a sp3 coding upstream 242829 17567417 ~ 17575561 (-)
LOC120569548 ola1,LOC100700376 coding upstream 256882 17581470 ~ 17629519 (-)
G124695 NA non-coding downstream 10131 17291927 ~ 17294640 (-)
G124693 NA non-coding downstream 14333 17287949 ~ 17290438 (-)
G124679 NA non-coding downstream 74655 17227899 ~ 17230116 (-)
G124612 myo3b non-coding downstream 124673 17176156 ~ 17180098 (-)
G124606 NA non-coding downstream 177227 17124881 ~ 17127544 (-)
G124691 NA non-coding upstream 23323 17347911 ~ 17350746 (-)
LOC120569506 NA non-coding upstream 412696 17737284 ~ 17822487 (-)
G124872 NA non-coding upstream 697821 18022409 ~ 18023477 (-)
G125000 NA non-coding upstream 767739 18092327 ~ 18092530 (-)
LOC120569840 NA non-coding upstream 884150 18208738 ~ 18211956 (-)
fastkd1 fastkd1,LOC102780871 other downstream 262399 17035373 ~ 17042372 (-)
LOC120570068 LOC103362129,LOC101485094 other downstream 914877 16381250 ~ 16389894 (-)
gcgb gcg other downstream 924006 16378488 ~ 16380765 (-)
LOC120570587 LOC100705152,LOC102292123,LOC101476258 other downstream 1082035 16207690 ~ 16222736 (-)
G124303 dapl1 other downstream 1203178 16099278 ~ 16101593 (-)
LOC120569287 LOC103391581,LOC104924425,LOC103375901 other upstream 788522 18113110 ~ 18115097 (-)
prkra prkra other upstream 832144 18156732 ~ 18163749 (-)
G125089 dct,LOC102781940 other upstream 1370892 18695480 ~ 18699802 (-)
G125090 NA other upstream 1376299 18700887 ~ 18704677 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other upstream 1907399 19231987 ~ 19258846 (-)

Expression


Co-expression Network