nepro


Basic Information

Item Value
gene id nepro
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 10921003 ~ 10925563 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818069.1
CTTCCGCATGTTTTTTGTAGGGAAGCATCATCCGTGGGAAGCATGGCAGGAGAACCGTGGAACAGGGTAAACATTGCTTTTCCCGGTGCGGTTTCTAGTGTCCGTGTACATTTCAGCTCAGCTACAGATGAACGTGTGAAAGCCCTGATTGTGGAAAATGACAAGGTGCTTAGGCTAATTCGGAGTGAGATTCTTCAAACCGAGGTACGAGTTCTCTACGAGCTGCTGTACTTCCTAAATAACAGCTTCAGAGGCAACAAGACGTTCAAAGGTTTAAAGCAGGTTGAACAATGCATAAACAGGCTGAAGAGCATGAAACTTGATTTTGCTCTTCAGGAGCTGACGGACCTGTGTCCCAAAAGAATTCAAAGaggacTGAGCATCAAGGCTGGTGAGTGTGATGTCCCCAGTCAACCCATGCTGGAGTGGCTCTGTCTCAAAGTGCTTGGAGCCGCCCAGCTGATGAGCTGCACATTGAATCGCTGCAGCAGAGCTTTCACACTGTCAATGCAGCAGATGAAATGGGAGGAGTTTATTATCTTGAATATGGTGATAACGAGCATGGTCAGTCGTCTCTGGGTGATTGCCCGTGGTATCCTGGTCAGCCTGTCCACTCTGTATCAGCAGCTCCTGGAGCTCCTGAGAGAAGTAGCCAACGCCCAGCCCATGCCCTTCCTCACAGACTTCTCCCTGCCGGCAGATATGGCTCAGTTCCTGGCTCCTTCTGATGCCCGTTTACTGACCAAAAAGCCAGCACGCGGTCCCCTTGCCAGAGGTCACAAGTATAAGCAGCAGGGGAAGAAGAAATCTTCTGTTAAAGTGAAGAACCAGGGAGAGGCAAGGGAGGTTAAAGAAGACCTGGGTGTTGCTGTTGAAAGAGttatTGGTCTTGACGCTGACATGAAGCCTTTTCTCAAGGTTTTCAGGGACTTCTCTGAGGGCAAATCCTtcccacagaaaacacacaaggcCGACAGGAAACGGAGGTTCAAGAAACAAGTGAGAGAGGCTACTACTTTCACAGACATGGCGGCCCATCTGGAAGAAATGATCCTGTGGTGCAAGTCCCAGAAGATGGCAAAGGAAAAACGTCTTCTAAGCTTCTTGCATTTAAAGTGCCAAAGGATGAAATGCTTAGAGGCAGCAGGTTACAACGTTCAGAGGAGGTTGCGGACCTTCAGACAGGAAGCTCGCTGGGCTTCATCTCCTCACGGCTCGGTGCCGACAACCTGCCGGGCTTCTGCTGCAACCAGGAGACATGCTCGCCTGACAACTCGTTGGCAGACGCTCAGAAGTCGATTTAAGTCTTCAACGGGTGTGAAAAAGAAACTGCTGAAGAGACAAAGTGGGAGGACGGAGTTATCAGTGTCCGGACTGTCAGGGGACGACCAAAGAACCCGGACTACAAACGAGGCGACATCATCTCAGACCACCGGCTGGGACCGCCAGGATGACATAGATGATATATTTGCCTCTGTAGGTTTGTGACACTTTGGAATTGAACACATCCAATGAAACAACTTACTGAATGTAGCTGAGCTCAGTATTTGATAGATTCCTCTGTTTTGAAAGGACATTTGATGTGTAATTATAACTGATGGTTGGTCattgtatgaatgaatgaattaatgaatgaagTGCTAAACAGCAGCAGTTAattttaaagcagaaagtaACCAAA
>XM_039818070.1
GTTTTTTGTAGGGAAGCATCATCCGTGGGAAGCATGGCAGGAGAACCGTGGAACAGGATGAACGTGTGAAAGCCCTGATTGTGGAAAATGACAAGGTGCTTAGGCTAATTCGGAGTGAGATTCTTCAAACCGAGGTACGAGTTCTCTACGAGCTGCTGTACTTCCTAAATAACAGCTTCAGAGGCAACAAGACGTTCAAAGGTTTAAAGCAGGTTGAACAATGCATAAACAGGCTGAAGAGCATGAAACTTGATTTTGCTCTTCAGGAGCTGACGGACCTGTGTCCCAAAAGAATTCAAAGaggacTGAGCATCAAGGCTGGTGAGTGTGATGTCCCCAGTCAACCCATGCTGGAGTGGCTCTGTCTCAAAGTGCTTGGAGCCGCCCAGCTGATGAGCTGCACATTGAATCGCTGCAGCAGAGCTTTCACACTGTCAATGCAGCAGATGAAATGGGAGGAGTTTATTATCTTGAATATGGTGATAACGAGCATGGTCAGTCGTCTCTGGGTGATTGCCCGTGGTATCCTGGTCAGCCTGTCCACTCTGTATCAGCAGCTCCTGGAGCTCCTGAGAGAAGTAGCCAACGCCCAGCCCATGCCCTTCCTCACAGACTTCTCCCTGCCGGCAGATATGGCTCAGTTCCTGGCTCCTTCTGATGCCCGTTTACTGACCAAAAAGCCAGCACGCGGTCCCCTTGCCAGAGGTCACAAGTATAAGCAGCAGGGGAAGAAGAAATCTTCTGTTAAAGTGAAGAACCAGGGAGAGGCAAGGGAGGTTAAAGAAGACCTGGGTGTTGCTGTTGAAAGAGttatTGGTCTTGACGCTGACATGAAGCCTTTTCTCAAGGTTTTCAGGGACTTCTCTGAGGGCAAATCCTtcccacagaaaacacacaaggcCGACAGGAAACGGAGGTTCAAGAAACAAGTGAGAGAGGCTACTACTTTCACAGACATGGCGGCCCATCTGGAAGAAATGATCCTGTGGTGCAAGTCCCAGAAGATGGCAAAGGAAAAACGTCTTCTAAGCTTCTTGCATTTAAAGTGCCAAAGGATGAAATGCTTAGAGGCAGCAGGTTACAACGTTCAGAGGAGGTTGCGGACCTTCAGACAGGAAGCTCGCTGGGCTTCATCTCCTCACGGCTCGGTGCCGACAACCTGCCGGGCTTCTGCTGCAACCAGGAGACATGCTCGCCTGACAACTCGTTGGCAGACGCTCAGAAGTCGATTTAAGTCTTCAACGGGTGTGAAAAAGAAACTGCTGAAGAGACAAAGTGGGAGGACGGAGTTATCAGTGTCCGGACTGTCAGGGGACGACCAAAGAACCCGGACTACAAACGAGGCGACATCATCTCAGACCACCGGCTGGGACCGCCAGGATGACATAGATGATATATTTGCCTCTGTAGGTTTGTGACACTTTGGAATTGAACACATCCAATGAAACAACTTACTGAATGTAGCTGAGCTCAGTATTTGATAGATTCCTCTGTTTTGAAAGGACATTTGATGTGTAATTATAACTGATGGTTGGTCattgtatgaatgaatgaattaatgaatgaagTGCTAAACAGCAGCAGTTAattttaaagcagaaagtaACCAAA

Function

NR:

description
nucleolus and neural progenitor protein

GO:

id name namespace
GO:0008144 drug binding molecular_function
GO:0005524 ATP binding molecular_function
GO:0030554 adenyl nucleotide binding molecular_function
GO:0032559 adenyl ribonucleotide binding molecular_function

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818069.1 True 1681 mRNA 0.48 9 10921003 10925563
XM_039818070.1 False 1611 mRNA 0.48 9 10921003 10925554

Neighbor

gene id symbol gene type direction distance location
ralba ralb,LOC103370956 coding downstream 5601 10901845 ~ 10915402 (-)
LOC120570237 NA coding downstream 42034 10874099 ~ 10878969 (-)
LOC120570057 NA coding downstream 159682 10759182 ~ 10761321 (-)
myo1b myo1b coding downstream 712841 10143283 ~ 10208162 (-)
LOC120570308 LOC104919611,LOC104963617 coding downstream 798387 10119132 ~ 10122616 (-)
tex30 tex30 coding upstream 995 10926558 ~ 10929023 (-)
poglut2 NA coding upstream 4375 10929938 ~ 10938901 (-)
gtf2e1 gtf2e1 coding upstream 192024 11117587 ~ 11129913 (-)
LOC120569949 NA coding upstream 208418 11133981 ~ 11136197 (-)
LOC120570501 NA coding upstream 214885 11140448 ~ 11146459 (-)
G123160 NA non-coding downstream 45923 10822765 ~ 10875080 (-)
G123142 NA non-coding downstream 138495 10709001 ~ 10782508 (-)
G123145 NA non-coding downstream 157087 10757843 ~ 10763916 (-)
G123131 NA non-coding downstream 248325 10672309 ~ 10672678 (-)
G123130 NA non-coding downstream 252369 10668347 ~ 10668634 (-)
G123232 NA non-coding upstream 211046 11136609 ~ 11137071 (-)
G123286 NA non-coding upstream 608561 11534124 ~ 11534342 (-)
LOC120569662 NA non-coding upstream 615264 11540827 ~ 11544518 (-)
G123290 NA non-coding upstream 622940 11548503 ~ 11548704 (-)
LOC120569667 NA non-coding upstream 667618 11593181 ~ 11596706 (-)
G122878 NA other downstream 1920880 8999462 ~ 9000123 (-)
ccnt2a ccnt2,ccnt2a,LOC104923135,LOC102200362 other downstream 2117899 8793621 ~ 8803104 (-)
traf3ip1 traf3ip1 other downstream 2472573 8399585 ~ 8448430 (-)
tmeff2a tmeff2 other downstream 3603371 7181931 ~ 7317632 (-)
pcbp3 pcbp3,LOC100710924,LOC107660579,LOC103138153 other downstream 4049791 6782446 ~ 6871212 (-)
stxbp5l stxbp5l other upstream 14490 10940053 ~ 11094619 (-)
thsd7ba NA other upstream 355047 11280610 ~ 11467939 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other upstream 1306857 12232420 ~ 12245005 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other upstream 1693790 12619353 ~ 12619815 (-)
ikzf2 ikzf2 other upstream 3250251 14175814 ~ 14201729 (-)

Expression


Co-expression Network