LOC120569961 (LOC103391627,LOC104958343)


Basic Information

Item Value
gene id LOC120569961
gene name LOC103391627,LOC104958343
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 29387766 ~ 29388600 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818184.1
ACATCTACAGCCAACATGACCAACACCAACATGAACATGAGGGGCAAGATTATCTTCTACGAGGAGAAGAACTTCCAGGGTCGCCACTATGAGTGCATGAGTGACTGCTCTGACATGTCCTCCTACCTGAGCAGGTGCCACTCCTGCAGGGTGGAGAGTGGCTGCTTCATGGTCTACGACCGCACCAACTATATGGGAAGCCAGTACTTCATGAGGAGGGGCGAGTACGCTGACTACATGAGCATGATGGGAATGAGAGACTGCATCAGGTCTTGCCGTATGATCCCTATGCACAGAGGTCAGTTCAGGATGAAGATCTATGAGAGGGAGAACTTCGGTGGTCAGAGTTACGAGCTGATGGACGACTGCGACAACATCATGGACCGTTACCGTATGAACGACTGCCAGTCCTGCCACGTGATGGACGGCCACTGGCTGATGTACGAGCAGCCCAACTACAGAGGCAGGATGATGTACATGAGGCCCGGAGAGTACAGGAGCTTCAGGGACATGGGCATGAGTGGCATGAGGTGGATGAGCATGAGGCGTATCACTGATTCCTGCAACTAAATGTTCACTGAATGTGTCAAATaccattaaataaataatgtctgcactatttcaa

Function

NR:

description
PREDICTED: gamma-crystallin M3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818184.1 True 625 mRNA 0.51 3 29387766 29388600

Neighbor

gene id symbol gene type direction distance location
LOC120569960 LOC104958343 coding upstream 20280 29366649 ~ 29367486 (+)
LOC120569957 LOC103391627,LOC102200884 coding upstream 28705 29358171 ~ 29359061 (+)
LOC120569958 LOC103391627,LOC102200884 coding upstream 32916 29353969 ~ 29354850 (+)
LOC120569956 LOC103391627,LOC102200884,LOC106675571,LOC103149914,LOC106933244 coding upstream 37587 29349308 ~ 29350179 (+)
LOC120569959 LOC101464856 coding upstream 40853 29346013 ~ 29346913 (+)
LOC120569965 LOC103391627 coding downstream 3708 29392308 ~ 29393154 (+)
LOC120569968 LOC103391627,LOC105922254,LOC107102032,LOC105922255,LOC104958343,LOC104945912,LOC103367775 coding downstream 12506 29401106 ~ 29421519 (+)
LOC120569967 LOC105922254,LOC107102032,LOC105922255,LOC103391627,LOC105920784 coding downstream 17942 29406542 ~ 29407365 (+)
LOC120569972 LOC103391627,LOC104945909,LOC104958343 coding downstream 27763 29416363 ~ 29417197 (+)
LOC120569966 LOC101169261,LOC105909533,LOC105899371,LOC101061248,LOC105899370 coding downstream 34930 29423530 ~ 29424438 (+)
G127872 NA non-coding upstream 94208 29292980 ~ 29293558 (+)
G127805 NA non-coding upstream 303106 29078731 ~ 29084660 (+)
G127806 NA non-coding upstream 343545 28984700 ~ 29044221 (+)
G127784 NA non-coding upstream 449276 28938151 ~ 28938490 (+)
G127762 NA non-coding upstream 471570 28915972 ~ 28916196 (+)
G127893 NA non-coding downstream 5583 29394183 ~ 29398629 (+)
G127896 LOC101169261,LOC102201764,LOC101061248,LOC102292499 non-coding downstream 67403 29456003 ~ 29456885 (+)
G127934 LOC102777138,LOC101467669,LOC104960780,LOC108238795 non-coding downstream 73312 29461912 ~ 29462923 (+)
G127942 NA non-coding downstream 97631 29486231 ~ 29489650 (+)
G127949 NA non-coding downstream 134751 29523351 ~ 29615024 (+)
LOC120569952 LOC103367759,LOC104957842,LOC103482036,LOC106947595,LOC102235455,LOC102799479,LOC101465930,LOC102199775 other upstream 88405 29296484 ~ 29299361 (+)
G127814 itgb5 other upstream 346542 29028902 ~ 29041224 (+)
prkag3b prkag3,LOC103374929,LOC105937223,LOC107101406 other upstream 977927 28388643 ~ 28409839 (+)
LOC120569906 NA other upstream 2670369 26713350 ~ 26717397 (+)
zmym2 zmym2 other upstream 2903678 26449443 ~ 26484088 (+)
G127932 LOC103367765,LOC102202048,LOC100700231 other downstream 70544 29459144 ~ 29459978 (+)
G127935 LOC103149918,LOC106933234,LOC104960782,LOC104932527,LOC108238793,LOC103482149,LOC105920790 other downstream 78544 29467144 ~ 29474550 (+)
G127938 LOC100695514,LOC102778272,LOC103367768,LOC104960783 other downstream 87512 29476112 ~ 29478950 (+)
G127971 hspd1 other downstream 233092 29621692 ~ 29622929 (+)
LOC120569632 hspe1,mob4,LOC101472107,LOC102310674,LOC100701317,LOC106530744,LOC102783361,LOC103156730,LOC108238849,LOC107095707,LOC106582314,LOC101078365,LOC107389570,LOC104932517,LOC105923971 other downstream 237857 29626457 ~ 29640925 (+)

Expression


Co-expression Network