adarb1b (adarb1,LOC101485294,LOC102308976,LOC100709054)


Basic Information

Item Value
gene id adarb1b
gene name adarb1,LOC101485294,LOC102308976,LOC100709054
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 8442118 ~ 8582576 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817905.1
TGCGTTTGCTCCAGGTTAGTCTAGTCGCTGTCAGAAAGCTGTTTAGCTGATTTTGTAATAACAGTCTAAGTGCTGACCAAGCCATGGCCCTTCTTACCAACGGCGCGCAGAATCTGGGCTCCTATTACTGCCTGATCCGACGCAGGTTCAAGAGGAGGCGCAAGAAGCGCTCGGAACGCAAAGGTGCAGTGGGGGCAACTCTGCTCTCAGGTCAGAACAAACCTGTGGCCATGGATgtggatgaggaggagaatATGAGTTCAAGCAGCACAGATGTTAAGGAAAACCGAAACCTGGACAACGTGTCCTGCAAAGACGGGGTGGGAGTGGCTGAACAGCTCCCCAATGGAAGTGGCCTGGGCAGTCGAAAGCGCCCCCTGGAAGAGGGGAACAATGGACATACACACTCCAAGTTCCGGGCCAAGAAGCGCAAGAAAACCCCGGGGCCGGTCCTGCCCAAGAATGCTCTGATGCAGTTGAACGAAATCAAACCGGGTCTACAGTACAAATTGCTGTCTCAGACAGGACCAGTCCATGCtccagtttttgtcatgactgtGGAGGTCAATGGACAGATGTTTGAGGGCATGGGCCCAACTAAGAAGAAGGCTAAGCTAAATGCAGCTGAGAAAGCACTGCGTTCCTTCGTCCAGTTCCCCAATGCCTCTGAGGCACACCTGGCCATGGGTCGAACACTGACAGTGAACACAGACTTTACATCTGACCAAGCTGACTTCCCAGACATGCTCTTCAATGGCTTCGAGACACCAGCCGCACCTGAAGAATCCTTCTATCTAGGCTCTAATGGTAGCAGCTCCTTAAACTTACTAGGGGAGTATCCCCTGCCCACACCACCTGGCAGCAACCTTGTCCAGGCCCCATTGCCCCCTCCATCGACATTCAGCTCGCCCTCCAGTGGCAAAAACCCAGTCATGATCCTCAATGAGCTCAGGCCAGGCCTCAAATATGACTTTGTCTCAGAGAGCGGGGAGAGTCATGCCAAGAATTTTGTGATGTCAGTAACGGTGGATGCACAGACGTTTGAAGGCTCAGGGCGCAACAAGAAGCTGGCTAAAGCCCGGGCAGCGCAGGCCGCCCTCTCGGCTCTCTTCAACATGCAGCTAGACCAGACTCCATCCCGGCAACCCATACCAAGAGAGGGATTGCAGCTTCACCTACCCCAGGTTCTGGCTGATGCAGTCTCTCGCCTGGTGGTGGATAAGTTCAGTGAGCTGACAGAAAACTTCACCTCCCCCCATGCACGGCGAAAAGTCCTAGCAGGGGTCGTCATGACAACAGGGACAGATGTGAAGGAAGCACAGGTAATATGTGTCTCCACGGGAACCAAATGCATCAACGGTGAGTACATGAGCGACCGCGGCCTGGCACTCAATGACTGCCACGCTGAGATAATCGCCCGACGCTCGCTCATCAGGTACCTCTACACTCAGCTGGAGCTCTTCCTCAGCAAGGAGGACCAGCAGAAGTCCATATTCATGCAGTGTGACAAGGGAGGCTACCGGTTAAAGGAAAACGTTCAGTTCCACCTCTACATAAGCACCTCGCCCTGTGGAGACGCCAGGATCTTCTCTCCACACGAGGCCGGAGTTGAAGACCAAGGAGACAGACATCCAAACCGGAAAGCACGGGGCCAGTTAAGGACCAAAATAGAGTCAGGAGAGGGCACCATCCCTGTGAGGTCCAGTAACACCATCCAGACCTGGGACGGGGTGCTGCAGGGGGAGAGGTTACTCACCATGTCCTGCAGTGACAAGATCGCAAGGTGGAATGTGGTAGGCATCCAGGGCTCTTTGATGAGCTACTTCACAGAGCCAATCTACTTCTCCAGCATCATCCTTGGCAGCCTTTACCATGGCGACCACCTCTCCAGGGCCATGTACCAGCGCATCGCCGATATCGAGGACCTGCCCCAGCAGTTCACCCTCAACAGGCCTCTTCTCAGTGGTATAAGTAATGCAGAGGCCAGGCAGCCGGGCAAGGCGCCCAACTTCAGTGTGAACTGGACGGTGGGGGATCAGGTCCTGGAGGTGATCAATGCAACCACAGGCAAGGACGACATGGGTCGCGCTTCACGTCTCTGCAAGCACGCCCTCTACAGCCGCTGGGTGCGCCTGCACTCCAAGCTGTCATCCATCTTGTGGATCAAAGTGCTCAAGCCCAGCTCTTACCATGAAGCCAAGCAGGCCGCCACGGAGTACCACTCTGCCAAGCAGGCGCTCATCAAGGCCTTCCACAAGGCCGGCCTGGGGGCCTGGGTCAAAAAGCCCATTGAGCAAGACCAGTTCACCCTCTGCTCCTGAGGGAGTCAAGGGACCAAAGGGATTCCtgaaccccccaccccaccctcccACTCCACCACCActcctcccaccccccaccccctgacccaggGCTGAAAGCAAGAGAGCCCCCTATTAACAACCAGCCCACAGAGACACTTACCTCCGTCCCGTGTGTAGGCGCGCACGTGCACTTGTACTCGTGGAAACAAACGTTCGTAGTTTCACAAACCGTTCATAGCTCATCATTCTTATTCCTCAGTGGACCTCAGCCTCACCATGTCTTTTCTCATAATATTGATTTTTGtccattttgaatttgattttAATGGATGTTTTAAtggtggatttttatttttcatcttacttgttttctgttttaaaactggaatccatgtttttttaatgccaTTGATGTGGAAGTTAAAATTATGCAGTTGTGTCTATTTTCTGGATCAACGAGTGTAGCCAGTTTAGTGTGAAATGTAGCCGAGAAAACACACAATCTTCGTTAACTAAAACCAATGTGTATGGACCTGGAAAAAAACCAATCTACTTGCTAAAATGAATGACTTTTGACGAACTTTAATTTAAAGATGCATAAATCTTCAGGATGTAAATCTagtgctgaaaaaaaagaaagagaaccTAAAATAGTTATATAACTTTTAGTGTGTGTTACTTGGTCCGTTCCTTAGATGAGACTACATGTTCTTAGACCCTGTATTAAAGATGAAAAATGTTCCAAAAA
>XM_039817906.1
AGACGAAGAAGAGTGCCGACAGCAGTCTGTGGACACTGCAGTACATGCGACCGTACAACAAACCGCTCTCAGTCTCTGCTCGTTTTTTCTCCAACGCCAGCGACGACACGGATGAAAACAGTCTTCTGTGTTTTGCGAAGTGAAGCGGCGGAGAAGATTCCAACGTATCCGGAGACCTTAACTTTCCGTTACAGCACGAACCGTGCAGTGGGGGCAACTCTGCTCTCAGGTCAGAACAAACCTGTGGCCATGGATgtggatgaggaggagaatATGAGTTCAAGCAGCACAGATGTTAAGGAAAACCGAAACCTGGACAACGTGTCCTGCAAAGACGGGGTGGGAGTGGCTGAACAGCTCCCCAATGGAAGTGGCCTGGGCAGTCGAAAGCGCCCCCTGGAAGAGGGGAACAATGGACATACACACTCCAAGTTCCGGGCCAAGAAGCGCAAGAAAACCCCGGGGCCGGTCCTGCCCAAGAATGCTCTGATGCAGTTGAACGAAATCAAACCGGGTCTACAGTACAAATTGCTGTCTCAGACAGGACCAGTCCATGCtccagtttttgtcatgactgtGGAGGTCAATGGACAGATGTTTGAGGGCATGGGCCCAACTAAGAAGAAGGCTAAGCTAAATGCAGCTGAGAAAGCACTGCGTTCCTTCGTCCAGTTCCCCAATGCCTCTGAGGCACACCTGGCCATGGGTCGAACACTGACAGTGAACACAGACTTTACATCTGACCAAGCTGACTTCCCAGACATGCTCTTCAATGGCTTCGAGACACCAGCCGCACCTGAAGAATCCTTCTATCTAGGCTCTAATGGTAGCAGCTCCTTAAACTTACTAGGGGAGTATCCCCTGCCCACACCACCTGGCAGCAACCTTGTCCAGGCCCCATTGCCCCCTCCATCGACATTCAGCTCGCCCTCCAGTGGCAAAAACCCAGTCATGATCCTCAATGAGCTCAGGCCAGGCCTCAAATATGACTTTGTCTCAGAGAGCGGGGAGAGTCATGCCAAGAATTTTGTGATGTCAGTAACGGTGGATGCACAGACGTTTGAAGGCTCAGGGCGCAACAAGAAGCTGGCTAAAGCCCGGGCAGCGCAGGCCGCCCTCTCGGCTCTCTTCAACATGCAGCTAGACCAGACTCCATCCCGGCAACCCATACCAAGAGAGGGATTGCAGCTTCACCTACCCCAGGTTCTGGCTGATGCAGTCTCTCGCCTGGTGGTGGATAAGTTCAGTGAGCTGACAGAAAACTTCACCTCCCCCCATGCACGGCGAAAAGTCCTAGCAGGGGTCGTCATGACAACAGGGACAGATGTGAAGGAAGCACAGGTAATATGTGTCTCCACGGGAACCAAATGCATCAACGGTGAGTACATGAGCGACCGCGGCCTGGCACTCAATGACTGCCACGCTGAGATAATCGCCCGACGCTCGCTCATCAGGTACCTCTACACTCAGCTGGAGCTCTTCCTCAGCAAGGAGGACCAGCAGAAGTCCATATTCATGCAGTGTGACAAGGGAGGCTACCGGTTAAAGGAAAACGTTCAGTTCCACCTCTACATAAGCACCTCGCCCTGTGGAGACGCCAGGATCTTCTCTCCACACGAGGCCGGAGTTGAAGACCAAGGAGACAGACATCCAAACCGGAAAGCACGGGGCCAGTTAAGGACCAAAATAGAGTCAGGAGAGGGCACCATCCCTGTGAGGTCCAGTAACACCATCCAGACCTGGGACGGGGTGCTGCAGGGGGAGAGGTTACTCACCATGTCCTGCAGTGACAAGATCGCAAGGTGGAATGTGGTAGGCATCCAGGGCTCTTTGATGAGCTACTTCACAGAGCCAATCTACTTCTCCAGCATCATCCTTGGCAGCCTTTACCATGGCGACCACCTCTCCAGGGCCATGTACCAGCGCATCGCCGATATCGAGGACCTGCCCCAGCAGTTCACCCTCAACAGGCCTCTTCTCAGTGGTATAAGTAATGCAGAGGCCAGGCAGCCGGGCAAGGCGCCCAACTTCAGTGTGAACTGGACGGTGGGGGATCAGGTCCTGGAGGTGATCAATGCAACCACAGGCAAGGACGACATGGGTCGCGCTTCACGTCTCTGCAAGCACGCCCTCTACAGCCGCTGGGTGCGCCTGCACTCCAAGCTGTCATCCATCTTGTGGATCAAAGTGCTCAAGCCCAGCTCTTACCATGAAGCCAAGCAGGCCGCCACGGAGTACCACTCTGCCAAGCAGGCGCTCATCAAGGCCTTCCACAAGGCCGGCCTGGGGGCCTGGGTCAAAAAGCCCATTGAGCAAGACCAGTTCACCCTCTGCTCCTGAGGGAGTCAAGGGACCAAAGGGATTCCtgaaccccccaccccaccctcccACTCCACCACCActcctcccaccccccaccccctgacccaggGCTGAAAGCAAGAGAGCCCCCTATTAACAACCAGCCCACAGAGACACTTACCTCCGTCCCGTGTGTAGGCGCGCACGTGCACTTGTACTCGTGGAAACAAACGTTCGTAGTTTCACAAACCGTTCATAGCTCATCATTCTTATTCCTCAGTGGACCTCAGCCTCACCATGTCTTTTCTCATAATATTGATTTTTGtccattttgaatttgattttAATGGATGTTTTAAtggtggatttttatttttcatcttacttgttttctgttttaaaactggaatccatgtttttttaatgccaTTGATGTGGAAGTTAAAATTATGCAGTTGTGTCTATTTTCTGGATCAACGAGTGTAGCCAGTTTAGTGTGAAATGTAGCCGAGAAAACACACAATCTTCGTTAACTAAAACCAATGTGTATGGACCTGGAAAAAAACCAATCTACTTGCTAAAATGAATGACTTTTGACGAACTTTAATTTAAAGATGCATAAATCTTCAGGATGTAAATCTagtgctgaaaaaaaagaaagagaaccTAAAATAGTTATATAACTTTTAGTGTGTGTTACTTGGTCCGTTCCTTAGATGAGACTACATGTTCTTAGACCCTGTATTAAAGATGAAAAATGTTCCAAAAA
>XM_039817907.1
ACAACAAACCGCTCTCAGTCTCTGCTCGTTTTTTCTCCAACGCCAGCGACGACACGGATGAAAACAGTCTTCTGTGTTTTGCGAAGTGAAGCGGCGGAGAAGATTCCAACGTATCCGGAGACCTTAACTTTCCGTTACAGCACGAACCGCGCAGCGTGCGGCCTTTGGGGATTCTAAAGGATTGGCAAATAAAACACCTTTCCCCCTCGACTACTCAGTGGAACGGTGCAGTGGGGGCAACTCTGCTCTCAGGTCAGAACAAACCTGTGGCCATGGATgtggatgaggaggagaatATGAGTTCAAGCAGCACAGATGTTAAGGAAAACCGAAACCTGGACAACGTGTCCTGCAAAGACGGGGTGGGAGTGGCTGAACAGCTCCCCAATGGAAGTGGCCTGGGCAGTCGAAAGCGCCCCCTGGAAGAGGGGAACAATGGACATACACACTCCAAGTTCCGGGCCAAGAAGCGCAAGAAAACCCCGGGGCCGGTCCTGCCCAAGAATGCTCTGATGCAGTTGAACGAAATCAAACCGGGTCTACAGTACAAATTGCTGTCTCAGACAGGACCAGTCCATGCtccagtttttgtcatgactgtGGAGGTCAATGGACAGATGTTTGAGGGCATGGGCCCAACTAAGAAGAAGGCTAAGCTAAATGCAGCTGAGAAAGCACTGCGTTCCTTCGTCCAGTTCCCCAATGCCTCTGAGGCACACCTGGCCATGGGTCGAACACTGACAGTGAACACAGACTTTACATCTGACCAAGCTGACTTCCCAGACATGCTCTTCAATGGCTTCGAGACACCAGCCGCACCTGAAGAATCCTTCTATCTAGGCTCTAATGGTAGCAGCTCCTTAAACTTACTAGGGGAGTATCCCCTGCCCACACCACCTGGCAGCAACCTTGTCCAGGCCCCATTGCCCCCTCCATCGACATTCAGCTCGCCCTCCAGTGGCAAAAACCCAGTCATGATCCTCAATGAGCTCAGGCCAGGCCTCAAATATGACTTTGTCTCAGAGAGCGGGGAGAGTCATGCCAAGAATTTTGTGATGTCAGTAACGGTGGATGCACAGACGTTTGAAGGCTCAGGGCGCAACAAGAAGCTGGCTAAAGCCCGGGCAGCGCAGGCCGCCCTCTCGGCTCTCTTCAACATGCAGCTAGACCAGACTCCATCCCGGCAACCCATACCAAGAGAGGGATTGCAGCTTCACCTACCCCAGGTTCTGGCTGATGCAGTCTCTCGCCTGGTGGTGGATAAGTTCAGTGAGCTGACAGAAAACTTCACCTCCCCCCATGCACGGCGAAAAGTCCTAGCAGGGGTCGTCATGACAACAGGGACAGATGTGAAGGAAGCACAGGTAATATGTGTCTCCACGGGAACCAAATGCATCAACGGTGAGTACATGAGCGACCGCGGCCTGGCACTCAATGACTGCCACGCTGAGATAATCGCCCGACGCTCGCTCATCAGGTACCTCTACACTCAGCTGGAGCTCTTCCTCAGCAAGGAGGACCAGCAGAAGTCCATATTCATGCAGTGTGACAAGGGAGGCTACCGGTTAAAGGAAAACGTTCAGTTCCACCTCTACATAAGCACCTCGCCCTGTGGAGACGCCAGGATCTTCTCTCCACACGAGGCCGGAGTTGAAGACCAAGGAGACAGACATCCAAACCGGAAAGCACGGGGCCAGTTAAGGACCAAAATAGAGTCAGGAGAGGGCACCATCCCTGTGAGGTCCAGTAACACCATCCAGACCTGGGACGGGGTGCTGCAGGGGGAGAGGTTACTCACCATGTCCTGCAGTGACAAGATCGCAAGGTGGAATGTGGTAGGCATCCAGGGCTCTTTGATGAGCTACTTCACAGAGCCAATCTACTTCTCCAGCATCATCCTTGGCAGCCTTTACCATGGCGACCACCTCTCCAGGGCCATGTACCAGCGCATCGCCGATATCGAGGACCTGCCCCAGCAGTTCACCCTCAACAGGCCTCTTCTCAGTGGTATAAGTAATGCAGAGGCCAGGCAGCCGGGCAAGGCGCCCAACTTCAGTGTGAACTGGACGGTGGGGGATCAGGTCCTGGAGGTGATCAATGCAACCACAGGCAAGGACGACATGGGTCGCGCTTCACGTCTCTGCAAGCACGCCCTCTACAGCCGCTGGGTGCGCCTGCACTCCAAGCTGTCATCCATCTTGTGGATCAAAGTGCTCAAGCCCAGCTCTTACCATGAAGCCAAGCAGGCCGCCACGGAGTACCACTCTGCCAAGCAGGCGCTCATCAAGGCCTTCCACAAGGCCGGCCTGGGGGCCTGGGTCAAAAAGCCCATTGAGCAAGACCAGTTCACCCTCTGCTCCTGAGGGAGTCAAGGGACCAAAGGGATTCCtgaaccccccaccccaccctcccACTCCACCACCActcctcccaccccccaccccctgacccaggGCTGAAAGCAAGAGAGCCCCCTATTAACAACCAGCCCACAGAGACACTTACCTCCGTCCCGTGTGTAGGCGCGCACGTGCACTTGTACTCGTGGAAACAAACGTTCGTAGTTTCACAAACCGTTCATAGCTCATCATTCTTATTCCTCAGTGGACCTCAGCCTCACCATGTCTTTTCTCATAATATTGATTTTTGtccattttgaatttgattttAATGGATGTTTTAAtggtggatttttatttttcatcttacttgttttctgttttaaaactggaatccatgtttttttaatgccaTTGATGTGGAAGTTAAAATTATGCAGTTGTGTCTATTTTCTGGATCAACGAGTGTAGCCAGTTTAGTGTGAAATGTAGCCGAGAAAACACACAATCTTCGTTAACTAAAACCAATGTGTATGGACCTGGAAAAAAACCAATCTACTTGCTAAAATGAATGACTTTTGACGAACTTTAATTTAAAGATGCATAAATCTTCAGGATGTAAATCTagtgctgaaaaaaaagaaagagaaccTAAAATAGTTATATAACTTTTAGTGTGTGTTACTTGGTCCGTTCCTTAGATGAGACTACATGTTCTTAGACCCTGTATTAAAGATGAAAAATGTTCCAAAAA

Function

symbol description
adarb1 Enables double-stranded RNA adenosine deaminase activity; double-stranded RNA binding activity; and identical protein binding activity. Involved in several processes, including RNA metabolic process; negative regulation of protein kinase activity by regulation of protein phosphorylation; and positive regulation of viral genome replication. Located in cytosol; nucleolus; and nucleoplasm. Biomarker of amyotrophic lateral sclerosis.

NR:

description
double-stranded RNA-specific editase 1-like isoform X2

GO:

id name namespace
GO:0006396 RNA processing biological_process
GO:0004000 adenosine deaminase activity molecular_function
GO:0003723 RNA binding molecular_function

KEGG:

id description
K13194 ADARB; double stranded RNA-specific editase B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817905.1 False 3051 mRNA 0.51 10 8442118 8491475
XM_039817906.1 False 3070 mRNA 0.51 10 8442118 8582576
XM_039817907.1 True 3093 mRNA 0.51 11 8442118 8582522

Neighbor

gene id symbol gene type direction distance location
asb1 asb1,LOC102790951 coding downstream 44593 8387273 ~ 8397525 (-)
LOC120570227 LOC104955246 coding downstream 97766 8341303 ~ 8344352 (-)
twist2 twist2,LOC103376110 coding downstream 111636 8327026 ~ 8330482 (-)
LOC120569509 lct coding downstream 299636 8130816 ~ 8142482 (-)
cxcr2 NA coding downstream 349892 8088571 ~ 8092226 (-)
LOC120570417 NA coding upstream 2004 8584580 ~ 8585518 (-)
ramp1 ramp1,LOC100698743,LOC101467429,LOC102789017 coding upstream 118993 8701569 ~ 8771922 (-)
acmsd acmsd coding upstream 221799 8804375 ~ 8810586 (-)
LOC120569317 NA coding upstream 305287 8887863 ~ 8901784 (-)
pth2ra pth2r coding upstream 451336 9033912 ~ 9122327 (-)
G122820 NA non-coding downstream 59997 8381886 ~ 8382121 (-)
G122814 NA non-coding downstream 125392 8314022 ~ 8316726 (-)
G122802 NA non-coding downstream 249931 8191924 ~ 8192187 (-)
G122677 NA non-coding downstream 528800 7828932 ~ 7913318 (-)
G122660 NA non-coding downstream 818075 7623422 ~ 7624043 (-)
G122830 NA non-coding upstream 21950 8604526 ~ 8612694 (-)
G122838 NA non-coding upstream 65281 8647857 ~ 8723582 (-)
G122858 map3k19 non-coding upstream 207741 8790317 ~ 8790556 (-)
G122859 map3k19,LOC104941527 non-coding upstream 208088 8790664 ~ 8790898 (-)
G122863 NA non-coding upstream 298867 8881443 ~ 8885620 (-)
tmeff2a tmeff2 other downstream 1124486 7181931 ~ 7317632 (-)
pcbp3 pcbp3,LOC100710924,LOC107660579,LOC103138153 other downstream 1570906 6782446 ~ 6871212 (-)
LOC120569614 NA other downstream 1760124 6640881 ~ 6681994 (-)
G122404 NA other downstream 2427923 6012040 ~ 6014195 (-)
glsb gls,LOC100711430,LOC102197968,LOC101482051 other downstream 3469507 4917659 ~ 4972611 (-)
ccnt2a ccnt2,ccnt2a,LOC104923135,LOC102200362 other upstream 211045 8793621 ~ 8803104 (-)
G122878 NA other upstream 416886 8999462 ~ 9000123 (-)
stxbp5l stxbp5l other upstream 2357477 10940053 ~ 11094619 (-)
thsd7ba NA other upstream 2698034 11280610 ~ 11467939 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other upstream 3649844 12232420 ~ 12245005 (-)

Expression


Co-expression Network