abcb6b (LOC101063776,LOC107092899)


Basic Information

Item Value
gene id abcb6b
gene name LOC101063776,LOC107092899
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 28289987 ~ 28339721 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818331.1
ATGGCAGacgtccctgtgaagagtggaagagaaggaaaaagaggagTCGTAAATGTTGAGATCCAacactcctcctctccctcctcctcttcctccttgcCGTCCGTGTGGCAAGGCTTTGGGAGGAAGGTGAAACTGTTACTGCCATACGTCTGGCCCAAAGGCAACGCAGCGCTGCAGGGACTCGTGCTCCTGTGTGTGGGCCTGCTGGCAGCAGAGCGACTGGTTAATGTGCTGGTGCCCGTGTACTCCAAAAACATTGtGAATGAGCTTTCTGCAGGAGGCGGCTGGACTTCGATGATTGCCACTGTCTGCATCTACACACTGCTCAAGTTCCTACAGGGCGGAGGGGCAGGGACCTCTGGTTTCATCAGCAACCTTCGCCAGTTCTTGTGGATCAAAGTTCAGCAGTTTACCAGCCGAGGCGTTCAGGTGTGTTTGTTTTCCCACCTGCACGGCTTGTCTCTGCGCTGGCACCTGGAGCGACGCACCGGAGACGTGCTGAGGAGCGTCGACAGAGGCACGTCCTCCATCAACAACCTGCTGAGCTACATCCTGTTCAGTATCCTCCCCACCatctgtgacatcatcatcGCCATCATCTACTTCGTCTCCTACTTTAATATCTGGTTTGGACTCATCGTTTTCACCTGCATGGTCCTCTACCTCACCTGTACCATCCTGATTACAGAGTGGAGGACGAAATACAGGAGAGAGATGAACAACCAAGACAACAATGCCAAGTCCAGAGCCGTAGACTCGCTGCTCAACTTTGAGACTgtAAAATATTACTGCGCTGAGGATTATGAAGTCCGCTGCTTTGAGGAAGCCATTCGGGAATATCAACACTGTGAGTGGAAGAGCTCTGCCTCCCTGGCTCTGCTGAATCAATCCCAGAACATCATCATAGGATCAGGACTGCTGGCTGGATCTCTGCTCTGTGCCTACCTGGTCTACGAGGGACAATTCCAGGTTGGAGACTATGTTTTGTTTGGTACCTACATCATCCAGCTGTACACTCCTCTGAACTGGTTTGGCACCTACTACAGgCTGATTCAGAGTGCATTTGTTGACATGGAGAACATGCTGGCACTGTTGACGGAGCAGAAAGAGGTTCAGGATTCAGAGGATGCATGGGACTTGCAGCTCACAGCAGGTCAGGTGGAGTTTGACAGAGTCTGTTTCAGCTACGTGCCTGGcaCTGAGATTCTTAGGGATGTGTCCTTTACGGTGGAGGCGGGACAGACAGTCGCGTTGgtTGGTCCGTCTGGATCAGGGAAAAGCTCCATCCTGCGTCTGTTGTTCAGATTTTACGACCCTCAGAGTGGCAGCATCCGCATCGACGGTCAGGACATCTCCAAGGTGCGTCAGTCTTCTCTGAGGTTTTACATCGGCGTGGTTCCCCAGGACACGGTTCTCTTCAACAACACCATCGGCAACAACATCCGCTACAGCCGAGTCACAGCTAGcgacgaggaggtggagagaGCTGCCATGGCTGCTGACATACACGCCAGGATACTGGAGCTACCTCAGGGATATAACACGGAGGTGGGGGAGCGAGGTCTGAAGCTCAGCGGTGGGGAGAAGCAGAGAGTGGCGATCGCTCGAACCATCCTGAAAGAACCTCGGATCATTCTGCTGGATGAGGCCACATCTTCACTGGACACCCAGACTGAGAGGAAGATCCAGGCTTCACTGGCCGAGGTCTGCACCAACAGGACGACTATAGTGATCGCACACAGGTTGTCCACCATTGTCGGAGCAAACCAGATCCTGGTGGTTCACAACGGACAGATagcagagagaggaagACATGACGAGCTGCTGGTCCAGGGAGGTCTGTACGCTGCCATGTGGATGAAACAGCAGAAAAGTCACGACacgcaaacagaaacacagacaaacaatcaGACTCAAGACACTTGACATTGAACTGAGtgtgcacattttttttattcaatactCACCACATCATTTTTGGTAACATCTGATGTATTGTTATCTCGTGTATCTGCATGCTACAGTACAACTGAAGTCTGGAGAAAGTGAAACCCTGCAGAAGGTTATGACATTAACACCAGTGTCTGTTGTCATGGTTCATACCAGCAGCAGCTatatccaacacattctcactctcccatcgcacaaaatacggacgcttggtcatgggcctttggtgtttgttattcacgcgaaaagtctcctttagc

Function

NR:

description
PREDICTED: ATP-binding cassette sub-family B member 6, mitochondrial

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0006200 obsolete ATP catabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0042626 ATPase-coupled transmembrane transporter activity molecular_function

KEGG:

id description
K05661 ABCB6; ATP-binding cassette, subfamily B (MDR/TAP), member 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818331.1 True 2213 mRNA 0.52 19 28289987 28339721

Neighbor

gene id symbol gene type direction distance location
kalrna kalrn coding upstream 7664 28092438 ~ 28282323 (+)
LOC120569523 LOC104941714,LOC104924856,LOC103373286 coding upstream 211409 28026535 ~ 28078578 (+)
LOC120569522 LOC104941720 coding upstream 278343 27964421 ~ 28011644 (+)
LOC120570327 cntnap5 coding upstream 379260 27804925 ~ 27910727 (+)
LOC120569540 LOC100689803 coding upstream 702398 27581078 ~ 27587589 (+)
ttll4 ttll4 coding downstream 22411 28362132 ~ 28382307 (+)
fer1l6 NA coding downstream 74917 28414638 ~ 28449950 (+)
LOC120570105 NA coding downstream 145202 28484923 ~ 28487750 (+)
LOC120570107 NA coding downstream 152447 28492168 ~ 28497602 (+)
LOC120570328 NA coding downstream 269970 28609691 ~ 28611484 (+)
G127613 NA non-coding upstream 61537 28228096 ~ 28228450 (+)
G127570 NA non-coding upstream 346365 27938694 ~ 27943622 (+)
G127542 NA non-coding upstream 639204 27650396 ~ 27650783 (+)
G127541 NA non-coding upstream 663367 27626408 ~ 27626620 (+)
G127538 NA non-coding upstream 698769 27590977 ~ 27591218 (+)
G127623 NA non-coding downstream 3771 28343492 ~ 28343798 (+)
G127665 NA non-coding downstream 45696 28385417 ~ 28385642 (+)
G127701 NA non-coding downstream 194222 28533943 ~ 28534172 (+)
LOC120570261 NA non-coding downstream 372710 28712431 ~ 28713525 (+)
G127747 NA non-coding downstream 552942 28892663 ~ 28895512 (+)
LOC120569906 NA other upstream 1572590 26713350 ~ 26717397 (+)
zmym2 zmym2 other upstream 1805899 26449443 ~ 26484088 (+)
mphosph8 mphosph8 other upstream 1850702 26411477 ~ 26439285 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other upstream 2160108 26116988 ~ 26129879 (+)
cacnb4a cacnb4 other upstream 2625560 25630107 ~ 25664427 (+)
prkag3b prkag3,LOC103374929,LOC105937223,LOC107101406 other downstream 48922 28388643 ~ 28409839 (+)
G127814 itgb5 other downstream 689181 29028902 ~ 29041224 (+)
LOC120569952 LOC103367759,LOC104957842,LOC103482036,LOC106947595,LOC102235455,LOC102799479,LOC101465930,LOC102199775 other downstream 956763 29296484 ~ 29299361 (+)
G127932 LOC103367765,LOC102202048,LOC100700231 other downstream 1119423 29459144 ~ 29459978 (+)
G127935 LOC103149918,LOC106933234,LOC104960782,LOC104932527,LOC108238793,LOC103482149,LOC105920790 other downstream 1127423 29467144 ~ 29474550 (+)

Expression


Co-expression Network