LOC120570062


Basic Information

Item Value
gene id LOC120570062
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 12949768 ~ 12960648 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818289.1
TTTGGCTATGCGCTGGATACAGCAGACAGTATGGCGGACAGCGAAAGTGATTTGGAAACAGACGGGTTTGAATTGGCTCTGGACACACTGTGTGATAGACACTGCAGCGATGAGTCGTCTCTAAAGAGCAAAGGCTATTGCTCTGAGTTCTGTGAGTTGGTTGAGGAATACACAGGGCAATGGCAAGTTCCTCTCCCTCAGCTAAAGGTGCTGCGCACTGCACTCTGCAGTTTCACTAAAGCCACTGCTGCCTTCCCTGATGACTGTCAGCACATCCACTATGTTCTCAGCAGTATGGCCTTGAGCTTCTTTGAACTGATGCTGTTTTTCAGCAAAGAAGAATTTGTGGAAGAGCCTTTAAAAGACATCCTTGATTCCTTTCAGGAGTGCCACTCTCAGCTCCTGAGGCACAGGAACATCTACCTTCAGCATGTGAAGCTGATCATTAAAGCGGGAGGCCCATGGGAGAATCCAGTGCTGCAAGGAATCCTGAAGGAGGCTGACTTGACACGAAAAGAGGTTGAGGACTACTTAAGCTCAGAGTTGCCAGTATTCTTTGAGCTGCGGATTCGCTATCTGTGTGCCTGTGAACGAATGCAAGAGGCCATGGCCCTGGCTAAAAGCTGCCTGGAAAATCGCGAGGCTGCAAAGCATCTGTACTTCCATCAGGTCTACCTGACCTGCCTCTACAAGGCCTCACTGCATGAACACCTCCACAAGGAGATGGCAGAGATAGATGGCCGTGATGCAGTGGAGATCATCTGCAACACAGAGAGCGTTGAAAAAGATGAGCTTCCATTGTCTCTCTGTAAAGCTTTCCTTACCCAGCAGCTACACAATGGAGACATGTACTACATCTGGGACTTGGTGTTCATCTGGAGCAGGTTGCATCTTAGGGCCCATCCCTCCAGACATGGCTTCCTGGGCGAGTGCTTGCAGTTGGCTTCTTTGGCTACTAACGCCAGAGCCATCTTCCCCTTCATCAAGCTGGTCACCACAGAGCTGGGGGTTGACGGAGTCCAGGTCTGTGTGGAGCTTTGTGCCAGGGCCTTGCAGCTGAGTGACATGCAGGTAGACAGTGTAACCCGGTCCCTTATCTGCAAGACCATCGCCTTCCTGCAACCTCATGACCTGGAGATCTGTCGGGCGTGTGCCCTGCTGGTCTTCTGCCAGGAACGCAGCCTGGAAGCTTACCGAACTGTCTGCCTGCTTTACATGCATCCTGACCAGGAGCCGCATCCCCACAACAGCCCTGTCCGGACCAGTGTTCGCTTCCATATTCTGCAGATGCTCAAGGAGCGCCTGTGTTTTGACCCTGAGTTTTGGAACCTCCTGACCCTCAGGACCCATTGCTTGGAGTTGATTAGTGACAAGGCCATGAAGGCTGCTGTTCTCAGTGAGataaaggaggaagaggagaaggaataCAGTGAAGAGCTGTTAATAAACAggtgtataaatgactcatgcACTCAAGGTTTCAATTCCTGCCAGTGCACTGAAGCTGCTTTTGTGAACCAAGACCTCCTAGAGGAGCAGACTGTGGATGGAAAGACAGAAAAGTGTGTTGACCCATCAAACAATGCTCTTCCGAAGAggagaaaatggaggaaaagcctGCGAAGGAGAAACCAATCTATGTCTGACGATGAGGCTGACCTTGGTGATGATCCAGAGATCAAATACAATCTCAAATCCACCTCTTTAGGCAATAAGCCTGTGTATTCACTAAGACACAATATCACTAACATGGAGAGTTCATCTTCTGTAAAAGGCCCCCTAACCCGCAAGAGAGAATACTTGTCTAGATATGTGAAGAGCCAAATTTTGAAAAGGAAGGGTCAGAAGAAAAGATGGTTGCAGGGTGTTCCCAGGCTGGAGCAGGTGCAGACCGTTAAAGAGAAGAAGGTGAAAGTTAAAGAGAAGAAGGTGAAAGTTAAAGGGAAAAAACGGGGACGGAAGCCTTTACAGAAACTGGAACTCTCCTACCCTGATAATGAAATGTCCCTTACAGAGGAGGAGTCTGGTTTCGAGGAGATAACTGACACAGAAGACAAGGAGCTGGATATGCCTCACCTGGAGAATGAACTTGAACAAATGAGCAAACCGAAAGAGAATCATTGTGAGCAAATGGATGATCTTGAGAAGGAAAATGGACTTGAGAAACATCCCGACTTGGTCTGTGGTAGCAGTCTCAATGAACAGACCCAAATGGAATCTCAAACACAGTTCTGTGGAGGTCTTCCCTGTGAGCCTCAAGCTGCTGTTCCTGCTGTTGAAGCTGATCCTGAACTTGATGGTCCGCCCTTAGACTTATTGGATTGTCCAACAATGTTACACAGCTACTCTCTTAAGTCCAAAAAGCCTGATGGTGAGAAACTGCATCCTGCAGAATCCTCGGCACCAAATGAGGTTAATGGCGACACGGGAGAGGAGCCCAAACCCACAATACAAACAGAAGTGTCAAACACTGAGGTTAAAGCCAAGAGAACGTGGAAGGACCGAGTACTCCGTACTCAAAAGTATGCCCACTTGATGTACCACTGCAACTTTTGCCACAAAGACTATAAAGGCCTGAATGTTATGAGACATGCTCTCTCACACCTTAAAAGtagaaaactaaaatgtataCTCTGTGGAAAACGCTTCAAACAGTTCTCTTTTGCCGAAAAGCACGTCCTGGACCACATTGATGAAATGTGCAGGCAGAAGCCCCCTGATAAGGAGCCTCGCACCGAGGACACTCCAGCTGCTAATGGAATTGTAGATGATATGAAAAAACTGAGCCAGCCTCAGGATGAAATTCAGACTCCCTTTTCGGATGAGAAAACTCCCGAACAGAAACCCGCAGGCAAAACCAAAGTGTCGAGCCTCAAGAGGGAAGATCGAATCATCAGGAACCTCCGCACCCTCATCAAAAAGACATCTGTGCTTCACAAAAAGTGCAAGAACCCTGACGCTAATATATTCAAGCAGGTAGACTTCAAGGATGAGCAGGTAGTCATTAAAGATGGCCTGGTGATTGTAAAAGATACATCTGTGATGGTgaaggaggaagaaggagaagggGAGGAGAAGCCGGCAGGAGAAAATGGCTACGGTGTGGACATCACTTATCACCTGTGCCCCTCAGAATCCTGTGATAGAGTATTCTTACGGATCAGCACCACACTAACAAAGCATGCCATCAAATGCCACATTAACGAAGAGAAGGTGCTGGAGAAGACTTTTGTGTGGGCCAAACACAAGTGCAGCATATGCTTTAGGCAGATACAGGTCCTCCAGCATTATAAGGACCACATGAAGCTCCACAATACTGCTCTCCAGCACTTCTGCTACCACCTGGAGTGTACCCAGCGCTTTTTGACGCTGCAGGAATTAAAGGACCATGTCAGAACTCATCAGCCCTTCAGACCTCAGTGTTCGGTCACAGACTGTGAGAAGCTCTTCTCGACCCTTCAAGGTCTCTATGACCATGAATGGAGACACTACATCCCAGCGCCTCAAAGGGAGGAGCTAGAGATGGGACTCAGCAGACAGATGAAGCAAAATCCCGAAGCTCCGTGGAAGCAGAGAATGAAGGTTGAGGAGATATGGCTCCAGAATAAAACTGAGCCGAGGCAGAGTCCGGCCCTTGACCGTGGCGTGGCCTGTGGTATTGAGGATTCAAACGTAATTGTAAAACCTGAAGATAAGCTTTGTGAAGTCTCAGGCAGTAATCAAAACCTGTCTGTACCTGAACACTGTGTGAAAACTGAGAACACAGTCACTTGTGAGCCCACGGATGAGAGCATAGCCCCCATTAACGGACATGAGACCGAGACGAGAAACCAGGCGTCGGAGGGGAAGACATCCACTTCCCGAACAGGGAATGCTGCAGCAGCTCCAAGTAAGAGCTGTCGAAAAAGAAAGCCCATCGAGTGGGACCCCTTGAATGTCCGAGACCCTGAGGATTTGTCCACTATATCGGAGGGAGTGCAGCAGAAACTGGGAGAGCCACACATCACTGAGCACAAAACCTTCAAACCTGAAGATCCATCCTACGCGACTTTCATCAAGGCCCCCTTCATCCGGCCGCCGCCCTCCACCTACCTGGATGAATCTCGGCTCTCAATGCGCAAAAGGAGGTCCACCGATGAGGCTTCGCCGAGGAAAAATGCTTACTGGAGCAATAAGAAAAAGATGGAGCCTGTCCCAGAAAAGCAGCAGGTGGAAAATGTGGCCTCTGCGCAGAAGATGAGGCAGCGCTGTGACAAATGTCTGTCCTCCTTCAGCAGCTTAGAAGAGTTAGAGAAACACCAAGCCCTTAACACCTGCTCTGCACTCTTCGGCTTTGATTCCGACGATGAAAgttaGGAAGAGGAGCTGTAACTGGGGTGACAACTGAACTCATGAAAACAAGCCAGCTGGCTCAGGGCAAACATTCAAGATAAAGGAACACTGGAACCCTTTCCTAATACTCAGATACAGTACTTATTTGATATTCCTGAATACCAGTTTGTAAACATATGTGCCAACATGGTTAATTTGAGGTTTAGTTCATTGACGGAACCCTTTTTTTGAAGCAataatttttaataataataatttcaataGCTAAAACTGGTTTAGTCACATTGTTTGCCTCAAAACGTCCCTTTGTGTGTCACTTTGTCAAGTAggtcaaataaaaacatatctGTGATAAATACA

Function

GO: NA

KEGG:

id description
ko03030 DNA replication
ko03420 Nucleotide excision repair
ko03430 Mismatch repair
ko03440 Homologous recombination

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818289.1 True 4692 mRNA 0.48 12 12949768 12960648

Neighbor

gene id symbol gene type direction distance location
c12h3orf38 LOC102213804 coding downstream 13661 12933808 ~ 12936107 (-)
epha3 epha3,LOC102788365 coding downstream 133183 12709285 ~ 12816585 (-)
epha6 epha6,LOC103354217,LOC101465476 coding downstream 472988 12265973 ~ 12476780 (-)
LOC120570415 arl6,LOC102790207,LOC101465764,LOC106903726,LOC105936143,LOC106936476,LOC103461146,LOC104956034,LOC103354306,LOC103141480 coding downstream 684338 12261742 ~ 12265430 (-)
LOC120570414 cldn14 coding downstream 696266 12247769 ~ 12253502 (-)
htr1fa htr1f coding upstream 2079 12962727 ~ 12993294 (-)
chmp2ba chmp2b coding upstream 89418 13050066 ~ 13061748 (-)
edar edar coding upstream 168353 13129001 ~ 13167336 (-)
sept10 sept10,LOC103375466,LOC102785043 coding upstream 315810 13276458 ~ 13287492 (-)
LOC120569897 LOC103363871 coding upstream 411699 13372347 ~ 13423647 (-)
LOC120569379 NA non-coding downstream 60621 12886469 ~ 12889147 (-)
G123480 NA non-coding downstream 330484 12619036 ~ 12619284 (-)
G123369 NA non-coding downstream 943366 12004875 ~ 12006402 (-)
G123356 NA non-coding downstream 993168 11953923 ~ 11956600 (-)
G123348 agpat3 non-coding downstream 1050598 11877339 ~ 11899170 (-)
G123580 NA non-coding upstream 55703 13016351 ~ 13016738 (-)
G123620 akap17a non-coding upstream 335400 13296048 ~ 13297924 (-)
G123629 NA non-coding upstream 363572 13324220 ~ 13324438 (-)
G123632 NA non-coding upstream 387170 13347818 ~ 13348186 (-)
G123674 NA non-coding upstream 519247 13479895 ~ 13481465 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other downstream 329953 12619353 ~ 12619815 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other downstream 704763 12232420 ~ 12245005 (-)
thsd7ba NA other downstream 1481829 11280610 ~ 11467939 (-)
stxbp5l stxbp5l other downstream 1855149 10940053 ~ 11094619 (-)
G122878 NA other downstream 3949645 8999462 ~ 9000123 (-)
ikzf2 ikzf2 other upstream 1215166 14175814 ~ 14201729 (-)
G123886 NA other upstream 1823913 14784561 ~ 14794497 (-)
G123960 NA other upstream 2023837 14984485 ~ 14993789 (-)
G124303 dapl1 other upstream 3138630 16099278 ~ 16101593 (-)
LOC120570587 LOC100705152,LOC102292123,LOC101476258 other upstream 3247042 16207690 ~ 16222736 (-)

Expression


Co-expression Network