hibch (hibch)


Basic Information

Item Value
gene id hibch
gene name hibch
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 5069166 ~ 5092525 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818148.1
CTCTTTCAGGAAGTAAACGCTAAAATAAGTCAATGCAAAAAAGCATAGACAGTTAGAGTTCAGAGGAAAGAGCAAAGAAGCTGTACCTAAAAGTGCAGCCACAGGATAAAAGTCAAAGATAATAATGTCTTTAACCGTTTTGACATCCGCTTACAGACTGAGGTCCATCTGCAGACTGCAGCGAATCCAGGGCCACATGATGTCGAGTCAGGTTGAACCAGGGGTTCTTCTGGAGAAAGTGGGCAGCGCAGGTGTGATCACCATAAACAGACCCAAAGTCCTGAATGCACTCAACCTGCCCATGATCCGTCAGATCTACCCTCAGCTCAAGATATGGGAAAATGACAATGAGACTGACATTGTGATCATCAGAGGAGCAGGTGGGAAAGCCTTTTGTGCTGGTGGAGACATCAGAGCGGTCACAGAAGCAGGGAAAGTTGGAGATCCTCTCGCAGAGGACTTTTTCCGTGAGGAATACATTCTCAACAATGCTATTGGAACATGCAGGAAACCATATATCGCCCTTATTGAAGGAATAACAATGGGTGGGGGCGTAGGTCTGTCAGTTCATGGACGGTTTCGAGTGGCCACTGAGAAGACACTGTTTGCCATGCCAGAGACTGCCATTGggcTTTTCCCTGACGTGGGAGGTGGCCATTTTCTGCCGAGGCTCCGGGGGAAGCTGGGACTGTTTTTGGCCTTGACAGGCTTCCGTCTCAAGGGGCGTGACGTGCAGAGAGCTGGAGTTGCCACTCATTTTGTTGAGTCTAAGAAGATCCCAGAGCTGGAGAAGGAGCTGGTGGACTTGAAGTCTCCCTCTGCTGAAGACGTCTCCAGAGTGCTAGATTCCTACCAGAGCCAGagtagtctggattcTGAGAAGCCCTTTGTGTTGGACAAGCACATGTCTGATATTGACAGGCTGTTCAGCTCCAGCAGCGTGGAGGGCATCGTGCAGAACCTGAAGGCAGAGGGCTCAGAGTTCGCTAACAAACAAGCCGAGACACTGTCCAGGATGTCTCCCACATCCCTGAAAATCACCTATAAGCAGCTGGAGGCGGGTGCAACTCTGAGCCTGCAGGACGTGTTGGTGATGGAGTATCGCCTGAGCCAGGCCTGCATGAGGGGCTGTGACTTTTATGAGGGTGTACGAGCCGTGCTGGTTGACAAGGACCAGAATCCCAAGTGGAAGCCGTCGACACTGGAGGAGGTGTCTGAGCAGGCCGTGGAGCAGTGCTTCTCCTCGCTGGGAGACAAAGACCTGACTTTCTGATGCTTCCCACCTTCAAACGCACACTACCAAGCCTTGGCCAAGCCTCCTGTCCCCACATCCCTTTTTATGGTCAGTCATGTGTGAGGACTGTACTGCTGaggatggaaaaaaaagtctgttaaTTTACTATTAAATACTGGGGTGACATTTTACAGGAAAATCCAGGCAGCTGAAGAAAAGGTTTGACTCACAGCCCAGAATCTAAAATAGTAGCAGAAGAGGTAGCTAACAGATGCCCTGTGTGTCACACATGAAAAAATGTTTAGTGTAAACTGGCTCCGCAGTGGAAGtcgagtgtttttttttacataagcaATGACTCTCTTCTGCTGCAAATGCAAGGAATGTGCCGCACAGCAGCATTAACACGAGGGCAGGGGAGGAGAAACCGATCCCACCACTGAGTGCTTTATTACATTTCCTGTGGGTGTTTGTTGATGTGACATGGATCGCTATCATCTGTATTTCTGCAGTGTGGTCACTTGTTCTAATTTagcttttgtccttttccagtgtttttcttctcagtggtatttgtagtttttcagaTCTAACATGGATGAaaaaggttttgtttttttttgacatatccAAAACAACACTCCCAGGACGAGGCAGATTTAGAAGTATATCGATATTGGTTCTGAATCCATTTACATGATTGTTACACTGCTTGCCTGTTACATCGCACTTAACCTTCTCTGATGGACAAGTCACTGTTTTTCAGTAGGTATCCCATCACATCCCTAACATTAACTCTCAATAGCTGCATTATTTATGAGACAACCAGTCACATTAAACATCCATGCTGGAACAGAGGGCAATAAACAGTTGGTAATGTGATATCAAA

Function

symbol description
hibch Predicted to enable 3-hydroxyisobutyryl-CoA hydrolase activity. Predicted to be involved in valine catabolic process. Predicted to act upstream of or within branched-chain amino acid catabolic process. Predicted to be active in mitochondrion. Orthologous to human HIBCH (3-hydroxyisobutyryl-CoA hydrolase).

NR:

description
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial-like

GO: NA

KEGG:

id description
K05605 HIBCH; 3-hydroxyisobutyryl-CoA hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818148.1 True 2123 mRNA 0.47 14 5069166 5092525

Neighbor

gene id symbol gene type direction distance location
mstnb NA coding downstream 14543 5050498 ~ 5054623 (-)
ormdl1 ormdl1 coding downstream 67344 4997662 ~ 5001822 (-)
osgepl1 osgepl1 coding downstream 77665 4986399 ~ 4991501 (-)
wdr75 wdr75 coding downstream 197024 4845336 ~ 4872142 (-)
LOC120570304 NA coding downstream 246289 4821819 ~ 4822877 (-)
LOC120570040 NA coding upstream 1960 5094485 ~ 5098836 (-)
LOC120570600 NA coding upstream 47471 5139996 ~ 5146102 (-)
LOC120570601 NA coding upstream 59809 5152334 ~ 5160454 (-)
LOC120570458 lss coding upstream 79594 5172119 ~ 5186282 (-)
LOC120570456 LOC106512812 coding upstream 94018 5186543 ~ 5208674 (-)
G122209 NA non-coding downstream 27379 5041497 ~ 5041787 (-)
G122189 NA non-coding downstream 158278 4910632 ~ 4910888 (-)
G122178 slc40a1 non-coding downstream 227524 4838404 ~ 4841642 (-)
G122167 NA non-coding downstream 253783 4813163 ~ 4815383 (-)
G122157 NA non-coding downstream 292860 4773988 ~ 4776306 (-)
G122288 NA non-coding upstream 26608 5119133 ~ 5122669 (-)
LOC120570604 NA non-coding upstream 71547 5164072 ~ 5166525 (-)
G122347 NA non-coding upstream 456112 5548637 ~ 5552149 (-)
G122352 NA non-coding upstream 480173 5572698 ~ 5573559 (-)
LOC120569308 NA non-coding upstream 482909 5575434 ~ 5579670 (-)
glsb gls,LOC100711430,LOC102197968,LOC101482051 other downstream 96555 4917659 ~ 4972611 (-)
col6a3 col6a3 other downstream 909027 4107999 ~ 4160139 (-)
steap3 NA other downstream 1607463 3426024 ~ 3461703 (-)
G121877 clg16-21h2orf76,LOC101472530,LOC102207757,LOC108238817,LOC102789177,LOC103368446 other downstream 1629500 3414399 ~ 3439666 (-)
G121832 NA other downstream 1682701 3386067 ~ 3386465 (-)
G122404 NA other upstream 919515 6012040 ~ 6014195 (-)
LOC120569614 NA other upstream 1548356 6640881 ~ 6681994 (-)
pcbp3 pcbp3,LOC100710924,LOC107660579,LOC103138153 other upstream 1689921 6782446 ~ 6871212 (-)
tmeff2a tmeff2 other upstream 2089406 7181931 ~ 7317632 (-)
traf3ip1 traf3ip1 other upstream 3307060 8399585 ~ 8448430 (-)

Expression


Co-expression Network