LOC120570204


Basic Information

Item Value
gene id LOC120570204
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 18603123 ~ 18605171 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818434.1
AATGGCGCATGGCACAGGCACAATGTCATTCTGTCCTGACGCAGGAAATAACTCATGATCCTGTTTACCACCGAGTTGacttttaatgtgttttgtgCTTCTACCCAACTGAGTGGACACTACCTGGTTTAATTTAGTGATTTCAGAAATGAGGAAACGTCTGATCCAAATATTTGGCTTCTTGATTTCATCACTGGGATGGCTGTTTGTGCTGTGCACCATTGGAATGGACTTTTGGAAGGTCTCTCAAATAGGAGGACAAGGAGGCCCATTTGTTATCAAAGTGGCCTGGTATGCGTCCAGCCTGTGGAAGGATTGTTACACAGATGCCACGTCTGTCATCACCTGTAGAGACTTCCCTGTGGTCCGGAATGTCACACCTTTAATACAGGGAGTACGAGGATTGCTGCTATGCGGGTTAGTTCTTGGATTCATTGGTGTAGTACTTTGCTTTGTTGGGATGGAGTGCACTTATATTGGTGGAGCTGATAATACCAAGGACAAACTGCTTTTTGCCGGAGCAGTGTTTCATATTGTTGGAGGTGTGTCAGATGTTTCTGCCTACTGCTTATACATCAACAGGATTaacagaaaaacatttcatgCCACTTTTGGGACAGGAGAGATACGGTATGACCTAGGAACTCCCATATTTCTAGGATTGGTGGGATGTTTTTTGATCCTTTTAGGTGCTGTGTCATACGCTGTTACAGTCTATCGAGTACTTTGCCCTGGAAGtaaagtggaTTATGCCTATGGAGGAGGCACGTACATGGCCCCTCGCTCCAGAGGAAGAACGCTGTACACCGGATACTACAAACCCTCCAGGCAGAATGGATCTTATATGGGCTCAGGGCCATCCACCATTTCCAAAATCTCAAAGCTCTCTCAGACAAGACCCATGAAAATGTCAGAAAGAGATGCATTTGTGTAGTAGCTCAAAGCTCCATGTAGTTTTGTTTtaacaaaaaacggaaaaacacaacaagacaaAGTAGCTTCAAGTGTGATTAACTATCAATTGGCATATTGCATACTGTAGATAGGATGGAAAAAAACCTTCACCGTTTCAGTGCACCATGTACAattataatttgtttttgttgttgttgttgttgttgttgttgttgtggtttccATGCtcttgtcatgtttttttggtAAAACAGGTCATAAAATA

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0005923 bicellular tight junction cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005198 structural molecule activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818434.1 True 1180 mRNA 0.43 5 18603123 18605171

Neighbor

gene id symbol gene type direction distance location
LOC120569518 LOC101478235,LOC102203487,LOC102783581,LOC104922687,LOC104947508 coding downstream 1741 18599472 ~ 18601382 (-)
dnajc3a dnajc3 coding downstream 4668 18581236 ~ 18598455 (-)
hs6st3b hs6st3,LOC101476457 coding downstream 67685 18466925 ~ 18535438 (-)
LOC120569776 mbnl2,LOC104947512,LOC102785098,LOC101474989,LOC104922684,LOC107389970,LOC102200241 coding downstream 144006 18442534 ~ 18459117 (-)
LOC120570503 rap2a,LOC106512668,LOC101166017,LOC103391592,LOC106582448,LOC105907999,LOC105933629,LOC103043765,LOC100332969 coding downstream 161751 18428988 ~ 18441372 (-)
LOC120570238 cldn10,LOC103391834,LOC104947506 coding upstream 1255 18606426 ~ 18608814 (-)
gpc6b gpc6,LOC104947503 coding upstream 99517 18704688 ~ 18789294 (-)
slitrk5b slitrk5,LOC100690770 coding upstream 244118 18849289 ~ 18852790 (-)
LOC120569248 LOC102780588,LOC100690496,LOC101481378,LOC102206814,LOC103352953 coding upstream 267892 18873063 ~ 18885787 (-)
pcdh8 LOC104947529,LOC103352945 coding upstream 293505 18898676 ~ 18903097 (-)
LOC120569840 NA non-coding downstream 391167 18208738 ~ 18211956 (-)
G125000 NA non-coding downstream 510593 18092327 ~ 18092530 (-)
G124872 NA non-coding downstream 579646 18022409 ~ 18023477 (-)
LOC120569506 NA non-coding downstream 780636 17737284 ~ 17822487 (-)
G124691 NA non-coding downstream 1252377 17347911 ~ 17350746 (-)
LOC120570508 NA non-coding upstream 210675 18815846 ~ 18819321 (-)
G125108 NA non-coding upstream 222371 18827542 ~ 18828502 (-)
G125112 NA non-coding upstream 238929 18844100 ~ 18844338 (-)
G125113 NA non-coding upstream 239375 18844546 ~ 18845295 (-)
G125116 NA non-coding upstream 240661 18845832 ~ 18847369 (-)
prkra prkra other downstream 439374 18156732 ~ 18163749 (-)
LOC120569287 LOC103391581,LOC104924425,LOC103375901 other downstream 488026 18113110 ~ 18115097 (-)
fastkd1 fastkd1,LOC102780871 other downstream 1560751 17035373 ~ 17042372 (-)
LOC120570068 LOC103362129,LOC101485094 other downstream 2213229 16381250 ~ 16389894 (-)
gcgb gcg other downstream 2222358 16378488 ~ 16380765 (-)
G125089 dct,LOC102781940 other upstream 90309 18695480 ~ 18699802 (-)
G125090 NA other upstream 95716 18700887 ~ 18704677 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other upstream 626816 19231987 ~ 19258846 (-)
G125326 dopey2 other upstream 990758 19595929 ~ 19597521 (-)
si:ch211-214p13.3 NA other upstream 1146530 19751701 ~ 19768586 (-)

Expression


Co-expression Network