Gene
RNA
| Item | Value |
|---|---|
| gene id | rabl3 |
| gene name | rabl3,LOC102779363 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053123.1 |
| NCBI id | CM020920.1 |
| chromosome length | 39440604 |
| location | 11130057 ~ 11134144 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| rabl3 | Predicted to enable GTP binding activity; GTPase activity; and protein homodimerization activity. Predicted to be involved in several processes, including lymphocyte differentiation; regulation of Ras protein signal transduction; and regulation of protein lipidation. Predicted to act upstream of or within proteolysis. Predicted to be active in endomembrane system. Human ortholog(s) of this gene implicated in pancreatic cancer. Orthologous to human RABL3 (RAB, member of RAS oncogene family like 3). |
| description |
|---|
| PREDICTED: rab-like protein 3 isoform X2 |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07933 | RABL3; Rab-like protein 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039818173.1 | True | 1114 | mRNA | 0.43 | 8 | 11130057 | 11134144 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120569327 | LOC103358003,LOC100710305,LOC102781664,LOC101475894 | coding | upstream | 912407 | 10211110 ~ 10217650 (+) |
| LOC120570306 | NA | coding | upstream | 1025890 | 10099932 ~ 10104167 (+) |
| fev | fev,LOC102784253 | coding | upstream | 1175180 | 9949090 ~ 9954877 (+) |
| cryba2b | cryba2,LOC106581834,LOC106586156 | coding | upstream | 1183356 | 9943512 ~ 9946701 (+) |
| fn1a | LOC103365935 | coding | upstream | 1212431 | 9884821 ~ 9917626 (+) |
| nxph2a | nxph2,LOC101474521 | coding | downstream | 22446 | 11156590 ~ 11175940 (+) |
| LOC120569661 | NA | coding | downstream | 410464 | 11544608 ~ 11546302 (+) |
| dars1 | dars,LOC102778528 | coding | downstream | 416771 | 11550915 ~ 11581353 (+) |
| pnkd | pnkd,LOC100703611,LOC104967495 | coding | downstream | 452864 | 11587008 ~ 11595507 (+) |
| gmppaa | gmppa | coding | downstream | 463730 | 11597874 ~ 11608077 (+) |
| G123184 | NA | non-coding | upstream | 187154 | 10940052 ~ 10942903 (+) |
| G123181 | kdelc1 | non-coding | upstream | 196702 | 10931682 ~ 10933355 (+) |
| G123172 | nepro | non-coding | upstream | 207756 | 10919046 ~ 10922301 (+) |
| G123148 | LOC105912973,LOC105900140,LOC105893694,LOC105893089,LOC105940532 | non-coding | upstream | 328204 | 10801489 ~ 10801853 (+) |
| G123133 | NA | non-coding | upstream | 437588 | 10692265 ~ 10692469 (+) |
| G123279 | NA | non-coding | downstream | 275526 | 11409670 ~ 11425251 (+) |
| LOC120570367 | NA | non-coding | downstream | 484452 | 11618596 ~ 11634792 (+) |
| G123322 | NA | non-coding | downstream | 709236 | 11843380 ~ 11845465 (+) |
| G123323 | NA | non-coding | downstream | 711529 | 11845673 ~ 11846949 (+) |
| G123324 | NA | non-coding | downstream | 712913 | 11847057 ~ 11847386 (+) |
| lrp1bb | lrp1b,LOC102779748 | other | upstream | 511361 | 10335991 ~ 10618696 (+) |
| umps | umps | other | upstream | 1201166 | 9920624 ~ 9928891 (+) |
| G122846 | NA | other | upstream | 2333311 | 8795453 ~ 8796746 (+) |
| hdac4 | LOC103356262 | other | upstream | 2813364 | 8170700 ~ 8316693 (+) |
| G122588 | NA | other | upstream | 3981018 | 7146625 ~ 7149039 (+) |
| LOC120570060 | NA | other | downstream | 117773 | 11251917 ~ 11260642 (+) |
| serp2 | NA | other | downstream | 873513 | 12007657 ~ 12013200 (+) |
| G123539 | sept10,LOC102785043,LOC103375466 | other | downstream | 1915614 | 13049758 ~ 13279866 (+) |
| G123633 | NA | other | downstream | 2219162 | 13353306 ~ 13354085 (+) |
| cps1 | cps1 | other | downstream | 2501410 | 13635554 ~ 13696334 (+) |
