LOC120570038


Basic Information

Item Value
gene id LOC120570038
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 4378415 ~ 4394022 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818270.1
ATGAAGAGGCATCGGTTATTACCGCTATGTGCCCTCCTAGGCGTCCTGTTCGCAGGACTCCTCCCTAACCTTGAGGCTCAGGAAGTATTCTGGTACCAAACACACCAGGCATCTTTTCACTGGTCTTCACTTTTGTCCTCCAAACACTCTTTTGAAGATTGTGCACAGGGGTTGGGAGCTGATATATACTTTCTAGTGGATTCATCCTGGAGTATGGGAGTGGAGAACTTTAAGCATATCAGACAATTTCTGTACAGCTTGATACAATCACTGCACCAGGTTGGAGGGGAGAGGTTTAAATTTGCCCTTGTGCAGTACAATACTAAGCCACAAACTGAGTTCCAGCTCAACAGCTACCCAACAACACAGGGAGTCCTGGCACACATCAAGGCTATGCCTTATCGTGGTGGGGGAACCCAGACTGGCCTGGGCCTGGATTTCCTGACTCGTACACACTTGACCACTGCTTCGGGCAGCCGCGCTGTTGATGGTGTGGCCCAAGTGGTGGTTGTGCTAACAGATGGGCGCTCCCAGGATGACGTGGCCGAGCCAGCTCAGGTGCTGTGGCTGGCAGGCGTGGAGGTGTTTGCAGTTGGAGTTCAGGATGCAGTTGATTCGGAGCTAAGGGACATGGCTAGCAAGCCCCATGACACTCATGTGTTCAGTGTAGACTCTTTCCTGACTTTGCGGGATATAATCCAAGATTTAGTAGTGGGGCTTTGTGACACAGTGACCCGGTCAGGGGGTGGTCCTGTGGCAAACGAGGCCCCCGTGTCTGGAGGAGGGACAGCACAAGATTCAGCTGACCTAGTACTCTTAATTGATGGATCAGAGAACGTTGGAGCAGCAAACTTCCCCTTTGTGCGCGATTTGGTTTTGAGAATCATTGAGCCCCTTGATGTGGGCAGGGACACTGTTCGGGTGGCCTTGGCCCTGTACAACGGCAACCCACAGATAAAGTTCTATCTAAATAGCTATGACAGCAAATCATCAGTCCTGGAAGCGGTGAAGGGCCTTTCCTACTCAGGGGGTGATGAATCTAACCTGGGGTTCGCCTTGGAGGAAGTAGCCAAAAGCCTTTTAAGCCAAACAGCTGGGGGCAGGGCCGACGAGGGTGTGCCCCAGATGATGGTGGTTATCAGTGCTGGGCCGTCCACTGATGATACTGGTGCCGGTGACCGGGCCCTTAAGAGGGCCGGCGTTATCACATTAGGTGTTACAATTGGTGACACGGCCAGTGCAGATCTGGAAGCAGTTGCTACAGATAAAAGTTTTGTCCTGTCAGCCCCTGATTTCAGAACAGTGGTGAGCACGGGTGACCGGCTGCTCCCATTAATTAACGGGGTGGTCCAGCGCACCATTATAGTTCAGACCGAGTTCACAGAAGtctTGGCAGTTGGACCACGAGACATCATTTTCCTCATCGACAGTACAATGGGAGCAACGCTTATCAACTCTGTGCAAGAATTCATCAAGCGGTTCGTCGACATCATTCCAATTGGTCCAGATGGAGTTCAAGTGGGTGTGGCCAAGTTCAGCAATGTCCCTCAACTTCAGATGGATCTCAACTCCTATGGGTCCAGGGAGGAATTAACTGCTGCTTTGGGCTCTATCAAACCAAGACCGGGACAGACAGTCAACATTGGAGCAGCCTTGGACTTTGTGCGGACGAATATGCTGCGGCCTGAGAAAGGGAGTCGTATTCAACAGGGGGTACCCCAGCTTTTACTGTTGATGACCAGTAAAAAGTCAAGTGACAGTGTGGAAGCACCTGCTAAAGCCCTGCAGCGACTGGGCGTATTGACTCTAGCTGCAGGTTCCAAGACTGCGACGGAGAATGAGCTGCGGCAGATTGCCTTTGCTGACACTGTTGCGTTCTATTTGAAAGACTTCCGCTCACTGCTTCGCAACCCAAAGGCAATTGTCGATGCACTCTCCACTCTAGCTGGAGTGGTTGTGACTGAAGGACCCACTAAGCCAGTGGTGGAGATAACTACAGTGCAGACTCAAAATGTGGTTCGAGACATTGTCTTCCTTGTGGATGGATCAAACTACGTTGGCAGCAGTAACTTTCCCTATGTGAGAGATTTCATCATCAACGTGGTCAACCAGCTGGATGTACGTCCTGACAGAGTCAGGATTGGTCTCCTGCAGTTTGCTGAGAGCCAAAAGATTGAATTTCATCTGAACAGCTATAGCAGCAGGCAAGATGTTGTCAATCAAATCTCTCAACTCAGGCTGACTGGAGGCTCAGTTTTGAATACAGGAGCTGCCATGAATTATGCCCTTAGCAAAATGTTCCAGCCATCAACTGGGTCACGTAGGAAGCAGGGAGTCCAGCAGGTGTTGGTTCTGATCACAGGTGGTCCAGTCCAGGATCAGGCTAAAAATGCAGCTGATAAATTGGCTCTTGCTGGTGTTTTGACCTTCACAGTCAGTTCTGGAGAAGCAGATGAAGCCCTAATGAAATCAGTTGCCTTTGTTGAAGATTTGGCTTACCATGAAACAAGCTTCTCAAATTTGCCAGCTCTGGCTGGACAAATAATGCCAAAGTTGATAACAGTGGTTGGCGATACAGATGTGACAGAAACAACATTCCCTGAGGAAActgCACAAGATTCAGCTGACCTAGTACTCTTAATTGATGGATCAGAGAACGTTGGAGCAGCAAACTTCCCCTTTGTGCGCGATTTGGTTTTGAGAATCATTGAGCCCCTTGATGTGGGCAGGGACACTGTTCGGGTGGCCTTGGCCCTGTACAACGGCAACCCACAGATAAAGTTCTATCTAAATAGCTATGACAGCAAATCATCAGTCCTGGAAGCGGTGAAGGGCCTTTCCTACTCAGGGGGTGATGAATCTAACCTGGGGTTCGCCTTGGAGGAAGTAACCAAAAGCCTTTTAAGCCAAACAGCTGGGGGCAGGGCCAACGAGGGTGTGCCCCAGATGATGGTGGTTATCAGTGCTGGGCCGTCCACTGATGATACTGGTGCCGGTGACCGGGCCCTTAAGAGGGCCGGCGTTATCACAGTCGGCGTGGCGATTGGTGACACGGCCAGTGCAGATCTGGAAGCAGTTGCTACAGATAAAAGTTTTGTCCTGTCAGCCCCTGATTTCAGAACAGTGGTGAGCACGGGTGACCGGCTGCTCCCATTAATTAACGGGGTGGTCCAGCGCACCATTATAGTTCAGACCGAGTTCACAGAAGtctTGGCAGTTGGACCACGAGACATCATTTTCCTCATCGACAGTACAATGGGTGCAACGCTTATCAACTCTGTGCGAGAATTCATCAAGCGGTTCGTCAACATCATTCCAATTGGTCCAGATGGAGTTCAAGTGGGTGTGGCCCAGTTCAGCAATATTCCTCAACTTCAGATGGATCTCAACTCCTATGGGTCCAGGGAGGAATTAACTGCTGCTTTGGGCTCTATCAAACCAAGACCGGGACAGACAGTCAACATTGGAGCAGCCTTGGACTTTGTGCGGACGAATATGCTGCGGCCTGAGAAAGGCAGTCGTATTCAACAGGGGGTACCCCAGCTTTTACTGTTGATGACCAGTAAAAAGTCAAGTGACAGTGTGGAAGCACCTGCTAAAGCCCTGCAGCGACTGGGCGTTATTGACTCTAGCTGCAGGTTCCAAGACTGCGACGGCGAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818270.1 True 3663 mRNA 0.51 7 4378415 4394022

Neighbor

gene id symbol gene type direction distance location
mlphb NA coding upstream 99804 4214424 ~ 4278611 (+)
trim63b trim63,LOC103367607,LOC102793986,LOC102215866 coding upstream 311654 4064863 ~ 4066761 (+)
LOC120570277 dpp10 coding upstream 527520 3609281 ~ 3850895 (+)
mmadhcb mmadhc coding upstream 979572 3393829 ~ 3398843 (+)
nmi NA coding upstream 985208 3382869 ~ 3393207 (+)
LOC120569241 LOC103373060 coding downstream 36 4394058 ~ 4398874 (+)
maip1 LOC101475169,LOC100711160,LOC102305852,LOC102192410 coding downstream 15842 4409864 ~ 4416440 (+)
pgap1 pgap1 coding downstream 22831 4416853 ~ 4436351 (+)
hecw2a hecw2 coding downstream 56232 4450254 ~ 4512324 (+)
stk17b stk17b,LOC103370988 coding downstream 119644 4513666 ~ 4526011 (+)
LOC120570443 NA non-coding upstream 164655 4213388 ~ 4213760 (+)
G121941 NA non-coding upstream 182408 4195664 ~ 4196007 (+)
LOC120570435 NA non-coding upstream 246055 4084213 ~ 4132360 (+)
G122021 NA non-coding downstream 47595 4441617 ~ 4445127 (+)
G122022 LOC103376870 non-coding downstream 53073 4447095 ~ 4447339 (+)
G122024 NA non-coding downstream 54235 4448257 ~ 4448460 (+)
G122034 NA non-coding downstream 188797 4582819 ~ 4583029 (+)
G122039 NA non-coding downstream 242551 4636573 ~ 4636980 (+)
lrrfip1a lrrfip1,LOC102295012,LOC102195615,LOC100691582,LOC103370951,LOC107396304,LOC107099056 other upstream 25492 4294851 ~ 4352923 (+)
G121917 col6a3 other upstream 267982 4108030 ~ 4110433 (+)
cops8 cops8 other upstream 306301 4061037 ~ 4072114 (+)
ndufv3 NA other upstream 1407083 2962205 ~ 2971332 (+)
pde9a pde9a other upstream 1459666 2868579 ~ 2918749 (+)
G122036 NA other downstream 324263 4718285 ~ 4720843 (+)
zgc:136439 LOC103367146,LOC106581848,LOC101483704 other downstream 422067 4816089 ~ 4818139 (+)
G122128 NA other downstream 500763 4894785 ~ 4895502 (+)
fkbp7 fkbp7,LOC102196462,LOC104949636 other downstream 580767 4974789 ~ 4982979 (+)
LOC120569936 LOC102781033,LOC104920804 other downstream 665979 5060001 ~ 5070248 (+)

Expression


Co-expression Network