si:ch211-214p13.3


Basic Information

Item Value
gene id si:ch211-214p13.3
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 19751701 ~ 19768586 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817911.1
CACGCCCAGGCACGGGACGGGAGAGCAGAGCATCAACCATCCCCGAGCAGCTGCAGGGATATATGGATGTTTTGTAAGAGGAAAACTCGATCAATGGAATGGATGGATGCTTCTTTGTTCAACCATGGACACCGTGTTTCTCCAGAAGCAACACTATACTTTTATTGGCATTTACGTTGATTCTGAGCACAGTTATAGAAGCTCTGCAGGTGATTGGAGGGAACGTAACCGTTGTGCAAGGAGGGACCGCTATCTTATCCTGCAAACTCATCGACACCACGGAGACCCTATCCCAGATTTCATGGCAGAAGATTACCAGAGGAAATCCTGTGAACGTTAATTTCTTTGTCGTCTCGGAAGTAGATGGACCACAATTTGTCAATGGAGCTGATGATCGATTTAAATTTATTGGGAGCTTTGAAGAACACCTTGCATCTCTGCAGTTATCCAATGTCACATTAAGGGATGAAGGCACCTACATGTGTATCTTCACTTTGTTCCCCAGCGGAAATCACAAGACAGACATACCTCTAAACGTGCTTGTGCCTCCGGTCTCAAGCCTGGAGGATAATCATCCTACTTTGGGAAATGAAGAGGTTTCCCTCGTCACTTGCATAGCTGCTGGTTCCAAGCCTCCTGCAGAGGTGAGGTGGCTCATGGATACTCTGGCAGAAACAGTGAGGGAAACCACCAGCTTCACCCACCATGCCAACGGTACGACTACCACAACCAGCTCGCTTTTTGGAGTAGCTTCCAAAGAAATCAAGGATCATTTGGTCCAGTGTGTCGTCACCAGTAAAGCCACGTCAAAAGAAGAAATCCTGTACTTCAACATACAGGTCTACTTCCCACCCACTGAAGTGAGGATCAGTGACAGCTCTGAAGGCTCATTTGAATGTGTGACTGAAGCCAACCCAAAGGCAGACTTTACCTGGACCAGAGTTGGGCAGGCATGGCCTCAGTCTGCTGTCAGAGATGGTGCAACACTACGGTTTCAGAAAATGACCTCTGACCTCAATGGCCTCTACCAGTGTGAAGCAAGTAACCCTTATGGAAAAAAACATAGTCCCCTCTATGTGCATGTGGCTTCAGATGCCGGCATTGCTTGTTGGATCTTATTTGGTCTTTTGCTGATTGCCGTTGTTGCCGTTGTTGTTGCTTCGGTAGTTTGGTACTTTTACAAATCTGGGAGATTTACAAGGTTAATAGGTAATTCATTATCCAGGACAAGAGAGGACACACGTGGGGAGAGGACAATGGTCCCAACAACTTCCAACTCACCTGAAGGGCCTCTAAGAGTAGAAGAGGAAGCAGCAGAGGGATCTCTTTGACATGCATGGCAGCAACAAGCTGGACGACCGTTGGACTGCAGCTGGCTTACACACCCCGTGGCTAACGTGTCATTCCTCACTCAGCTGGTTAGTCAACAGTATAGGGTAATGTGTACTGCTAATAGCATTAACAATAATACTATAAAATGCTGTACAATAGAAGCAACAAAATGGTGAATGAAGTTTTCAAGCAAAACTGGAACCATCAAATGAATGAAAGAGAACGTTTTATTAACTGTCTAACACAGTCAGTGCCAACAACATTATCTATGTAGGATGTGGCTTGTGACTGTTTGCTTTATCATTAACAGCCACAGTGTAATTCTGTTTAACCACCAACAGCATTAACGGTTGATAAAAGCAGAGGACTATGAAGCATGTTTGCATACACACAATAAACTTCGTTACTGGCCAAGAAATTATTCATGAGAAATTTGAATAGAAAACTTGAGAATAAGCAATGAAAGCCTAAAAAACACACTTAAACTCAAGAGAAAAACTGCAACTTGACAAAATGCAGACAAATTAAAAAGCATTCTCCAACACATTTTTCTCCATTTGCTCAGGTTTTTATAATATATTCAAGCATTTGGAGAAATGGAGAAACACTGTTTTTCTATGAAAGTCTGTTAAGTGCAAATTATtactttggttgttttatttattatttatttgaatgttACCACCAGATTCATCTTCAACAAGGTTTCCATGTTATGtttcttttcatattttttagCTTTTATTCTATATTTCTCAAGTGTCATTCCGATTTCTCAGTTTTCCATTACATTTCGTCCTTGAATTATTTCATGAATTATTTCCTGACTGAAAATATATACAGTTGaaatcagatatttacatacacttaaaaaaaaaacacaaaaacatttatttctttactgtcatacattaaatca
>XM_039817912.1
ACGCCCAGGCACGGGACGGGAGAGCAGAGCATCAACCATCCCCGAGCAGCTGCAGGGATATATGGATGTTTTGTAAGAGGAAAACTCGATCAATGGAATGGATGGATGCTTCTTTGTTCAACCATGGACACCGTGTTTCTCCAGAAGCAACACTATACTTTTATTGGCATTTACGTTGATTCTGAGCACAGTTATAGAAGCTCTGCAGGTGATTGGAGGGAACGTAACCGTTGTGCAAGGAGGGACCGCTATCTTATCCTGCAAACTCATCGACACCACGGAGACCCTATCCCAGATTTCATGGCAGAAGATTACCAGAGGAAATCCTGTGAACGTTAATTTCTTTGTCGTCTCGGAAGTAGATGGACCACAATTTGTCAATGGAGCTGATGATCGATTTAAATTTATTGGGAGCTTTGAAGAACACCTTGCATCTCTGCAGTTATCCAATGTCACATTAAGGGATGAAGGCACCTACATGTGTATCTTCACTTTGTTCCCCAGCGGAAATCACAAGACAGACATACCTCTAAACGTGCTTGTGCCTCCGGTCTCAAGCCTGGAGGATAATCATCCTACTTTGGGAAATGAAGAGGTTTCCCTCGTCACTTGCATAGCTGCTGGTTCCAAGCCTCCTGCAGAGGTGAGGTGGCTCATGGATACTCTGGCAGAAACAGTGAGGGAAACCACCAGCTTCACCCACCATGCCAACGGTACGACTACCACAACCAGCTCGCTTTTTGGAGTAGCTTCCAAAGAAATCAAGGATCATTTGGTCCAGTGTGTCGTCACCAGTAAAGCCACGTCAAAAGAAGAAATCCTGTACTTCAACATACAGGTCTACTTCCCACCCACTGAAGTGAGGATCAGTGACAGCTCTGAAGGCTCATTTGAATGTGTGACTGAAGCCAACCCAAAGGCAGACTTTACCTGGACCAGAGTTGGGCAGGCATGGCCTCAGTCTGCTGTCAGAGATGGTGCAACACTACGGTTTCAGAAAATGACCTCTGACCTCAATGGCCTCTACCAGTGTGAAGCAAGTAACCCTTATGGAAAAAAACATAGTCCCCTCTATGTGCATGTGGCTTCAGATGCCGGCATTGCTTGTTGGATCTTATTTGGTCTTTTGCTGATTGCCGTTGTTGCCGTTGTTGTTGCTTCGGTAGTTTGGTACTTTTACAAATCTGGGAGATTTACAAGGACAAGAGAGGACACACGTGGGGAGAGGACAATGGTCCCAACAACTTCCAACTCACCTGAAGGGCCTCTAAGAGTAGAAGAGGAAGCAGCAGAGGGATCTCTTTGACATGCATGGCAGCAACAAGCTGGACGACCGTTGGACTGCAGCTGGCTTACACACCCCGTGGCTAACGTGTCATTCCTCACTCAGCTGGTTAGTCAACAGTATAGGGTAATGTGTACTGCTAATAGCATTAACAATAATACTATAAAATGCTGTACAATAGAAGCAACAAAATGGTGAATGAAGTTTTCAAGCAAAACTGGAACCATCAAATGAATGAAAGAGAACGTTTTATTAACTGTCTAACACAGTCAGTGCCAACAACATTATCTATGTAGGATGTGGCTTGTGACTGTTTGCTTTATCATTAACAGCCACAGTGTAATTCTGTTTAACCACCAACAGCATTAACGGTTGATAAAAGCAGAGGACTATGAAGCATGTTTGCATACACACAATAAACTTCGTTACTGGCCAAGAAATTATTCATGAGAAATTTGAATAGAAAACTTGAGAATAAGCAATGAAAGCCTAAAAAACACACTTAAACTCAAGAGAAAAACTGCAACTTGACAAAATGCAGACAAATTAAAAAGCATTCTCCAACACATTTTTCTCCATTTGCTCAGGTTTTTATAATATATTCAAGCATTTGGAGAAATGGAGAAACACTGTTTTTCTATGAAAGTCTGTTAAGTGCAAATTATtactttggttgttttatttattatttatttgaatgttACCACCAGATTCATCTTCAACAAGGTTTCCATGTTATGtttcttttcatattttttagCTTTTATTCTATATTTCTCAAGTGTCATTCCGATTTCTCAGTTTTCCATTACATTTCGTCCTTGAATTATTTCATGAATTATTTCCTGACTGAAAATATATACAGTTGaaatcagatatttacatacacttaaaaaaaaaacacaaaaacatttatttctttactgtcatacattaaatca
>XR_005640980.1
CACGCCCAGGCACGGGACGGGAGAGCAGAGCATCAACCATCCCCGAGCAGCTGCAGGGATATATGGATGTTTTGTAAGAGGAAAACTCGATCAATGGAATGGATGGATGCTTCTTTGTTCAACCATGGACACCGTGTTTCTCCAGAAGCAACACTATACTTTTATTGGCATTTACGTTGATTCTGAGCACAGTTATAGAAGCTCTGCAGGTGATTGGAGGGAACGTAACCGTTGTGCAAGGAGGGACCGCTATCTTATCCTGCAAACTCATCGACACCACGGAGACCCTATCCCAGATTTCATGGCAGAAGATTACCAGAGGAAATCCTGTGAACGTTAATTTCTTTGTCGTCTCGGAAGTAGATGGACCACAATTTGTCAATGGAGCTGATGATCGATTTAAATTTATTGGGAGCTTTGAAGAACACCTTGCATCTCTGCAGTTATCCAATGTCACATTAAGGGATGAAGGCACCTACATGTGTATCTTCACTTTGTTCCCCAGCGGAAATCACAAGACAGACATACCTCTAAACGTGCTTGTGCCTCCGGTCTCAAGCCTGGAGGATAATCATCCTACTTTGGGAAATGAAGAGGTTTCCCTCGTCACTTGCATAGCTGCTGGTTCCAAGCCTCCTGCAGAGGTGAGGTGGCTCATGGATACTCTGGCAGAAACAGTGAGGGAAACCACCAGCTTCACCCACCATGCCAACGGTACGACTACCACAACCAGCTCGCTTTTTGGAGTAGCTTCCAAAGAAATCAAGGATCATTTGGTCCAGTGTGTCGTCACCAGTAAAGCCACGTCAAAAGAAGAAATCCTGTACTTCAACATACAGGTCTACTTCCCACCCACTGAAGTGAGGATCAGTGACAGCTCTGAAGGCTCATTTGAATGTGTGACTGAAGCCAACCCAAAGGCAGACTTTACCTGGACCAGAGTTGGGCAGGCATGGCCTCAGTCTGCTGTCAGAGATGGTGCAACACTACGGTTTCAGAAAATGACCTCTGACCTCAATGGCCTCTACCAGTGTGAAGCAAGTAACCCTTATGGAAAAAAACATAGTCCCCTCTATGTGCATGTGGCTTCAGTTTCCACCACTTTATAAAAACCCAGGACTCCTATCTGAGTTAAGGAGCTGAGACACAGCTCAGTCAAAAACGGAATAGGATAAGCTTTAAGATGCCGGCATTGCTTGTTGGATCTTATTTGGTCTTTTGCTGATTGCCGTTGTTGCCGTTGTTGTTGCTTCGGTAGTTTGGTACTTTTACAAATCTGGGAGATTTACAAGGT

Function

NR:

description
PREDICTED: nectin-3-like protein

GO: NA

KEGG:

id description
ko04138 Autophagy - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817911.1 True 2251 mRNA 0.41 8 19751701 19768586
XM_039817912.1 False 2226 mRNA 0.41 8 19751701 19768585
XR_005640980.1 False 1294 transcript 0.47 7 19753043 19768586

Neighbor

gene id symbol gene type direction distance location
gja5a gja5 coding downstream 35781 19704828 ~ 19715920 (-)
acp6 acp6 coding downstream 49682 19695451 ~ 19702019 (-)
LOC120570427 LOC103352913,LOC100708017,LOC104953986 coding downstream 176110 19570871 ~ 19575591 (-)
LOC120570428 kcne2 coding downstream 192182 19557510 ~ 19559519 (-)
casq2 LOC103352915,LOC101061703,LOC100712579,LOC102192454 coding downstream 195060 19551326 ~ 19556641 (-)
LOC120569249 NA coding upstream 2707 19771293 ~ 19774031 (-)
nr1i2 nr1i2 coding upstream 131656 19900242 ~ 19907077 (-)
cfap91 NA coding upstream 139908 19908494 ~ 19913720 (-)
zgc:113337 cd200,LOC103369899 coding upstream 165564 19934150 ~ 19943910 (-)
pdzk1 NA coding upstream 184644 19953230 ~ 19958864 (-)
G125411 NA non-coding downstream 20990 19730455 ~ 19730711 (-)
G125398 bcl9 non-coding downstream 70973 19678001 ~ 19680728 (-)
G125315 NA non-coding downstream 180894 19569610 ~ 19570807 (-)
G125311 LOC103352916,LOC105938264 non-coding downstream 201283 19547715 ~ 19550418 (-)
G125299 LOC103352919,LOC102305963 non-coding downstream 292456 19454417 ~ 19459245 (-)
LOC120569251 NA non-coding upstream 13507 19782093 ~ 19782621 (-)
LOC120569252 NA non-coding upstream 14142 19782728 ~ 19784773 (-)
G125434 fstl1 non-coding upstream 48653 19817239 ~ 19860237 (-)
G125432 NA non-coding upstream 55158 19823744 ~ 19824404 (-)
G125458 NA non-coding upstream 129081 19897667 ~ 19897930 (-)
G125326 dopey2 other downstream 154180 19595929 ~ 19597521 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other downstream 492855 19231987 ~ 19258846 (-)
G125090 NA other downstream 1047024 18700887 ~ 18704677 (-)
G125089 dct,LOC102781940 other downstream 1051899 18695480 ~ 18699802 (-)
prkra prkra other downstream 1587952 18156732 ~ 18163749 (-)
LOC120570223 NA other upstream 21466 19790052 ~ 19796220 (-)
si:ch211-214p13.7 NA other upstream 152682 19921268 ~ 19923735 (-)
G125619 col4a2 other upstream 690576 20459162 ~ 20461629 (-)
G125620 col4a2 other upstream 695523 20464109 ~ 20467185 (-)
LOC120570047 dynlt3 other upstream 965964 20734550 ~ 20738320 (-)

Expression


Co-expression Network