LOC120570043


Basic Information

Item Value
gene id LOC120570043
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 5567426 ~ 5570358 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818274.1
ATGGAAGCAGACTACACTGGAACCTACACAATTCAGGAGATTTCAGGAAAGACAGCAACTTTACAAACACCACAGGGTCCCAGCTCAAGTCAGCTCTCAGGTCCCAGCTCTCAGGTCCCAGCTCAAGCCAGCTCTCAGGTCCCAGCTCCAACCAGCTCTCAGGTCCCAGCTCCAACCAGCTCTCAGGTCCCAGCTCCAACCAGCTCTCAGGTCCCAGCTCAAGCCAGCTCTCAGGTCCCAGCTCCAACCAGCTCTCAGGTCCCAGCTCAAGCCAGCTCTCAGGTCCCAGCTCAAGCCAGGTCTAAGGTCCCAGCTCCAACCAGCTCTCAGGTCCAAGCACCAACCAGCTCTCAGGTCCCAGCCCCAACCAGCTCTCAGGTCCCAGCTCAAGCCAGGTCTAAGGTCCCAGCTCCAACCAGCTCTCAGGTCCCAGCTCAAGCCAGCTCTCAGGTCCCAGCTCAAGCCAGGTCTAAGGTCCCAGCTCCAACCAGCTCTCAGGTCCCAGCTCAAGCCAGCTCTCAGGTCCCAGCTCAAGCCAGGTCTAAGGTCCCAGCTCCAACCAGCTCTCAGGTCCCAGCTCCAACCAGCTCTCAGGTCCCAGCCCCAACCAGCTCTCAGGTCCCAGCTCAAGCCAGGTCTAAGGTCCCAGCTCCAACCAGCTCTCAGTTCCCAGCTCAAGCCAGCTCTCAGGTCCCAGCTCAAGCCAGCTCTCAGGTCCCAGCCCCAACCAGCTCTCAGGTCCCAGCTCAAGCCAGCTCTCAGGTTCCAGCTCAAGCCAGCTCTCAGGTTCCAGCTCAAGCCAGGTCTAAGGTCCTAGCTCATACCAGTTCTCTGCTACCTGTTTGGAGTAGTGCTCAAGAACAAGTCCAAAAACTTTGGTCTTCCAAAGATACAGGACAAGTGGAAGCGGTCGTGGGACCATACAAAATTTATGATACCTCTTTTAGAACACTATCGGGACACGGCTGGCTTTCAGATGAGATCATTGATGCATACCTGCACTGCATTATGAAGTTAGCCAAGATACCTGTGCATTGTTTGGATGCTGTACTTGGGTCCTCTGTCTTTCATCGTGGCCAATTCAGAGTTGTTCAAAAGATGAAGTTACCCACAGCCTCAACTTGGATTTGTCCTGTAAACGTTGGAGGTCACTGGATTTTAGTGATTGTGAAAATGGATGAAAAATCCCTCCTTGTGATAGACCCCCTCGGTAATGAAAATATGTACCAGAGAAAAATTCTTTGGAATTGGAGAAATTTTTGGAAGACAAGAAATGTCAGTGAAGGCCCGTGGACGATCCAAACTGCAAAACACAATCTGCAGCAGGACGGCTCTAGTTGTGGAGTCTTAATTTTGATGTTTGCAGAGCTCATTCTCCAAGGTAGAAGTATCTGCGTTGctcaaacagacacagaggaggTCTTAGCTGCAAGAGTCAAAATTGCAGCCACTCTTCTGGAATGCAAAGatgGTGTGGAAGATCTCTGTGTTTCCTGCAACATGTTGCAGTTTGATGCTGAGGAGGATTTCACAGAGATGAGTCGTCTGAGTATTTCTGCAGATGACAGGTCTCTGACTTAAACTGGAAGTCTGAGGTGTACAGAGGGAAAAGGAATGGTGAGAGTACGGTCCCCTGTGGTGCTCTTGTGCTGCGGAACACCTGGTTTGACACACAATCCTTCAGTCTCAAACTGTGGTCTGTTTGTCAGGTAGTCATTGATCCAGGCGATTGTTGAGGGCTTCACCTGTGTCTTCTGGAGTTTCTGACAAAGCAAATCAGGCTGAATTGTGTTAAATGCACTGGAGAAATCAAAGAACATGATCCTCACAGTGCTGCCTGCTTTGTCCAGATGACAGTGGGTTGGTTGAAGCAGGTGGATGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818274.1 True 1884 mRNA 0.51 11 5567426 5570358

Neighbor

gene id symbol gene type direction distance location
tns1b tns1 coding upstream 15264 5304566 ~ 5552162 (+)
LOC120570203 LOC103368839,LOC101465291,LOC102206386 coding upstream 270823 5289083 ~ 5296603 (+)
LOC120570455 plcd4,LOC103372476 coding upstream 301518 5244138 ~ 5265908 (+)
cnot9 cnot9,LOC103372475,LOC106524050 coding upstream 324554 5232370 ~ 5242872 (+)
LOC120569312 NA coding upstream 442039 5119138 ~ 5125387 (+)
LOC120569854 LOC103364251,LOC104945362,LOC101061545 coding downstream 352336 5922694 ~ 5937121 (+)
LOC120569363 NA coding downstream 431483 6001841 ~ 6009742 (+)
col5a2a col5a2,LOC103365627 coding downstream 578214 6148572 ~ 6228385 (+)
tfpia NA coding downstream 870022 6440380 ~ 6514677 (+)
calcrla LOC104930425,LOC103374150 coding downstream 946499 6516857 ~ 6565305 (+)
LOC120569309 NA non-coding upstream 698 5565241 ~ 5566728 (+)
G122349 NA non-coding upstream 5565 5560802 ~ 5561861 (+)
G122321 NA non-coding upstream 268205 5298874 ~ 5299221 (+)
G122320 NA non-coding upstream 268821 5297135 ~ 5298605 (+)
G122319 NA non-coding upstream 270371 5296654 ~ 5297055 (+)
G122374 NA non-coding downstream 440274 6010632 ~ 6011905 (+)
G122390 NA non-coding downstream 492275 6062633 ~ 6062883 (+)
G122392 NA non-coding downstream 501106 6071464 ~ 6072128 (+)
G122393 NA non-coding downstream 520754 6091112 ~ 6091467 (+)
G122394 NA non-coding downstream 521288 6091646 ~ 6092009 (+)
ybey ybey other upstream 355524 5209102 ~ 5211902 (+)
G122226 NA other upstream 401528 5164233 ~ 5165898 (+)
LOC120569936 LOC102781033,LOC104920804 other upstream 497178 5060001 ~ 5070248 (+)
fkbp7 fkbp7,LOC102196462,LOC104949636 other upstream 584447 4974789 ~ 4982979 (+)
G122128 NA other upstream 671924 4894785 ~ 4895502 (+)
G122588 NA other downstream 1576267 7146625 ~ 7149039 (+)
hdac4 LOC103356262 other downstream 2600342 8170700 ~ 8316693 (+)
G122846 NA other downstream 3225095 8795453 ~ 8796746 (+)
umps umps other downstream 4350266 9920624 ~ 9928891 (+)
lrp1bb lrp1b,LOC102779748 other downstream 4765633 10335991 ~ 10618696 (+)

Expression


Co-expression Network