LOC120570203 (LOC103368839,LOC101465291,LOC102206386)


Basic Information

Item Value
gene id LOC120570203
gene name LOC103368839,LOC101465291,LOC102206386
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 5289083 ~ 5296603 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818432.1
TGTCAAACACAGGAAGTGTAGTAGAGGTCGCTGCatgttaatatatatgtcaatgataaTAACCATAACGCACTATTGCAACACATCCATACATTGCACGCATGAGTATTTTAGTTGGTTGAACAGTGCTGTTTAGAAAGAAACGGTGTACACTGGAACCGATAGCCTCCAAGACAGCGGCATGAGATGGAGACATTGAAGGTCTTTGCTCCTGCAAAGTGTTCCAACTATATAGTGTGATTCCACTGGGGGTGTGCAGATACCAGCAACATGCCCCTGTCAGACTTTCTGGACGGCCTGAAGGACAACCCATACTTCGGGGCTGGCTTTGGACTGGTTGGGGTTGGGACAGCGTTGGCCGTGGCCAGGAAAGGTGCCCAGGTGGGAATGATCTTCTTCCGCAGGAACTACATGATCACTCTGGAAGTTCCCAGCAGGGATAAGAGCTACCACTGGCTGCTGAGCTGGATCACCAAACACGCCAAGCACACCCAGCACCTGAGCGTGGAGACCTCCTACCTGGCACATGAGAGTGGACGGGTTCAGACACAGTTTGACTTCCACCCAAGCCCTGGGAACCACATCATCTGGTACGGGAGGCGGTGGATCAGGGTGGAGAGGACCAGAGAGAAGCAGATGGTGGATCTGCACACTGGAACCCCGTGGGAGTCCGTCACCTTCACTGCTTtaggcagagacagacagattttCTTTAATATCTTACAAGAAGCCAGAGAATTGGCCCTAAAGCAGGAAGAGGGACGGACAGTGATGTACACAGCCATGGGTGCTGAGTGGAGGCCCTTTGGGTTTCCACGGCGACGCAGACCTCTCAGCTCTGTGGTCCTGGAGGGGGGCGTGGCCGAAAGGATCGTAGATGATGTGAAGGAGTTCATCGGAAACCCCAAGTGGTACACAGACAGAGGCATCCCCTACAGAAGAGGATACCTGTTGTACGGCCCCCCAGGGTGTGGAAAAAGCAGCTTTATCACGGCACTGGCAGGCGAGCTGGGCTACAGCATCTGTCTGATGAGTCTGAGTGACCGCAGCCTTTCAGATGACCGTCTGAACCACCTCCTGAGCGTGGCACCGCAGCAAAGCATCATACTGCTGGAGGATGTAGATGCAGCCTTCGTCAGCCGAGACCTGACTCCCACAGAGAACCCTCTGGCCTACCAGGGAATGGGAAGACTGACCTTCAGCGGCCTGCTTAATTCTCTGGATGGAGTGGCCTCATCTGAGGCCAGAATAGTTTTTATGACCACCAACTTCATTGACAGGTTGGACGCAGCGCTGATCCGACCCGGCCGTGTGGATCTGAAGCAGTACATTGGGAATTGCACGCACTGGCAGCTTACACAGATGTTCCGGCGGTTCTACCCAGACGAGCCTGCCTCTGAGGGCGAGCGGTTCGCAGAGCGTGCGCTGGCCGTCCACTCGGAGATCAGCGCTGCCCAGGTGCAAGGACACTTTCTGCTGCACAAAATGGACCCCGCAGGATCTATAGACAATGTTGCCCAATTAATATAATGGCAGGACTGCAAGGTGGTTTGGAGACTGATTACTTAATAAAGAGAAAAATGTTTCCAGTTGAAGTTACGGTATTAATAGGACAGATGTGCATTGATGCCATGGACTGTATATGCAGTATATGATTGATACCAAATAAATACACGTAAAAAAATA
>XM_039818433.1
TGTCAAACACAGGAAGTGTAGTAGAGGTCGCTGCatgttaatatatatgtcaatgataaTAACCATAACGCACTATTGCAACACATCCATACATTGCACGCATGAGTATTTTAGTTGGTTGAACAGTGCTGTTTAGAAAGAAACGGTGTACACTGGAACCGATAGCCTCCAAGACAGCGGCATGAGATGGAGACATTGAAGGCAAGTCAGGTCTTTGCTCCTGCAAAGTGTTCCAACTATATAGTGTGATTCCACTGGGGGTGTGCAGATACCAGCAACATGCCCCTGTCAGACTTTCTGGACGGCCTGAAGGACAACCCATACTTCGGGGCTGGCTTTGGACTGGTTGGGGTTGGGACAGCGTTGGCCGTGGCCAGGAAAGGTGCCCAGGTGGGAATGATCTTCTTCCGCAGGAACTACATGATCACTCTGGAAGTTCCCAGCAGGGATAAGAGCTACCACTGGCTGCTGAGCTGGATCACCAAACACGCCAAGCACACCCAGCACCTGAGCGTGGAGACCTCCTACCTGGCACATGAGAGTGGACGGGTTCAGACACAGTTTGACTTCCACCCAAGCCCTGGGAACCACATCATCTGGTACGGGAGGCGGTGGATCAGGGTGGAGAGGACCAGAGAGAAGCAGATGGTGGATCTGCACACTGGAACCCCGTGGGAGTCCGTCACCTTCACTGCTTtaggcagagacagacagattttCTTTAATATCTTACAAGAAGCCAGAGAATTGGCCCTAAAGCAGGAAGAGGGACGGACAGTGATGTACACAGCCATGGGTGCTGAGTGGAGGCCCTTTGGGTTTCCACGGCGACGCAGACCTCTCAGCTCTGTGGTCCTGGAGGGGGGCGTGGCCGAAAGGATCGTAGATGATGTGAAGGAGTTCATCGGAAACCCCAAGTGGTACACAGACAGAGGCATCCCCTACAGAAGAGGATACCTGTTGTACGGCCCCCCAGGGTGTGGAAAAAGCAGCTTTATCACGGCACTGGCAGGCGAGCTGGGCTACAGCATCTGTCTGATGAGTCTGAGTGACCGCAGCCTTTCAGATGACCGTCTGAACCACCTCCTGAGCGTGGCACCGCAGCAAAGCATCATACTGCTGGAGGATGTAGATGCAGCCTTCGTCAGCCGAGACCTGACTCCCACAGAGAACCCTCTGGCCTACCAGGGAATGGGAAGACTGACCTTCAGCGGCCTGCTTAATTCTCTGGATGGAGTGGCCTCATCTGAGGCCAGAATAGTTTTTATGACCACCAACTTCATTGACAGGTTGGACGCAGCGCTGATCCGACCCGGCCGTGTGGATCTGAAGCAGTACATTGGGAATTGCACGCACTGGCAGCTTACACAGATGTTCCGGCGGTTCTACCCAGACGAGCCTGCCTCTGAGGGCGAGCGGTTCGCAGAGCGTGCGCTGGCCGTCCACTCGGAGATCAGCGCTGCCCAGGTGCAAGGACACTTTCTGCTGCACAAAATGGACCCCGCAGGATCTATAGACAATGTTGCCCAATTAATATAATGGCAGGACTGCAAGGTGGTTTGGAGACTGATTACTTAATAAAGAGAAAAATGTTTCCAGTTGAAGTTACGGTATTAATAGGACAGATGTGCATTGATGCCATGGACTGTATATGCAGTATATGATTGATACCAAATAAATACACGTAAAAAAATA

Function

NR:

description
PREDICTED: mitochondrial chaperone BCS1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0034551 mitochondrial respiratory chain complex III assembly biological_process
GO:0005524 ATP binding molecular_function
GO:0017111 nucleoside-triphosphatase activity molecular_function

KEGG:

id description
K08900 BCS1; mitochondrial chaperone BCS1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818432.1 False 1686 mRNA 0.52 8 5289083 5296603
XM_039818433.1 True 1695 mRNA 0.52 8 5289083 5296603

Neighbor

gene id symbol gene type direction distance location
LOC120570455 plcd4,LOC103372476 coding upstream 23175 5244138 ~ 5265908 (+)
cnot9 cnot9,LOC103372475,LOC106524050 coding upstream 46211 5232370 ~ 5242872 (+)
LOC120569312 NA coding upstream 163696 5119138 ~ 5125387 (+)
LOC120570421 lss,LOC104947466 coding upstream 173378 5114326 ~ 5115705 (+)
pms1 pms1 coding upstream 257195 5001871 ~ 5031888 (+)
tns1b tns1 coding downstream 7963 5304566 ~ 5552162 (+)
LOC120570043 NA coding downstream 270823 5567426 ~ 5570358 (+)
LOC120569854 LOC103364251,LOC104945362,LOC101061545 coding downstream 626091 5922694 ~ 5937121 (+)
LOC120569363 NA coding downstream 705238 6001841 ~ 6009742 (+)
col5a2a col5a2,LOC103365627 coding downstream 851969 6148572 ~ 6228385 (+)
G122317 NA non-coding upstream 938 5287474 ~ 5288145 (+)
G122266 usp37 non-coding upstream 72134 5215800 ~ 5216949 (+)
G122235 NA non-coding upstream 115852 5118038 ~ 5173231 (+)
G122224 NA non-coding upstream 135533 5095927 ~ 5153550 (+)
G122225 NA non-coding upstream 136200 5094624 ~ 5152883 (+)
G122319 NA non-coding downstream 51 5296654 ~ 5297055 (+)
G122320 NA non-coding downstream 532 5297135 ~ 5298605 (+)
G122321 NA non-coding downstream 2271 5298874 ~ 5299221 (+)
G122349 NA non-coding downstream 264199 5560802 ~ 5561861 (+)
LOC120569309 NA non-coding downstream 268638 5565241 ~ 5566728 (+)
ybey ybey other upstream 77181 5209102 ~ 5211902 (+)
G122226 NA other upstream 123185 5164233 ~ 5165898 (+)
LOC120569936 LOC102781033,LOC104920804 other upstream 218835 5060001 ~ 5070248 (+)
fkbp7 fkbp7,LOC102196462,LOC104949636 other upstream 306104 4974789 ~ 4982979 (+)
G122128 NA other upstream 393581 4894785 ~ 4895502 (+)
G122588 NA other downstream 1850022 7146625 ~ 7149039 (+)
hdac4 LOC103356262 other downstream 2874097 8170700 ~ 8316693 (+)
G122846 NA other downstream 3498850 8795453 ~ 8796746 (+)
umps umps other downstream 4624021 9920624 ~ 9928891 (+)
lrp1bb lrp1b,LOC102779748 other downstream 5039388 10335991 ~ 10618696 (+)

Expression


Co-expression Network