LOC120570105



Basic Information


Item Value
gene id LOC120570105
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 28484923 ~ 28487750 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039818332.1
ATGGAGAACTCAACACAGATTAAGTCATTTGTGTTGGCTATGTATGGTAACATGGGACCCTTAAAGTACttgtatttcactgtggcaTTGCTATTTTACATATCAGTTATTTTGGCCAACACAGTTCTTATTGTCATTATTTATGTTGACAGAAATCTGCATGAGCCCATGTACATATTCCTGTGTAATTTGTTTGTTAATGAAATATATGGCAGCACGTCCTTGTTGCCTTGCTTGATGCATCAAGTGTTGTTGGACACTCATGAAATTCCTGTCCATTTCTGTTTCCTTCAAATATTTAACATTCATACGTATGTAGCTGTTGAATTTGGAACGTTAACAATAATGGCATATGACagatatatatgtatttgtaaGCCTTTACATTACAATGCCATAATAACTAAACAAATAGTATTAAAGGTAATTCTTATTATTTGGATAGTTTCCTTTGTAGAGGTTGGAGTTTTACTGTCGTTCACTATTCGTTTAAAGCGTTGTGGGACTGTCATCCACAAGGTTTTTTGTGCACATCACCTTGTAGTTGAACTTTCTTGTTCACCAGACAGAACAGTGTCACTTATTCATGATCTGGTGTTTGGACTATTTTTCACTGTTGCTATTCCTGTCACTTATATTTCATTCACTTATGTCAAAATTTTGGCTGTGTGTTTAAAAGGTTCCAAAGAGACCAAAGTGAAGGCTGTTGACACCTGCACTCCACATTTAGTTTCACTTATTAGTTTTGTCTTTGCCTGTTTTTACAATCTGATCTCTCAGAGATTTGCCTCTGTTCCATATCCActgtgtgttgtcttttccaTGTATATAGTGATTGTTCAGCCTCTTCAAAATCCAATCATGTATGGGCTTAAACTGTCAAAAATTAGACATGCTTGTAAACATTTGTTGACATTAAAATCATTGCAACTCTACATTTTCCTGCAGCGTATTTACATTCTCGCGTTTAccagagactacctccagaatcCAGAATGTGGAAGTGGAGAGGATGggatggcctgccagcagtcctga

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039818332.1 True 1038 mRNA 0.37 2 28484923 28487750

Neighbor


gene id symbol gene type direction distance location
fer1l6 NA coding upstream 34973 28414638 ~ 28449950 (+)
ttll4 ttll4 coding upstream 102616 28362132 ~ 28382307 (+)
abcb6b LOC101063776,LOC107092899 coding upstream 145202 28289987 ~ 28339721 (+)
kalrna kalrn coding upstream 202600 28092438 ~ 28282323 (+)
LOC120569523 LOC104941714,LOC104924856,LOC103373286 coding upstream 406345 28026535 ~ 28078578 (+)
LOC120570107 NA coding downstream 4418 28492168 ~ 28497602 (+)
LOC120570328 NA coding downstream 121941 28609691 ~ 28611484 (+)
LOC120570124 NA coding downstream 219792 28707542 ~ 28708882 (+)
LOC120570350 NA coding downstream 247848 28735598 ~ 28737558 (+)
raph1a LOC103372763,LOC102310239 coding downstream 316494 28804244 ~ 28892620 (+)
G127665 NA non-coding upstream 99281 28385417 ~ 28385642 (+)
G127623 NA non-coding upstream 141125 28343492 ~ 28343798 (+)
G127613 NA non-coding upstream 256473 28228096 ~ 28228450 (+)
G127570 NA non-coding upstream 541301 27938694 ~ 27943622 (+)
G127542 NA non-coding upstream 834140 27650396 ~ 27650783 (+)
G127701 NA non-coding downstream 46193 28533943 ~ 28534172 (+)
LOC120570261 NA non-coding downstream 224681 28712431 ~ 28713525 (+)
G127747 NA non-coding downstream 404913 28892663 ~ 28895512 (+)
G127762 NA non-coding downstream 428222 28915972 ~ 28916196 (+)
G127784 NA non-coding downstream 450401 28938151 ~ 28938490 (+)
prkag3b prkag3,LOC103374929,LOC105937223,LOC107101406 other upstream 75084 28388643 ~ 28409839 (+)
LOC120569906 NA other upstream 1767526 26713350 ~ 26717397 (+)
zmym2 zmym2 other upstream 2000835 26449443 ~ 26484088 (+)
mphosph8 mphosph8 other upstream 2045638 26411477 ~ 26439285 (+)
G127165 LOC100691947,LOC102776592,LOC101469272,LOC102213137 other upstream 2355044 26116988 ~ 26129879 (+)
G127814 itgb5 other downstream 541152 29028902 ~ 29041224 (+)
LOC120569952 LOC103367759,LOC104957842,LOC103482036,LOC106947595,LOC102235455,LOC102799479,LOC101465930,LOC102199775 other downstream 808734 29296484 ~ 29299361 (+)
G127932 LOC103367765,LOC102202048,LOC100700231 other downstream 971394 29459144 ~ 29459978 (+)
G127935 LOC103149918,LOC106933234,LOC104960782,LOC104932527,LOC108238793,LOC103482149,LOC105920790 other downstream 979394 29467144 ~ 29474550 (+)
G127938 LOC100695514,LOC102778272,LOC103367768,LOC104960783 other downstream 988362 29476112 ~ 29478950 (+)

Expression



Co-expression Network