LOC120570301 (LOC104966043,LOC103353981)


Basic Information

Item Value
gene id LOC120570301
gene name LOC104966043,LOC103353981
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 11928001 ~ 11931566 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818574.1
TGGAATCTGCACGGAGTGAGACGAGCTGCGAGCCTCTGGACTTCCAACCGCTCAGCATGCGAACTGACGCTCTGTGTGAATTCAAGTCGAAAAAAGATGGAGATATAACCTTTTTTAAGCTTTAAACTTTTCTTGTTTTGTGCTAAAGTGACAACGCTTACGTGTTAGACACGTTGGAATAACTTGGGTTTGCATTACTTCAAGAAAATGGGACTTTAAGTGGTATTTTCACCGGGTCGGGAGTGAGAGTGGGCTGCTTGGAGTCACTTACAAAGACCATCAAGAAGTCATGACACGACGAACGTTTAACTTGGATTTAACTTCATAAAATACGAGGAAAAACGGTCGCAGCAATTTGAACTCGAAGCACTCGGATTACAGGCTAACGTGGTGCGACAATTAATGTAGATTTCTTCGCTTTTTAACAGTTTTCAAGTCGCCCTACTTGGATCAAAGTTTTTTccttccctccccccctcctcctcaactATGGCGGCGGCCAGGTCCACCACTGGCTCAGTGTTGCTGCGGATCATGTGGCTGGTGTGCGGGTTGTCCTTCTCATCCACTTCTGCTCAACATTACAACAGTGAGAGTGGGATTTCTATCCCAGAACACGGGTTCTGCCAGCCCATCTCTATCCCGCTTTGCACCGACATCGCCTACAACCAGACCATCATGCCGAACCTCCTGGGCCACACGAACCAGGAGGACGCCGGACTAGAGGTGCACCAGTTCTACCCTCTGGTTAAGGTCCAGTGTTCTGCTGACCTAAAGTTCTTCCTCTGCTCCATGTATGCACCAGTCTGCACAGTGCTGGAGCAGGCCATCCCCCCTTGTCGGTCCCTGTGTGAGCGTGCACGGCAGGGATGTGAAGCCCTCATGAATAAGTTCGGCTTCCAGTGGCCAGAGCGGCTCCGCTGCGAGGCTTTCCCCGTCCACGGAGCCGGTGAGATCTGCGTCGGTCAGAACACGTCCGAACCCAGCGGCCCGGCCTCGTCTTCCCCCTATGCACCCGATGCTGCGACCCTTCCCCCAAACATAGGCCGACCCAACCCACGCCCGCCCCAGCACAACCAGTACCACCAGTTCTCCTGCCCTCTACAGCTGGAGGTGCCTACGTACCTGGGCTACCGATTTATGGGGGTCAACGACTGCGGGGCCCCATGTGAGCCCACTAAACCCACCGGGATCATGTATTTCCGGGAGGATGAGGTCAAATTCGGCCGGCTATGGGTTGGAATCTGGTCCATTCTGTGCTGCGTGAGCACCTTATTCACAGTGCTCACATATTTAGTGGACATGAGGCGGTTCAGGTACCCCGAGAGGCCCATCATCTTCTTATCTGGGTGCTATTTTATGGTGGCGGTAGCCTACGCTGCTGGATTTTTCCTGGAGGACAAAGTTGTTTGCGTGGATAAATTCAAGGAAGACGGCTACAGGACAGTGGCTCAGGGGACTAAAAAGGAGGGCTGCACCATCCTCTTCATGGTGTTGTACTTTTTTGGTATGGCCAGCTCCATCTGGTGGGTGATTTTGTCCCTGACTTGGTTCCTCTCTGCCGGGATGAAATGGGGCCATGAGGCGATTGAAGCCAACTCCCAGTACTTCCACCTGGCCGCTTGGGCTGTCCCGGCCATCAAAACCATCACCATCCTTGCCATGGGCCAGGTGGACGGCGACGTCCTGACCGGGGTGTGTTTCGTTGGGATCTTCAACGTGGACGCCCTCCGCGGCTTCGTCCTGGCTCCGCTTTTTGTCTACCTGTTCATCGGTACATCCTTCCTCCTGGCCGGCTTTGTGTCCCTCTTTCGGATCCGCACCATCATGAAGCACGACGGTACCAAGACGGAGAAGCTGGAGAAGTTGATGGTGCGGATCGGCGTGTTCAGTGTGCTCTACACGGTACCGGCCACCATAGTGATCGCCTGTTACTTCTACGAGCAGGCCTTTAGGGAGCACTGGCAGCGGACCTGGCACATGCAGACATGCAAGCGGTTCGCCGTACCCTGCCCGGTTCACAACTTCGCCCCCATGACTCCAGACTTCACCGTGTTCATGATCAAATACCTGATGACCATGATCGTCGGCATCACTTCGGGTTTCTGGGTCTGGTCCGGCAAGACTCTCCAATCATGGCGGAGTTTCTACAAGCGCCTTAGCAACGGTAACCATGGAGAGACAACGGTGTAAAGTTTCGAGGAAGAAAAGGCACAAAGCCACGGGGTTTTGGATACAATAACCATGTAAATGAGGTCAAATAGCTTTCCTTTTTAATActattttggagaaaaaaatttTCACATGTGTCTTCAGGTTGTGACAGCAATTCAGGCTTTTGGACACACAACCAAACTTTAATCTATATTCGATAGAAGTTGGatgatttttaaatatatttccttttttttgtcgTTATCAGCCCACACTCCTGGCTTTTGCATCTTTGGATTATAAACTGGTGTGAATTGCCATACTGGTCCCTGGACTGTAATGCCTGACTGGAGAGGGTTTCTTTTAATATGAAACTTCCTACATATTATTGAATATATCCTATTACAATTTGAATGTACATCCTGTCTACTTCAGTGAGAGTTTTTCAGTGGAAAACACCATAACAGAAAAGACTGATGGATCTAGCAGTGTGGCCATCTGCCCACGCTGCAGCAAAAAGGTCAACTGTTTGATCCTTACCACCGCCACACCCTCTGACTGTGAATTCATTAATTTTGGATGCCTGGATTATACATGTACATTTTAGGTTACTCTGCTTTTAGCTAAAGACCGAAATGCTTTAATATGTGTTAGATATTGCAGAGTACAATCTCGCCTGTTTTTAATCTGAGAAAAACTCCATCAACTAGTGACTCCACGCCATTATGTGCCAAGTGGCTGCCCAGAAATCAaaactttatttcattttttttactttaatttttaatttttcagaCTGTTGAGTATTTGCTTCTGTATTGAATGTTCACTCCGAAGGTGAATGAAGTTATGTATTGGTTTGCACAGCTATCCTAAAGgttaaaagtgttaaaaacGACCTGGATGACCTGGATTAAACAGTAAgggagaccacacacacacacacacacacacacacctccacgaCACAACAGCTtattgtttgtctctgtgtgtggtctTTCAACTATTGGATCCCTCATCAAAAAGACTTCAAGGTTTTAAGACATCCAAAGCACCATTTCAAAGATCCAGAGTTAATCCATACTAGGTGAAAATGGTTGCTTGAGATTTTTGATGTTATTTTATACACATTCACGCTTGTATTCTAGCCAGTGTAACTGAATCTGCCTTAATCCCTCACTTGAAGTGTTATATGGTTTTCACAAGCAGACTGAACATTTTAGAGTTTTTAATGAAGCATTATTTTAGTGTCTACGCTACCTTACAGAAACCCTCAAAACACAGAAACTGCATTTATTGTCCCTGTGTCTGGAAACGGGACTTGTGTTTGATGTTTTAAATCTCAGAAACGCCAGAaaggaggtcaaaggtcactacCTTGTGGAATCAATTTTTATTTGGAGGGACAG

Function

NR:

description
PREDICTED: frizzled-7-A-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0060027 convergent extension involved in gastrulation biological_process
GO:0090504 epiboly biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0042813 Wnt-activated receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K02432 FZD1_7, fz; frizzled 1/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818574.1 True 3566 mRNA 0.48 1 11928001 11931566

Neighbor

gene id symbol gene type direction distance location
chpfa chpf coding downstream 74762 11847489 ~ 11853239 (-)
LOC120569666 LOC101066695,LOC103353973,LOC100702988,LOC104967496 coding downstream 340928 11581030 ~ 11587073 (-)
LOC120570648 hnmt,LOC107099306 coding downstream 651295 11270196 ~ 11276706 (-)
LOC120570649 NA coding downstream 659149 11262358 ~ 11268852 (-)
LOC120569285 LOC104963990 coding downstream 691242 11228607 ~ 11236759 (-)
LOC120569817 tsc22d1,LOC104964899,LOC108240410 coding upstream 83207 12014773 ~ 12023501 (-)
LOC120569816 LOC103392286 coding upstream 114940 12046506 ~ 12050719 (-)
kctd4 kctd4,LOC104957956 coding upstream 153457 12085023 ~ 12087014 (-)
tpt1 NA coding upstream 182486 12114052 ~ 12120122 (-)
ranbp2 ranbp2 coding upstream 187277 12118843 ~ 12147658 (-)
G123348 agpat3 non-coding downstream 28831 11877339 ~ 11899170 (-)
G123341 NA non-coding downstream 80618 11845610 ~ 11847383 (-)
G123340 NA non-coding downstream 82529 11843330 ~ 11845472 (-)
G123310 NA non-coding downstream 328499 11597946 ~ 11599502 (-)
LOC120569667 NA non-coding downstream 331295 11593181 ~ 11596706 (-)
G123356 NA non-coding upstream 22357 11953923 ~ 11956600 (-)
G123369 NA non-coding upstream 73309 12004875 ~ 12006402 (-)
G123480 NA non-coding upstream 687470 12619036 ~ 12619284 (-)
LOC120569379 NA non-coding upstream 954903 12886469 ~ 12889147 (-)
G123580 NA non-coding upstream 1084785 13016351 ~ 13016738 (-)
thsd7ba NA other downstream 460062 11280610 ~ 11467939 (-)
stxbp5l stxbp5l other downstream 833382 10940053 ~ 11094619 (-)
G122878 NA other downstream 2927878 8999462 ~ 9000123 (-)
ccnt2a ccnt2,ccnt2a,LOC104923135,LOC102200362 other downstream 3124897 8793621 ~ 8803104 (-)
traf3ip1 traf3ip1 other downstream 3479571 8399585 ~ 8448430 (-)
LOC120570668 LOC103354235,LOC105936145,LOC100692075,LOC108240393,LOC104918665 other upstream 300854 12232420 ~ 12245005 (-)
G123481 LOC106675207,LOC106674584,LOC106676400,LOC106674915,LOC106675345,LOC106676354,LOC106674636 other upstream 687787 12619353 ~ 12619815 (-)
ikzf2 ikzf2 other upstream 2244248 14175814 ~ 14201729 (-)
G123886 NA other upstream 2852995 14784561 ~ 14794497 (-)
G123960 NA other upstream 3052919 14984485 ~ 14993789 (-)

Expression


Co-expression Network