mettl5 (mettl5,LOC102779255)


Basic Information

Item Value
gene id mettl5
gene name mettl5,LOC102779255
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 17074358 ~ 17078125 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818480.1
AATGTTTTGGATGATGCACGCATTGTTAAGGAAGTTGTCTTCAACCATGCTCAAAATAAAACTCCTGTCTATTTTAGTTGAAGAATAACGGTTTTAAACAACACATCGGGGTTGTCGCACAGCGTGCACACAGGTTTGGGTCATCATAGTCGCTAGTAATGAAACTAAAAGAGTTAGAGAGTTGGCTACAGCAAGTGGACGCGTTTGAAGAGCCAAAAATTCTTCTTGAGCAATATCCAACCAGTCCTCATATTGCTGcatgCATGCTTTATACAATCCAAAACACGTTTAATGACATTGAGGGTAAACTAGTGGCAGATCTGGGATGTGGCTGTGGAGTCTTGAGCATCGGGGCTGCGATGCTTGCTGCAGGtttgTGCGTCGGCTTCGACATTGACAACGATGCACTGGACATATTCAGAAGAAATGCAGAGGAATTTGAAATTTCTAACGTGGATCTGGTCCAGTGTGACCTGTGTTCTCTGGAGGCAGAGGCTTATGCCAAAAAGTTTGACACCGTAATAATGAATCCACCATTTGGGACAAAACACAACCAAGgcATGGACATGAAGTTCTTGTGGGCTGCTATAACAATGGCAAAGACAGCAGTGTATTCACTCCATAAAACATCAACACGAGAGCACATACAAAAGAAGGCTAATGACTGGGGAGTGAAAATGGAAGTAATAGCAGAACTAAGATATGACTTGCCAGCATCTTACAAGTTCCACAAAAAGAAGTCGATCTTGAGCGGACGTTGTTTCTCAATCAAAACACAGCATTTGTCCACTGCAGATACATTTTAAACCAAGAAGCAGTACAACCTACCTGGATAACACAAGC
>XM_039818481.1
ATGTTTTGGATGATGCACGCATTGTTAAGGAAGTTGTCTTCAACCATGCTCAAAATAAAACTCCTGTCTATTTTAGTTGAAGAATAACGGTTTTAAACAACACATCGGGGTTGTCGCACAGCGTGCACACAGGTTTGGGTCATCATAGTCGCTAGTAATGAAACTAAAAGAGTTAGAGAGTTGGCTACAGCAAGTGGACGCGTTTGAAGAGCCAAAAATTCTTCTTGAGCAATATCCAACCAGTCCTCATATTGCTGcatgCATGCTTTATACAATCCAAAACACGTTTAATGACATTGAGGGTAAACTAGTGGCAGATCTGGGATGTGGCTGTGGAGTCTTGAGCATCGGGGCTGCGATGCTTGCTGCAGGtttgTGCGTCGGCTTCGACATTGACAACGATGCACTGGACATATTCAGAAGAAATGCAGAGGAATTTGAAATTTCTAACGTGGATCTGGTCCAGTGTGACCTGTGTTCTCTGGAGGCAGAGGCTTATGCCAAAAAGTTTGACACCGTAATAATGAATCCACCATTTGGGACAAAACACAACCAAGgcATGGACATGAAGTTCTTGTGGGCTGCTATAACAATGGCAAAGACAGCAGTGTATTCACTCCATAAAACATCAACACGAGAGCACATACAAAAGAAGGCTAATGACTGGGGAGTGAAAATGGAAGTAATAGCAGAACTAAGATATGACTTGCCAGCATCTTACAAGTTCCACAAAAAGAAGTCGGTTGACATCCAGGTGGACTTCCTACGATTCTCCAAAGCCTGAAGCTGTCACTGGAATGGATTTAATTGCCTCTGCATTCTCAAGGTTTATAATAAATGTTTTCACAAAAGAAAAA
>XM_039818482.1
AATGTTTTGGATGATGCACGCATTGTTAAGGAAGTTGTCTTCAACCATGCTCAAAATAAAACTCCTGTCTATTTTAGTTGAAGAATAACGGTTTTAAACAACACATCGGGGTTGTCGCACAGCGTGCACACAGGTTTGGGTCATCATAGTCGCTAGTAATGAAACTAAAAGAGTTAGAGAGTTGGCTACAGCAAGTGGACGCGTTTGAAGAGCCAAAAATTCTTCTTGAGCAATATCCAACCAGTCCTCATATTGCTGcatgCATGCTTTATACAATCCAAAACACGTTTAATGACATTGAGGGTAAACTAGTGGCAGATCTGGGATGTGGCTGTGGAGTCTTGAGCATCGGGGCTGCGATGCTTGCTGCAGGtttgTGCGTCGGCTTCGACATTGACAACGATGCACTGGACATATTCAGAAGAAATGCAGAGGAATTTGAAATTTCTAACGTGGATCTGGTCCAGTGTGACCTGTGTTCTCTGGAGGCAGAGGCTTATGCCAAAAAGTTTGACACCGTAATAATGAATCCACCATTTGGGACAAAACACAACCAAGgcATGGACATGAAGTTCTTGTGGGCTGCTATAACAATGGCAAAGACAGCAGTGTATTCACTCCATAAAACATCAACACGAGAGATCTTGAGCGGACGTTGTTTCTCAATCAAAACACAGCATTTGTCCACTGCAGATACATTTTAAACCAAGAAGCAGTACAACCTACCTGGATAACACAAGCATCTCGTTGTCTTTGA

Function

symbol description
mettl5 Predicted to enable S-adenosyl-L-methionine binding activity and rRNA (adenine-N6-)-methyltransferase activity. Predicted to be involved in positive regulation of translation; rRNA methylation; and stem cell differentiation. Predicted to act upstream of or within methylation. Predicted to be located in nucleus; postsynapse; and presynapse. Used to study autosomal recessive intellectual developmental disorder-72. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder-72. Orthologous to human METTL5 (methyltransferase 5, N6-adenosine).

NR:

description
methyltransferase-like protein 5

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818480.1 False 843 mRNA 0.43 7 17074374 17078125
XM_039818481.1 True 857 mRNA 0.42 7 17075882 17078124
XM_039818482.1 False 757 mRNA 0.43 5 17074358 17078125

Neighbor

gene id symbol gene type direction distance location
ccdc173 NA coding downstream 16047 17049924 ~ 17058311 (-)
LOC120570071 lrp2 coding downstream 89219 16974305 ~ 16985139 (-)
lrp2a lrp2 coding downstream 98191 16938250 ~ 16976167 (-)
abcb11a abcb11,LOC102784145 coding downstream 169218 16895676 ~ 16905140 (-)
spc25 NA coding downstream 182684 16887828 ~ 16891674 (-)
tlk1a tlk1 coding upstream 172257 17250382 ~ 17271042 (-)
mettl8 mettl8 coding upstream 193615 17271740 ~ 17277883 (-)
slc25a12 slc25a12,LOC102297988 coding upstream 226646 17304771 ~ 17324588 (-)
dlx2a dlx2,LOC102799862 coding upstream 306638 17384763 ~ 17386999 (-)
nup62l nup62,LOC104948257 coding upstream 343742 17421867 ~ 17424329 (-)
G124590 phgdh,LOC102779828 non-coding downstream 8821 17062706 ~ 17065537 (-)
G124588 NA non-coding downstream 14068 17057779 ~ 17060290 (-)
G124561 NA non-coding downstream 47168 17026334 ~ 17027190 (-)
G124539 LOC100705499,LOC104961141,LOC102783488,LOC107082002,LOC103461718 non-coding downstream 142892 16910171 ~ 16931466 (-)
G124503 NA non-coding downstream 190184 16883434 ~ 16884174 (-)
G124601 ubr3 non-coding upstream 16318 17094443 ~ 17099028 (-)
G124606 NA non-coding upstream 46756 17124881 ~ 17127544 (-)
G124612 myo3b non-coding upstream 98031 17176156 ~ 17180098 (-)
G124679 NA non-coding upstream 149774 17227899 ~ 17230116 (-)
G124673 NA non-coding upstream 170244 17248369 ~ 17338260 (-)
fastkd1 fastkd1,LOC102780871 other downstream 31986 17035373 ~ 17042372 (-)
LOC120570068 LOC103362129,LOC101485094 other downstream 684464 16381250 ~ 16389894 (-)
gcgb gcg other downstream 693593 16378488 ~ 16380765 (-)
LOC120570587 LOC100705152,LOC102292123,LOC101476258 other downstream 851622 16207690 ~ 16222736 (-)
G124303 dapl1 other downstream 972765 16099278 ~ 16101593 (-)
LOC120569287 LOC103391581,LOC104924425,LOC103375901 other upstream 1034985 18113110 ~ 18115097 (-)
prkra prkra other upstream 1078607 18156732 ~ 18163749 (-)
G125089 dct,LOC102781940 other upstream 1617355 18695480 ~ 18699802 (-)
G125090 NA other upstream 1622762 18700887 ~ 18704677 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other upstream 2153862 19231987 ~ 19258846 (-)

Expression


Co-expression Network