ednrbb (LOC103352943,LOC104947527)


Basic Information

Item Value
gene id ednrbb
gene name LOC103352943,LOC104947527
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 18943351 ~ 18947075 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818435.1
TTCGGGGCCTTTTGAGGAAATCATCAACAATGTGGACCGTTGCTCTCGTTCTTTGTTTGGGAAATATTCTCATCACAGGAGAGGCCAGTGATCAGCATTCAGAACCTTTCTCTGTAATTGAACTCTCTGAAACCGCCTCCCCTGGTCTTTTAATACTGGATAAACAGAAATCCAACAGCTCAATTCATCCACCTCATGTAGCAGGACCGAAAACCCAACACCCTCCTATGTGCTtggagtcagctggaatcagagacACCTTCAAATATATCCATACTGTGGTGTCTGTtgcagtttttgttgttggaaTAGTGGGCAATTCAACCTTACTGAAAATCATATATGTAAACAAATGCATGAGAAGTGGACCAAACATTCTCATTGCGAGTCTTGCGCTGGGGGATCTAATCCACATTGTGATAGACATTCCAATCAACGCATACAGGctcatgGCAGAAGATTGGCCATTTGGCTTGGTGCTGTGCAAACTTGTCCCCTTCATACAGAAAACCACAGTTGGAATTACTGTGTTGAGCTTATGTGCTTTAAGTGTTGACAGATACCGAGCTGTAGTATCCTGGAATCGAATCAAAGGCATCGGGGTTCCATTTTGGACAGCAATCGAAATAACTCTGATTTGGGTTATTTCTATCCTGTTGGCTGTCCCTGAAGTTGTCGGCTTTGATATGATAACAATGGACTATAAAGACAAGCATCTGAGAATTTGTCTGCTTCATCCCATGCAAACCACACCGTTCATGCAGttttataaatcagtAAAGGACTGGTGGCTCTTTGGCTTCTACTTTTGCATGCCACTGGCTTGGACTGCTGTCTTCTACGCACTCATGACCAGGAAAATGCTAAGGAATACCGATAATACAATAAGTGACCACACCAAGCAGaGACGGGAAGTTGCGAAAACCGTATTCTGCCTGGTGATTGTGTTTGCACTTTGCTGGTTGCCTCTATACCTAAGTAGAATCTTGAAATTAACCATATACGATGAGACAGATCCTAATAGGTGTCAACTACTGAGTGTCTTTCTTGTCATGGACTATTTTGGCATTAATATGGCATCACTCAACTCGTGCATCAACCCTATTGCATTGTACACAGTCAGCAAGAGATTTAAAGGATGTTTCAAGGCATGTCTGTGCAGTCGGTGTCTACCTCTTCCAGCTGTTCCCCATGATGAGGCACAGTCTGTTTTAAAGTCCAGAACGCAGGATCAAGCCTCATAGCAGAGCTGCAACTTCAAAGCTCACAAGCAGACTTCCACACCTCTATCTGAGCAGGAGAACACCTTACTTACTGTGTTAACAAAACTCAGTGAAAATACATTGTGAGTGCTTTGGTATAtctttattaaatatatatatatatatatggctatCAAAGCAGCTACCAAAACATCGATAGCTCAGTAACCTTGACATGCCACCTAATACTATAAAATACTTGTAAATGTGAATTACATGCAGCACTATCTTTTGTACTGTTGTTGTCAGTTGAACATCTGCTTTAGTATGAGCAACCTGGAGTCAGACTGTTCTGACTATTTGCCTCCAGGGCTTGACTCACTCCCAACCATTACATCAGATTTTACCTAGTACCTATCCTGTATCATGCATGCAGTTCTCAAATCACTGTTTTGGGCACGATGTTAACCTGGCACCCATCAACAGAAATCTTGTCACAGCTTACCGCCTGCATATGTATTATTTTGATTCGGTTTCTGGATTCTGGAAAGACACTGTGCCATACGAAATCAAGCAAATTGGAATTCAAAATTACGACGGTGTGTTTTATGGGCTACGGTGTATTATTAGCAcatacatgtgttttttttttttttatctatgttGAGTTTCCCCATACACAAAGAGTTTATAGTGTTCCTTTTCGTTCTTGAATCTTGAGAAACTTATAAAATTGGTGCCACAAGTAGATTCTGTCTCCGCCACTGAATGACTGATTGATGGTGGCCTATTTTTAATGCATTGTTAAATGTGTAATGCATGGAGACACTTTATAAAAGACCTGAGAGTGGGGAAGAAGGAAAACGAAGATGACAG

Function

NR:

description
PREDICTED: endothelin B receptor-like

GO:

id name namespace
GO:0086100 endothelin receptor signaling pathway biological_process
GO:0048484 enteric nervous system development biological_process
GO:0008217 regulation of blood pressure biological_process
GO:0042310 vasoconstriction biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004962 endothelin receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818435.1 True 2078 mRNA 0.41 7 18943351 18947075

Neighbor

gene id symbol gene type direction distance location
pcdh8 LOC104947529,LOC103352945 coding downstream 40254 18898676 ~ 18903097 (-)
LOC120569248 LOC102780588,LOC100690496,LOC101481378,LOC102206814,LOC103352953 coding downstream 57564 18873063 ~ 18885787 (-)
slitrk5b slitrk5,LOC100690770 coding downstream 90561 18849289 ~ 18852790 (-)
gpc6b gpc6,LOC104947503 coding downstream 154057 18704688 ~ 18789294 (-)
LOC120570238 cldn10,LOC103391834,LOC104947506 coding downstream 334537 18606426 ~ 18608814 (-)
cog3 cog3,LOC102779731 coding upstream 15214 18962289 ~ 18975007 (-)
mid1 LOC103352941,LOC100711508,LOC102207649,LOC102290384 coding upstream 30137 18977212 ~ 19004027 (-)
LOC120570505 LOC104947492,LOC103352939 coding upstream 63752 19010827 ~ 19033189 (-)
trappc2 trappc2 coding upstream 169500 19116575 ~ 19118587 (-)
gpm6bb gpm6b,LOC100694635 coding upstream 181149 19128224 ~ 19158065 (-)
G125116 NA non-coding downstream 95982 18845832 ~ 18847369 (-)
G125113 NA non-coding downstream 98056 18844546 ~ 18845295 (-)
G125112 NA non-coding downstream 99013 18844100 ~ 18844338 (-)
G125108 NA non-coding downstream 114849 18827542 ~ 18828502 (-)
LOC120570508 NA non-coding downstream 124030 18815846 ~ 18819321 (-)
G125173 frmpd4,LOC100710969,LOC102314130 non-coding upstream 126160 19073235 ~ 19076766 (-)
G125178 NA non-coding upstream 142427 19089502 ~ 19090779 (-)
LOC120569517 NA non-coding upstream 161225 19108300 ~ 19113781 (-)
G125227 NA non-coding upstream 254671 19201746 ~ 19205941 (-)
G125293 LOC103392014,LOC104967650 non-coding upstream 484989 19432064 ~ 19432431 (-)
G125090 NA other downstream 238674 18700887 ~ 18704677 (-)
G125089 dct,LOC102781940 other downstream 243549 18695480 ~ 18699802 (-)
prkra prkra other downstream 779602 18156732 ~ 18163749 (-)
LOC120569287 LOC103391581,LOC104924425,LOC103375901 other downstream 828254 18113110 ~ 18115097 (-)
fastkd1 fastkd1,LOC102780871 other downstream 1900979 17035373 ~ 17042372 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other upstream 284912 19231987 ~ 19258846 (-)
G125326 dopey2 other upstream 648854 19595929 ~ 19597521 (-)
si:ch211-214p13.3 NA other upstream 804626 19751701 ~ 19768586 (-)
LOC120570223 NA other upstream 842977 19790052 ~ 19796220 (-)
si:ch211-214p13.7 NA other upstream 974193 19921268 ~ 19923735 (-)

Expression


Co-expression Network