LOC120570057


Basic Information

Item Value
gene id LOC120570057
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 10759182 ~ 10761321 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818286.1
ATGAGTTTGGCAGATAGCCGTGACTACATGAAAGTGAAGCAGGCTGTTCTCGACAAGTTCAACATCAGCGCCGAGACTTACCGCCAACGTTTCCGGTCCAAGACCGTTGTGGCGGGTGAGACGGCGAAAGAACTTCAAGCCCGGCTGAAGGACCTGATGGGGAAATGGCTAGTTCCAGAGTTGCTGACCAATGAGGAAGTGTGTGACCGAATCGTGTTGGAGCAGTTCCTGGACATGCTGCACCCTGAGCTTCAGGTATGGGTGAGAGAGCGCACCCCTGCCTCGTCAGCGCAAGCTGCAGACCTGGTGGAGACCTTCATGGCCGCCAGGCAATCCAGAAGAGGCCCACAACAGCAGGACTGGAGAAGACCCTACCAAGCAGCCCAGCGGGAGCCAGACAAGACATTCTCTGGTAAGTCTGTGGGTGGTAGTGGTCGTGTGTTTAAACCCTCCAATAGCCCCGGTGTTAGCACCATTCCGGCTAGAGCACCTAGGGTACTTGTATGCCATGGTTGTGGCCAGCCGGGTCACATTAGGCCCAATTGCACAGTGCAAAGAATGTCTGATTCCAGAATATGTTACATACCTGGCCATAGCAAGCACTTATCTGGTACTTCTTCCGATGTAACAGTCCCTGTGAAGATAGGTGGAAAGACAGTTCAGGCTTTAGTTGATACAGGAAAGAAGTACCGCAGGCATCTACGGATTCTCTCCCTCGAACTCTTGTTCGGACGGGAGGTGAGAGGCCCGCTGGACATCCTCCGGAGAGTTGGGAGGGGGACGCCTCGCCAACCAACTAACATCGCGAGCTATGTCCTGAAGATGAGGGAGAAACTGGACCAGCTGAGCTCCATGGCCCACAAACACCTGGCCCGGGCTCAGACCGAGGCAGAAGACGTGGTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818286.1 True 906 mRNA 0.55 2 10759182 10761321

Neighbor

gene id symbol gene type direction distance location
myo1b myo1b coding downstream 551020 10143283 ~ 10208162 (-)
LOC120570308 LOC104919611,LOC104963617 coding downstream 636566 10119132 ~ 10122616 (-)
cfap65 NA coding downstream 640421 10104650 ~ 10118761 (-)
wnt6b wnt6 coding downstream 674962 10058333 ~ 10084220 (-)
wnt10a wnt10a coding downstream 715793 10016813 ~ 10043389 (-)
LOC120570237 NA coding upstream 112778 10874099 ~ 10878969 (-)
ralba ralb,LOC103370956 coding upstream 140524 10901845 ~ 10915402 (-)
nepro NA coding upstream 159682 10921003 ~ 10925563 (-)
tex30 tex30 coding upstream 165237 10926558 ~ 10929023 (-)
poglut2 NA coding upstream 168617 10929938 ~ 10938901 (-)
G123131 NA non-coding downstream 86504 10672309 ~ 10672678 (-)
G123130 NA non-coding downstream 90548 10668347 ~ 10668634 (-)
G123128 NA non-coding downstream 91008 10667230 ~ 10668174 (-)
G123127 NA non-coding downstream 92627 10666257 ~ 10666555 (-)
G123107 NA non-coding downstream 270396 10481515 ~ 10488786 (-)
G123160 NA non-coding upstream 61444 10822765 ~ 10875080 (-)
G123232 NA non-coding upstream 375288 11136609 ~ 11137071 (-)
G123286 NA non-coding upstream 772803 11534124 ~ 11534342 (-)
LOC120569662 NA non-coding upstream 779506 11540827 ~ 11544518 (-)
G123290 NA non-coding upstream 787182 11548503 ~ 11548704 (-)
G122878 NA other downstream 1759059 8999462 ~ 9000123 (-)
ccnt2a ccnt2,ccnt2a,LOC104923135,LOC102200362 other downstream 1956078 8793621 ~ 8803104 (-)
traf3ip1 traf3ip1 other downstream 2310752 8399585 ~ 8448430 (-)
tmeff2a tmeff2 other downstream 3441550 7181931 ~ 7317632 (-)
pcbp3 pcbp3,LOC100710924,LOC107660579,LOC103138153 other downstream 3887970 6782446 ~ 6871212 (-)
stxbp5l stxbp5l other upstream 178732 10940053 ~ 11094619 (-)
thsd7ba NA other upstream 519289 11280610 ~ 11467939 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other upstream 1471099 12232420 ~ 12245005 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other upstream 1858032 12619353 ~ 12619815 (-)
ikzf2 ikzf2 other upstream 3414493 14175814 ~ 14201729 (-)

Expression


Co-expression Network