galnt3 (galnt3,LOC102786846)


Basic Information

Item Value
gene id galnt3
gene name galnt3,LOC102786846
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 16704149 ~ 16712678 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818201.1
CACAGTCACTACAGATGGAGTCACTGTGCAAGTCAAAGGCACAGAGAACTCAAACTGGGCACCAGAGCATGCTCCCTGCGGCTGGAATCCGCGTCTTTACTCCTTCAAGCATCCAACTCTTTATGAAGACCATCCGCTGTGGGGAACCTGCGAAATGTAAGGATTAGATGAACTACAGAGTCCTCTGGTATGGATTGTGACACGCAGAAGTTCTCTCTGCGCATGCGCGCCAGCACGTCTCCTCCCTCTACCTGAGAGGGGCGCACCTGGATCCAACGAGACGGAAGTTTTGTGGAGGCACAGAGCAAATTGTTTTTGTCTTCGCGAAAAAGTTTCTTTGGAGTTCAAGCAACTGATTGAGGATCTCCAATCGAAGCAGGATGTCATTCgttgacattttaaagaacAATTTAGGGTGTTTCTAACCTAACTGTTCCGCGTCTAATGCGGAATGCCATTCCAAAGCCAGCCTGCTCTCTATTCAAGAAGAATGATAGCTCTCCGCAGAGTGCTCCGAAGGCGATTGCACCCAGTTAAACTGGCGATAGTGGCCCTTGTCTTTGTCACATTTGTGTTCTTCATACAATGGGAAGTTGGGAGCCAAAACCAACAGGAGGACCCGTGGCTGAAGGAGATGGCAGTGAAGCGGGATGCCATGCTGGGCATGGTGATGGGAGCTGTTAATAACTTCAGGGATGTGATTCCAAAGATGCAGATCAGAGCCCCTGTACGTCTGCCAGACAGGGCAGACAGCGGGTCCTGTCTGCCGGGTCACTACACTGCCACTGAGCTCAGGCCAGCTCTGGAGCGGCCACCTCAGAACCCTGTTGCTCCTGGAGCAGCTGGGAAAGCTTTCCACACAGAATCACTGAGCACTGAGGagcagaaggagaaggagaggggtGAAGAGAAACACTGCTTTAACCTGTATGCCAGTGACCGCATCTCCTTGAGCAGAGACCTGGGCGCAGACACCAGACCACCAGAATGTATTGAGCAAACCTTCAAGCGATGCCCCGCCTTGCCGACCACCAGTGTGATAATTGTGTTTCACAATGAGGCTTGGAGCACCCTGCTAAGGACAGTATACAGTGTCCTCCACACCTCCCCTGCCATTCTCCTCAAGGAGATCATCCTGGTGGACGACGCCAGCGTTGATGAAGCGTTGAAGGACAAGCTGGATGAGTATTTGAAGCGGCTGAGCATTGTTCAAGTTGTCCGCCAGCGTGAAAGGAAAGGACTCATCACCGCTCGGCTGCTGGGTGCCTCCGTAGCCACCGGTGACACACTCACCTTTCTGGATGCTCACTGTGAATGCTTCAATGGATGGCTGGAGCCCCTGTTGGCCAGGATAGCAGATAACTACACTGTAGTAGTGAGTCCTGATATAACCACTATTGATCTCAATACTTTTGAGTTTGTGAAACCGTCCCCGTATGGCCAGAACCACAACCGAGGAAACTTTGACTGGAGCCTTTCCTTCGGCTGGGAGAGTCTACCAGATCATGAGAAACAAAGGAGGAAGGATGAAACATACCCGATCAAGACTCCCACATTTGCTGGTGGGCTTTTCTCCATCTCAAAAGAATATTTCTACCATATTGGAAGCTATGATGAAAAAATGGAAATCTGGGGCGGTGAGAATATTGAAATGTCGTTTAGGGTGTGGCAGTGTGGCGGACAGCTGGAGATCATCCCTTGTTCCATTGTTGGTCATGTTTTCCGCACCAAGAGCCCCCACACCTTTCCCAAGGGCACACAAGTGATTGCTCGTAACCAGGTTCGACTGGCGGAGGTCTGGATGGACGACTACAAGGAGATCTTTTACCGCCGTAACCAGCAAGCTGCACAGATGGCAAAAGATAGGGCCTTTGGAGAGATCTCCGAACGCATGGACCTCCGTGCGCGACTGCAGTGCAAGAGCTTCTCATGGTATTTGAAGAACGTTTATCCAGAAGTCTTCATGCCTGATCTCAACCCACTCCACTTTGGCTCAGTGAAAAATGTCGGCAAAGACTCATGTCTGGATGTTGGAGAGAACAATGAGGGTGGGAAACAGCTGATCATGTACCCATGTCACGGACTAGGAGGAAACCAGTATTTTGAGTTCTCCACACGTCACGAGATTAGACACAACATTCAGAAggagctgtgtttgcacgggGCAGAGGGGACTGTGAAGCTGGAGGACTGCCAGTATAAAGGCAGGAACACATTTGTAGGAGCAgagcaaaaatgggaactgaaggatAACCAGTTATTCTACATTCCAGGATGGAACATGTGTCTGAGTGCCCGTCATGAGCATCCCTCTCTGGCCCTCTGCAACCCCTCGGACATGTACCAGCTCTGGTCCTTCGTCTGAGTCTGCAAAGTACCACTTTGCAGAATAGCCACTCTGTATGCATAGACGTACTAGGACATGagtgtaatatactgtatgcagtTAACATGCAGTCTTTTTTAGATTTATGACATtgagttttaatttatttttatacgtAGAAAAActgaactgctgctgctgggaagtTTGGACTTTGGGGAGAAACCCCAGTGTGCCACTGCTGGAAAGGAAGAAATCAAACAATGATCCCAGTCAGACTGTGAACTGAGATTCTTGAAACAATTAAGATGCACTGTGCTGACAAGTGCCTCTTTTGTGTTTGAGATGTCTTCACTAGTCCAAGTCATTGCAACCAATGCGTGCAGAATGAGGTATATGAAGCCTAACACTGAACATTTTCCTGTGAGACCCatgaatctaaaacaaaatcaTACAAAAAGACACAGTAGATGGGGTTAAAGTTGGACACACAAAAATCCCATATGTTATGCACCAAAGAGATTGAAAGTGAAAACCTGAAACACACATAACTGTATGATGTGCATTGCccccctttttaaaataacttttttttaataataatacaaaaccttttattttttatatatatatatatatatatatatatatatatattagtgttTATACTGGGTGGGTTGAGTGGTGGAGGGATAGGTAGTGGTGTGGTGGGGTTGTTGCAGGTCTCGGTGGATGCAGAATGATGGCTTCTACAGTGTTGTGATCAAAATAGTCTTCAGATCAGGATAGGAGTTGATTTGAATTATTTCCAGCTAACTATGAGACCAGAAAACATTGGCAAGGCATAGATTTTATAATTTCTTtacagttgccagtttattagaaaaaaaaacgaatgcagtctaatacaacaacCCTGCAATAAATCCTCCCTTAACTAACATTATAATGTGGTGCTGTTAAATTATGTTGCACCATGCTtaggtgtttctaatattatGTCAAACGATTTTATAACCATTCACCATGCATTCTCTTTTTAATTGTGGCAATGTTTATCTgtaatatttccatttttttatacTTAATTTTTTTACGTGAAATGAATGTACGGAAGGAATTCTAATTGTTGATCAAATGTCTGAAACGCTACATCTAAACTGGAGTCCACTAATGAGTCTCTGGTGCAGGCACTAGTGTTTAGATGGCTGTGGAATATTGTAAATAACTTTAAGTTTCAGACTGGGTAAGAAACAGctgcaatgtgtgtgtttgtaaactGTCTATTTTTGCCTTGGTATTAAGAGGTCTTATTTTTAGGTTAATAAATTCAGTTGGGTAGCACTGA
>XM_039818202.1
CACAGTCACTACAGATGGAGTCACTGTGCAAGTCAAAGGCACAGAGAACTCAAACTGGGCACCAGAGCATGCTCCCTGCGGCTGGAATCCGCGTCTTTACTCCTTCAAGCATCCAACTCTTTATGAAGACCATCCGCTGTGGGGAACCTGCGAAATGTAAGGATTAGATGAACTACAGAGTCCTCTGGTATGGATTGTGACACGCAGAAGTTCTCTCTGCGCATGCGCGCCAGCACGTCTCCTCCCTCTACCTGAGAGGGGCGCACCTGGATCCAACGAGACGGAAGTTTTGTGGAGGCACAGAGCAAATTGTTTTTGTCTTCGCGAAAAAGTTTCTTTGGAGTTCAAGCAACTGATTGAGGATCTCCAATCGAAGCAGGATGTCATTCgttgacattttaaagaacAATTTAGGGTGTTTCTAACCTAACTGTTCCGCGTCTAATGCGGAATGCCATTCCAAAGCCAGCCTGCTCTCTATTCAAGAAGAATGATAGCTCTCCGCAGAGTGCTCCGAAGGCGATTGCACCCAGTTAAACTGGCGATAGTGGCCCTTGTCTTTGTCACATTTGTGTTCTTCATACAATGGGAAGTTGGGAGCCAAAACCAACAGGAGGACCCGTGGCTGAAGGAGATGGCAGTGAAGCGGGATGCCATGCTGGGCATGGTGATGGGAGCTGTTAATAACTTCAGGGATGTGATTCCAAAGATGCAGATCAGAGCCCCTGTACGTCTGCCAGACAGGGCAGACAGCGGGTCCTGTCTGCCGGGTCACTACACTGCCACTGAGCTCAGGCCAGCTCTGGAGCGGCCACCTCAGAACCCTGTTGCTCCTGGAGCAGCTGGGAAAGCTTTCCACACAGAATCACTGAGCACTGAGGagcagaaggagaaggagaggggtGAAGAGAAACACTGCTTTAACCTGTATGCCAGTGACCGCATCTCCTTGAGCAGAGACCTGGGCGCAGACACCAGACCACCAGAATGTATTGAGCAAACCTTCAAGCGATGCCCCGCCTTGCCGACCACCAGTGTGATAATTGTGTTTCACAATGAGGCTTGGAGCACCCTGCTAAGGACAGTATACAGTGTCCTCCACACCTCCCCTGCCATTCTCCTCAAGGAGATCATCCTGGTGGACGACGCCAGCGTTGATGAAGCGTTGAAGGACAAGCTGGATGAGTATTTGAAGCGGCTGAGCATTGTTCAAGTTGTCCGCCAGCGTGAAAGGAAAGGACTCATCACCGCTCGGCTGCTGGGTGCCTCCGTAGCCACCGGTGACACACTCACCTTTCTGGATGCTCACTGTGAATGCTTCAATGGATGGCTGGAGCCCCTGTTGGCCAGGATAGCAGATAACTACACTGTAGTAGTGAGTCCTGATATAACCACTATTGATCTCAATACTTTTGAGTTTGTGAAACCGTCCCCGTATGGCCAGAACCACAACCGAGGAAACTTTGACTGGAGCCTTTCCTTCGGCTGGGAGAGTCTACCAGATCATGAGAAACAAAGGAGGAAGGATGAAACATACCCGATCAAGACTCCCACATTTGCTGGTGGGCTTTTCTCCATCTCAAAAGAATATTTCTACCATATTGGAAGCTATGATGAAAAAATGGAAATCTGGGGCGGTGAGAATATTGAAATGTCGTTTAGGGTGTGGCAGTGTGGCGGACAGCTGGAGATCATCCCTTGTTCCATTGTTGGTCATGTTTTCCGCACCAAGAGCCCCCACACCTTTCCCAAGGGCACACAAGTGATTGCTCGTAACCAGGTTCGACTGGCGGAGGTCTGGATGGACGACTACAAGGAGATCTTTTACCGCCGTAACCAGCAAGCTGCACAGATGGCAAAAGATAGGGCCTTTGGAGAGATCTCCGAACGCATGGACCTCCGTGCGCGACTGCAGTGCAAGAGCTTCTCATGGTATTTGAAGAACGTTTATCCAGAAGTCTTCATGCCTGATCTCAACCCACTCCACTTTGGCTCAGTGAAAAATGTCGGCAAAGACTCATGTCTGGATGTTGGAGAGAACAATGAGGGTGGGAAACAGCTGATCATGTACCCATGTCACGGACTAGGAGGAAACCAGTATTTTGAGTTCTCCACACGTCACGAGATTAGACACAACATTCAGAAggagctgtgtttgcacgggGCAGAGGGGACTGTGAAGCTGGAGGACTGCCAGTATAAAGGCAGGAACACATTTGTAGGAGCAgagcaaaaatgggaactgaaggatAACCAGTTATTCTACATTCCAGGATGGAACATGTGTCTGAGTGCCCGTCATGAGCATCCCTCTCTGGCCCTCTGCAACCCCTCGGACATGTACCAGCTCTGGTCCTTCGTCTGAGTCTGCAAAGTACCACTTTGCAGAATAGCCACTCTAAAAActgaactgctgctgctgggaagtTTGGACTTTGGGGAGAAACCCCAGTGTGCCACTGCTGGAAAGGAAGAAATCAAACAATGATCCCAGTCAGACTGTGAACTGAGATTCTTGAAACAATTAAGATGCACTGTGCTGACAAGTGCCTCTTTTGTGTTTGAGATGTCTTCACTAGTCCAAGTCATTGCAACCAATGCGTGCAGAATGAGGTATATGAAGCCTAACACTGAACATTTTCCTGTGAGACCCatgaatctaaaacaaaatcaTACAAAAAGACACAGTAGATGGGGTTAAAGTTGGACACACAAAAATCCCATATGTTATGCACCAAAGAGATTGAAAGTGAAAACCTGAAACACACATAACTGTATGATGTGCATTGCccccctttttaaaataacttttttttaataataatacaaaaccttttattttttatatatatatatatatatatatatatatatatattagtgttTATACTGGGTGGGTTGAGTGGTGGAGGGATAGGTAGTGGTGTGGTGGGGTTGTTGCAGGTCTCGGTGGATGCAGAATGATGGCTTCTACAGTGTTGTGATCAAAATAGTCTTCAGATCAGGATAGGAGTTGATTTGAATTATTTCCAGCTAACTATGAGACCAGAAAACATTGGCAAGGCATAGATTTTATAATTTCTTtacagttgccagtttattagaaaaaaaaacgaatgcagtctaatacaacaacCCTGCAATAAATCCTCCCTTAACTAACATTATAATGTGGTGCTGTTAAATTATGTTGCACCATGCTtaggtgtttctaatattatGTCAAACGATTTTATAACCATTCACCATGCATTCTCTTTTTAATTGTGGCAATGTTTATCTgtaatatttccatttttttatacTTAATTTTTTTACGTGAAATGAATGTACGGAAGGAATTCTAATTGTTGATCAAATGTCTGAAACGCTACATCTAAACTGGAGTCCACTAATGAGTCTCTGGTGCAGGCACTAGTGTTTAGATGGCTGTGGAATATTGTAAATAACTTTAAGTTTCAGACTGGGTAAGAAACAGctgcaatgtgtgtgtttgtaaactGTCTATTTTTGCCTTGGTATTAAGAGGTCTTATTTTTAGGTTAATAAATTCAGTTGGGTAGCACTGA

Function

symbol description
galnt3 Orthologous to human GALNT3 (polypeptide N-acetylgalactosaminyltransferase 3).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG:

id description
K00710 GALNT; polypeptide N-acetylgalactosaminyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818201.1 True 3674 mRNA 0.45 12 16704149 16712678
XM_039818202.1 False 3569 mRNA 0.46 13 16704149 16712678

Neighbor

gene id symbol gene type direction distance location
ttc21b ttc21b coding upstream 854 16690517 ~ 16703295 (+)
scn1laa LOC103371728,LOC103392165,LOC101464243 coding upstream 18663 16659981 ~ 16685486 (+)
slc4a10b slc4a10 coding upstream 326921 16344035 ~ 16377228 (+)
tbr1b tbr1 coding upstream 362526 16337209 ~ 16341623 (+)
tank tank coding upstream 381371 16317374 ~ 16322778 (+)
xirp2b xirp2,LOC102308033,LOC104949804 coding downstream 44968 16757646 ~ 16775305 (+)
b3galt1b b3galt1 coding downstream 63771 16776449 ~ 16832994 (+)
cers6 cers6,LOC102785199 coding downstream 147732 16860410 ~ 16876464 (+)
nostrin nostrin coding downstream 165031 16877709 ~ 16886192 (+)
LOC120570364 g6pc2 coding downstream 179520 16892198 ~ 16894101 (+)
G124430 NA non-coding upstream 220 16703371 ~ 16703929 (+)
G124407 cobll1 non-coding upstream 71808 16598643 ~ 16632341 (+)
G124408 NA non-coding upstream 74035 16596708 ~ 16630114 (+)
LOC120570498 NA non-coding upstream 235513 16468040 ~ 16468636 (+)
G124371 kcnh7 non-coding upstream 287697 16414609 ~ 16416452 (+)
G124524 lrp2 non-coding downstream 244047 16956725 ~ 16957914 (+)
LOC120570570 NA non-coding downstream 293907 17006585 ~ 17008508 (+)
LOC120570569 NA non-coding downstream 297467 17010145 ~ 17011912 (+)
G124627 tlk1,LOC102777640 non-coding downstream 544164 17256842 ~ 17257502 (+)
G124631 NA non-coding downstream 549059 17261737 ~ 17262826 (+)
dap1b dapl1 other upstream 602507 16099271 ~ 16101642 (+)
LOC120570321 NA other upstream 726275 15970982 ~ 15977874 (+)
galnt13 galnt13,LOC102796746 other upstream 1043135 15618514 ~ 15661014 (+)
sumo3b sumo3,LOC106562996,LOC107668404,LOC106523318 other upstream 1130301 15506984 ~ 15573848 (+)
trpm2 trpm2 other upstream 1545212 15137587 ~ 15158937 (+)
col28a2a LOC103355072,LOC104961148,LOC102781941 other downstream 275393 16988071 ~ 17023560 (+)
myo3b myo3b other downstream 415203 17127881 ~ 17198590 (+)
hoxd10a hoxd10,LOC102792757 other downstream 1147482 17860160 ~ 17881328 (+)
hnrnpa3 hnrnpa3 other downstream 1298079 18010757 ~ 18017413 (+)
G125079 NA other downstream 1990350 18703028 ~ 18704528 (+)

Expression


Co-expression Network