dlx2a (dlx2,LOC102799862)


Basic Information

Item Value
gene id dlx2a
gene name dlx2,LOC102799862
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 17384763 ~ 17386999 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818549.1
ACCGAAGCAGATAATCACAGACCACTGTGAGAGGGACACACCTCCGCTGATTTTCCCACAGTTTACACGGGGATGCGTTTCGATTCACGAAAAGGTGTCATCAGTCCAAGATTTTGAGTCGTGTTTCAGCTTTTTTGCGCATAGGTTACGAGGGTGCTCCACTCCAACTCGAAGATGACTGGGGTTTTTGAGAACTTAAATACTGATATGCATTCAAACCAGATTACCTCAAGCAGTTACCACAGCTTGCACAAATCGCAGGAGTCTCCGACTCTGCCAGTGTCCACGGCGACGGACAGCAGCTATTACAACAGCCAACAGCCTGGCCATTGCGCAGGGTCTCCATTTGGCCAACTCGGCTCTTACCAGTACCACGGCAACGCCACGAGCACTGTGCCATATAACGCAAAGTCATACGACCTTGGTTTCAACTCATCTTATGGTGCATACAGCTCCTACGGCTCCAACTCCTCTCCTACTCCAGCAGATACAGAGAAAGAAGAGCGCGAGCCAGAAATCCGGATGGTTAATGGAAAACCAAAGAAGGTCAGGAAACCTCGAACCATTTATTCCAGCTTTCAACTGGCCGCACTTCAACGGAGGTTTCAAAAGACGCAGTATTTGGCTCTACCAGAACGGGCCGAGCTGGCAGCCTCGATGGGCCTTACGCAAACACAGGTCAAAATCTGGTTCCAAAACCGCCGCTCCAAGTTCAAGAAGTTGTGGAAAAGTGGAGAAATCCCTCCAGAGCAACACGTTGCTTCCAGTGAATCTCCCCCCTGCACGTCTCCACCAACTATTGCCTGGGACTTTCCACAGACTCAAAGAATGAACAGTGTCAACTCCAGTTTACCTCAGAGCAGCAGCCCTCCCAACACGACTGCGTTTTTGGCAAACTACTCCTGGTACTCTACCACGAACTCTACGACGCATCTGCAGCCTCTGATCCAGCACCACCACAACTCCGCCATAAGCGCTGGGACAATATtctgaaacaaacaacaacaaaacatcgGGTTTAAATCGGAAAATActggtgaaaaaaaagaaaaatgccaaTACCTTCATGTTACAGACCTCGTTTGTGCGTCATGCGAAGTTGCAAGCATATAGAAGTTAATGGAGCCAGACAGGCTCATGGGCCTTGCCAGTTTTCGCGCTGGCAAATGGTAGTTACAGATTTCTAcagttatttttgtatttatttattttgtttatgtcGAGGGGTGAATGAACCACTATTACCCAAAGCAATCACAGCCTGGGCGCAAGCCTACTTTTACGCGGACGTCACTTTTTTGCCATttctgcaaaaacaaaacattcatcgcaggACAACCTGTCACAAATGTAGCACAAGTTAACGGTATCGTGCCTTTTTCAATATGACCTCATTTTGTTGTGCGATAAAACAGCGTAGGCTACCTTTATTCATTCCTTATGCCATTAGGCTAGTTGATTTGACTATAGGCCTAAGTGTCTGAATCTACGTTTGTAAATATTTTACCACAGCTTTTTGATAGCACTCTTTTTTTAGGCTATTGGTGCAAATTAACCACCATTAACCACCGTAAGCTACTGATTGTCCTACCCTCTGATTTACTTGTATCACAGTTAATTGtatttttgtcttatttatttTAGCAGTGTTCCATATATGACCAGacgttatttaaataaaaatgttttctgtgaATATA

Function

symbol description
dlx2 Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in cell differentiation; negative regulation of transcription by RNA polymerase II; and regulation of neuron differentiation. Predicted to act upstream of or within several processes, including negative regulation of Notch signaling pathway; nervous system development; and skeletal system development. Predicted to be located in nucleus. Predicted to be part of chromatin.

NR:

description
homeobox protein DLX-2

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000976 transcription regulatory region sequence-specific DNA binding molecular_function

KEGG:

id description
K18488 DLX2; homeobox protein DLX2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818549.1 True 1700 mRNA 0.45 3 17384763 17386999

Neighbor

gene id symbol gene type direction distance location
slc25a12 slc25a12,LOC102297988 coding downstream 60175 17304771 ~ 17324588 (-)
mettl8 mettl8 coding downstream 106880 17271740 ~ 17277883 (-)
tlk1a tlk1 coding downstream 113721 17250382 ~ 17271042 (-)
mettl5 mettl5,LOC102779255 coding downstream 306638 17074358 ~ 17078125 (-)
ccdc173 NA coding downstream 326452 17049924 ~ 17058311 (-)
nup62l nup62,LOC104948257 coding upstream 34868 17421867 ~ 17424329 (-)
ppp1r9ala NA coding upstream 45591 17432590 ~ 17458368 (-)
sp3a sp3 coding upstream 180418 17567417 ~ 17575561 (-)
LOC120569548 ola1,LOC100700376 coding upstream 194471 17581470 ~ 17629519 (-)
cir1 cir1 coding upstream 249800 17636799 ~ 17642646 (-)
G124691 NA non-coding downstream 34017 17347911 ~ 17350746 (-)
G124673 NA non-coding downstream 46503 17248369 ~ 17338260 (-)
G124695 NA non-coding downstream 90123 17291927 ~ 17294640 (-)
G124693 NA non-coding downstream 94325 17287949 ~ 17290438 (-)
G124679 NA non-coding downstream 154647 17227899 ~ 17230116 (-)
LOC120569506 NA non-coding upstream 350285 17737284 ~ 17822487 (-)
G124872 NA non-coding upstream 635410 18022409 ~ 18023477 (-)
G125000 NA non-coding upstream 705328 18092327 ~ 18092530 (-)
LOC120569840 NA non-coding upstream 821739 18208738 ~ 18211956 (-)
LOC120570508 NA non-coding upstream 1428847 18815846 ~ 18819321 (-)
fastkd1 fastkd1,LOC102780871 other downstream 342391 17035373 ~ 17042372 (-)
LOC120570068 LOC103362129,LOC101485094 other downstream 994869 16381250 ~ 16389894 (-)
gcgb gcg other downstream 1003998 16378488 ~ 16380765 (-)
LOC120570587 LOC100705152,LOC102292123,LOC101476258 other downstream 1162027 16207690 ~ 16222736 (-)
G124303 dapl1 other downstream 1283170 16099278 ~ 16101593 (-)
LOC120569287 LOC103391581,LOC104924425,LOC103375901 other upstream 726111 18113110 ~ 18115097 (-)
prkra prkra other upstream 769733 18156732 ~ 18163749 (-)
G125089 dct,LOC102781940 other upstream 1308481 18695480 ~ 18699802 (-)
G125090 NA other upstream 1313888 18700887 ~ 18704677 (-)
tbl1x LOC103352926,LOC104925011,LOC102307724 other upstream 1844988 19231987 ~ 19258846 (-)

Expression


Co-expression Network